RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 ERO1AQ96HE7 468 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 ZFYVE28Q9HCC9 887 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 IL1RAPL2Q9NP60 686 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
BEST3-208ENST00000547208 TRIM17Q9Y577 477 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 FAM196BA6NMK8 535 aa12.61□□□□□ -0.39
BEST3-208ENST00000547208 TLR2O60603 784 aa12.61□□□□□ -0.39
BEST3-208ENST00000547208 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
BEST3-208ENST00000547208 PTPRAP18433 802 aa12.61□□□□□ -0.39
BEST3-208ENST00000547208 PDE3AQ14432 1141 aa12.61□□□□□ -0.39
BEST3-208ENST00000547208 ANKRD23Q86SG2 305 aa12.61□□□□□ -0.39
BEST3-208ENST00000547208 TEX11Q8IYF3 940 aa12.61□□□□□ -0.39
BEST3-208ENST00000547208 ANTXR1Q9H6X2 564 aa12.61□□□□□ -0.39
BEST3-208ENST00000547208 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.61□□□□□ -0.39
BEST3-208ENST00000547208 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
BEST3-208ENST00000547208 SZT2Q5T011 3432 aa12.61□□□□□ -0.39
BEST3-208ENST00000547208 MYH8P13535 1937 aa12.6□□□□□ -0.39
BEST3-208ENST00000547208 CXCL11O14625 94 aa12.6□□□□□ -0.39
BEST3-208ENST00000547208 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
BEST3-208ENST00000547208 HSP90AB4PQ58FF6 505 aa12.6□□□□□ -0.39
BEST3-208ENST00000547208 GPAT2Q6NUI2 795 aa12.6□□□□□ -0.39
BEST3-208ENST00000547208 PTPN22Q9Y2R2 807 aa12.6□□□□□ -0.39
BEST3-208ENST00000547208 ZHX2Q9Y6X8 837 aa12.6□□□□□ -0.39
BEST3-208ENST00000547208 FLT1P17948 1338 aa12.6□□□□□ -0.39
BEST3-208ENST00000547208 DOCK3Q8IZD9 2030 aa12.59□□□□□ -0.39
BEST3-208ENST00000547208 BAZ2AQ9UIF9 1905 aaKnown RBP12.59□□□□□ -0.39
BEST3-208ENST00000547208 A0A0G2JLL6 359 aaPredicted RBP12.59□□□□□ -0.39
BEST3-208ENST00000547208 PDHXO00330 501 aa12.59□□□□□ -0.39
BEST3-208ENST00000547208 BAG3O95817 575 aa12.59□□□□□ -0.39
BEST3-208ENST00000547208 PLCG2P16885 1265 aa12.59□□□□□ -0.39
BEST3-208ENST00000547208 HABP4Q5JVS0 413 aaKnown RBP12.59□□□□□ -0.39
BEST3-208ENST00000547208 C17orf99Q6UX52 265 aa12.59□□□□□ -0.39
BEST3-208ENST00000547208 PRRT2Q7Z6L0 340 aaPredicted RBP12.59□□□□□ -0.39
BEST3-208ENST00000547208 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
BEST3-208ENST00000547208 KIF1BPQ96EK5 621 aa12.59□□□□□ -0.39
BEST3-208ENST00000547208 ARHGAP39Q9C0H5 1083 aa12.59□□□□□ -0.39
BEST3-208ENST00000547208 EFCC1Q9HA90 598 aa12.59□□□□□ -0.39
BEST3-208ENST00000547208 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.39
BEST3-208ENST00000547208 APBB1O00213 710 aa12.58□□□□□ -0.4
BEST3-208ENST00000547208 HMMRO75330 724 aa12.58□□□□□ -0.4
BEST3-208ENST00000547208 IDH1O75874 414 aaKnown RBP12.58□□□□□ -0.4
BEST3-208ENST00000547208 CTGFP29279 349 aa12.58□□□□□ -0.4
BEST3-208ENST00000547208 DYNLL1P63167 89 aaKnown RBP12.58□□□□□ -0.4
BEST3-208ENST00000547208 METTL16Q86W50 562 aaKnown RBP12.58□□□□□ -0.4
BEST3-208ENST00000547208 MAGEB6Q8N7X4 407 aa12.58□□□□□ -0.4
BEST3-208ENST00000547208 TGFBRAP1Q8WUH2 860 aa12.58□□□□□ -0.4
BEST3-208ENST00000547208 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
BEST3-208ENST00000547208 DNAJC18Q9H819 358 aa12.58□□□□□ -0.4
BEST3-208ENST00000547208 PICK1Q9NRD5 415 aa12.58□□□□□ -0.4
BEST3-208ENST00000547208 HERC5Q9UII4 1024 aaKnown RBP12.58□□□□□ -0.4
BEST3-208ENST00000547208 RAB11FIP3O75154 756 aa12.57□□□□□ -0.4
BEST3-208ENST00000547208 CYP7A1P22680 504 aa12.57□□□□□ -0.4
BEST3-208ENST00000547208 LACTBP83111 547 aaPredicted RBP12.57□□□□□ -0.4
BEST3-208ENST00000547208 MAPKAPK5Q8IW41 473 aa12.57□□□□□ -0.4
BEST3-208ENST00000547208 CLASRPQ8N2M8 674 aaKnown RBP12.57□□□□□ -0.4
BEST3-208ENST00000547208 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.57□□□□□ -0.4
BEST3-208ENST00000547208 DHX36Q9H2U1 1008 aaKnown RBP12.57□□□□□ -0.4
BEST3-208ENST00000547208 CHMP4BQ9H444 224 aaKnown RBP12.57□□□□□ -0.4
BEST3-208ENST00000547208 PI4KBQ9UBF8 816 aa12.57□□□□□ -0.4
BEST3-208ENST00000547208 EN2P19622 333 aaPredicted RBP12.56□□□□□ -0.4
BEST3-208ENST00000547208 CAP2P40123 477 aa12.56□□□□□ -0.4
BEST3-208ENST00000547208 JAG1P78504 1218 aa12.56□□□□□ -0.4
BEST3-208ENST00000547208 TMED8Q6PL24 325 aaPredicted RBP12.56□□□□□ -0.4
BEST3-208ENST00000547208 MIGA1Q8NAN2 632 aa12.56□□□□□ -0.4
BEST3-208ENST00000547208 ARMC5Q96C12 935 aa12.56□□□□□ -0.4
BEST3-208ENST00000547208 RIOK1Q9BRS2 568 aaKnown RBP12.56□□□□□ -0.4
BEST3-208ENST00000547208 CPA4Q9UI42 421 aa12.56□□□□□ -0.4
BEST3-208ENST00000547208 PALD1Q9ULE6 856 aa12.56□□□□□ -0.4
BEST3-208ENST00000547208 SLC45A1Q9Y2W3 748 aa12.56□□□□□ -0.4
BEST3-208ENST00000547208 PLXNB2O15031 1838 aa12.55□□□□□ -0.4
BEST3-208ENST00000547208 TRIM75PA6NK02 468 aa12.55□□□□□ -0.4
BEST3-208ENST00000547208 CYP2C8P10632 490 aa12.55□□□□□ -0.4
BEST3-208ENST00000547208 BCRP11274 1271 aa12.55□□□□□ -0.4
BEST3-208ENST00000547208 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
BEST3-208ENST00000547208 SHROOM1Q2M3G4 852 aaPredicted RBP12.55□□□□□ -0.4
BEST3-208ENST00000547208 FASTKD5Q7L8L6 764 aaKnown RBP12.55□□□□□ -0.4
BEST3-208ENST00000547208 PARK7Q99497 189 aaKnown RBP12.55□□□□□ -0.4
BEST3-208ENST00000547208 PTCH2Q9Y6C5 1203 aa12.55□□□□□ -0.4
BEST3-208ENST00000547208 TRIOBPQ9H2D6 2365 aa12.54□□□□□ -0.4
BEST3-208ENST00000547208 TCRBV5S4A2TA0A5A2 114 aa12.54□□□□□ -0.4
BEST3-208ENST00000547208 IFIT2P09913 472 aaKnown RBP12.54□□□□□ -0.4
BEST3-208ENST00000547208 PDE6AP16499 860 aa12.54□□□□□ -0.4
BEST3-208ENST00000547208 FXR1P51114 621 aaKnown RBP eCLIP12.54□□□□□ -0.4
BEST3-208ENST00000547208 TTF1Q15361 905 aaPredicted RBP12.54□□□□□ -0.4
BEST3-208ENST00000547208 TREML2Q5T2D2 321 aa12.54□□□□□ -0.4
BEST3-208ENST00000547208 GADL1Q6ZQY3 521 aa12.54□□□□□ -0.4
BEST3-208ENST00000547208 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
BEST3-208ENST00000547208 FOXP4Q8IVH2 680 aaPredicted RBP12.54□□□□□ -0.4
BEST3-208ENST00000547208 EDC3Q96F86 508 aaKnown RBP12.54□□□□□ -0.4
BEST3-208ENST00000547208 TRIM47Q96LD4 638 aa12.54□□□□□ -0.4
BEST3-208ENST00000547208 SAP30BPQ9UHR5 308 aaKnown RBP12.54□□□□□ -0.4
BEST3-208ENST00000547208 AGTPBP1Q9UPW5 1226 aa12.54□□□□□ -0.4
BEST3-208ENST00000547208 CEP290O15078 2479 aa12.54□□□□□ -0.4
BEST3-208ENST00000547208 GOLIM4O00461 696 aa12.53□□□□□ -0.4
BEST3-208ENST00000547208 GNRH1P01148 92 aa12.53□□□□□ -0.4
BEST3-208ENST00000547208 ATP5JP18859 108 aa12.53□□□□□ -0.4
BEST3-208ENST00000547208 SPP2Q13103 211 aa12.53□□□□□ -0.4
BEST3-208ENST00000547208 ARHGEF6Q15052 776 aa12.53□□□□□ -0.4
BEST3-208ENST00000547208 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms