RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 IRF6O14896 467 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 TBC1D12O60347 775 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 GLRX3O76003 335 aaKnown RBP14.29□□□□□ -0.12
RAB5C-204ENST00000547517 MBD4O95243 580 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 TBC1D8O95759 1140 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 IGHDP01880 384 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 HLA-DOAP06340 250 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 GTF2A2P52657 109 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 INHBEP58166 350 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 MAP3K10Q02779 954 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 CCL15Q16663 113 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 B4GALNT3Q6L9W6 998 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 SMC5Q8IY18 1101 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 CRACR2BQ8N4Y2 399 aaPredicted RBP14.29□□□□□ -0.12
RAB5C-204ENST00000547517 BRI3BPQ8WY22 251 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 MS4A4AQ96JQ5 239 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 CRNKL1Q9BZJ0 848 aaKnown RBP14.29□□□□□ -0.12
RAB5C-204ENST00000547517 LNPKQ9C0E8 428 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 ARMT1Q9H993 441 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.29□□□□□ -0.12
RAB5C-204ENST00000547517 PI4KBQ9UBF8 816 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 SALL3Q9BXA9 1300 aa14.29□□□□□ -0.12
RAB5C-204ENST00000547517 MYH1P12882 1939 aa14.28□□□□□ -0.12
RAB5C-204ENST00000547517 PPATQ06203 517 aa14.28□□□□□ -0.12
RAB5C-204ENST00000547517 SNAPC2Q13487 334 aa14.28□□□□□ -0.12
RAB5C-204ENST00000547517 ZSCAN25Q6NSZ9 544 aa14.28□□□□□ -0.12
RAB5C-204ENST00000547517 KBTBD3Q8NAB2 608 aa14.28□□□□□ -0.12
RAB5C-204ENST00000547517 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
RAB5C-204ENST00000547517 PTPN18Q99952 460 aa14.28□□□□□ -0.12
RAB5C-204ENST00000547517 HERC5Q9UII4 1024 aaKnown RBP14.28□□□□□ -0.12
RAB5C-204ENST00000547517 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.12
RAB5C-204ENST00000547517 TESPA1A2RU30 521 aaPredicted RBP14.27□□□□□ -0.13
RAB5C-204ENST00000547517 CTNND1O60716 968 aaKnown RBP14.27□□□□□ -0.13
RAB5C-204ENST00000547517 ALDH1A1P00352 501 aa14.27□□□□□ -0.13
RAB5C-204ENST00000547517 UBE3CQ15386 1083 aa14.27□□□□□ -0.13
RAB5C-204ENST00000547517 CCDC84Q86UT8 332 aaPredicted RBP14.27□□□□□ -0.13
RAB5C-204ENST00000547517 DNAJC18Q9H819 358 aa14.27□□□□□ -0.13
RAB5C-204ENST00000547517 CETPP11597 493 aa14.26□□□□□ -0.13
RAB5C-204ENST00000547517 PTPRAP18433 802 aa14.26□□□□□ -0.13
RAB5C-204ENST00000547517 RRP1BQ14684 758 aaKnown RBP14.26□□□□□ -0.13
RAB5C-204ENST00000547517 OTUD7BQ6GQQ9 843 aa14.26□□□□□ -0.13
RAB5C-204ENST00000547517 FAM43AQ8N2R8 423 aa14.26□□□□□ -0.13
RAB5C-204ENST00000547517 FSD1Q9BTV5 496 aa14.26□□□□□ -0.13
RAB5C-204ENST00000547517 ZHX2Q9Y6X8 837 aa14.26□□□□□ -0.13
RAB5C-204ENST00000547517 CASP8AP2Q9UKL3 1982 aa14.25□□□□□ -0.13
RAB5C-204ENST00000547517 PRKAB2O43741 272 aa14.25□□□□□ -0.13
RAB5C-204ENST00000547517 POLR3DP05423 398 aaPredicted RBP14.25□□□□□ -0.13
RAB5C-204ENST00000547517 CAP2P40123 477 aa14.25□□□□□ -0.13
RAB5C-204ENST00000547517 PDE1AP54750 535 aa14.25□□□□□ -0.13
RAB5C-204ENST00000547517 CRHR2Q13324 411 aa14.25□□□□□ -0.13
RAB5C-204ENST00000547517 CHD1LQ86WJ1 897 aa14.25□□□□□ -0.13
RAB5C-204ENST00000547517 PUS7LQ9H0K6 701 aaKnown RBP14.25□□□□□ -0.13
RAB5C-204ENST00000547517 R3HDMLQ9H3Y0 253 aa14.25□□□□□ -0.13
RAB5C-204ENST00000547517 DCP1AQ9NPI6 582 aaPredicted RBP14.25□□□□□ -0.13
RAB5C-204ENST00000547517 MCM9Q9NXL9 1143 aa14.25□□□□□ -0.13
RAB5C-204ENST00000547517 KCNH4Q9UQ05 1017 aa14.25□□□□□ -0.13
RAB5C-204ENST00000547517 TRIM75PA6NK02 468 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 BTBD19C9JJ37 291 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 RNF113AO15541 343 aaKnown RBP14.24□□□□□ -0.13
RAB5C-204ENST00000547517 GDF11O95390 407 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 ZFYP08048 801 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-204ENST00000547517 NUCB1Q02818 461 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 TAF1CQ15572 869 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-204ENST00000547517 TTC6Q86TZ1 520 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 METTL16Q86W50 562 aaKnown RBP14.24□□□□□ -0.13
RAB5C-204ENST00000547517 FOXP4Q8IVH2 680 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-204ENST00000547517 ZNF296Q8WUU4 475 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-204ENST00000547517 APPBP2Q92624 585 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 CFHR5Q9BXR6 569 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 EHD4Q9H223 541 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 STAP2Q9UGK3 403 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 SERPINB13Q9UIV8 391 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 PHIPQ8WWQ0 1821 aa14.24□□□□□ -0.13
RAB5C-204ENST00000547517 GPR25O00155 361 aa14.23□□□□□ -0.13
RAB5C-204ENST00000547517 CYP2D6P10635 497 aa14.23□□□□□ -0.13
RAB5C-204ENST00000547517 PLCD1P51178 756 aa14.23□□□□□ -0.13
RAB5C-204ENST00000547517 EVX2Q03828 476 aa14.23□□□□□ -0.13
RAB5C-204ENST00000547517 SHROOM1Q2M3G4 852 aaPredicted RBP14.23□□□□□ -0.13
RAB5C-204ENST00000547517 LRRFIP1Q32MZ4 808 aaKnown RBP14.23□□□□□ -0.13
RAB5C-204ENST00000547517 OSBP2Q969R2 916 aa14.23□□□□□ -0.13
RAB5C-204ENST00000547517 AFG3L2Q9Y4W6 797 aa14.23□□□□□ -0.13
RAB5C-204ENST00000547517 SLC4A4Q9Y6R1 1079 aa14.23□□□□□ -0.13
RAB5C-204ENST00000547517 BAZ2AQ9UIF9 1905 aaKnown RBP14.22□□□□□ -0.13
RAB5C-204ENST00000547517 A0A0G2JLL6 359 aaPredicted RBP14.22□□□□□ -0.13
RAB5C-204ENST00000547517 M0R2C6 588 aa14.22□□□□□ -0.13
RAB5C-204ENST00000547517 CXCL11O14625 94 aa14.22□□□□□ -0.13
RAB5C-204ENST00000547517 JAG1P78504 1218 aa14.22□□□□□ -0.13
RAB5C-204ENST00000547517 PRRT2Q7Z6L0 340 aaPredicted RBP14.22□□□□□ -0.13
RAB5C-204ENST00000547517 DDRGK1Q96HY6 314 aa14.22□□□□□ -0.13
RAB5C-204ENST00000547517 ATP8A2Q9NTI2 1148 aa14.22□□□□□ -0.13
RAB5C-204ENST00000547517 ZBTB21Q9ULJ3 1066 aa14.22□□□□□ -0.13
RAB5C-204ENST00000547517 PTPRFP10586 1907 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 USP17L5A8MUK1 530 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 GPAA1O43292 621 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 FKTNO75072 461 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 ASNSP08243 561 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 DGKZQ13574 1117 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 MOGSQ13724 837 aa14.21□□□□□ -0.13
RAB5C-204ENST00000547517 NOM1Q5C9Z4 860 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms