RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 PXYLP1Q8TE99 480 aa16.35■□□□□ 0.21
RAB5B-203ENST00000546810 TEKT1Q969V4 418 aa16.35■□□□□ 0.21
RAB5B-203ENST00000546810 IL1RAPL2Q9NP60 686 aa16.35■□□□□ 0.21
RAB5B-203ENST00000546810 PAK6Q9NQU5 681 aaPredicted RBP16.35■□□□□ 0.21
RAB5B-203ENST00000546810 DENND2AQ9ULE3 1009 aa16.35■□□□□ 0.21
RAB5B-203ENST00000546810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.35■□□□□ 0.21
RAB5B-203ENST00000546810 UQCRFS1P1P0C7P4 283 aa16.34■□□□□ 0.21
RAB5B-203ENST00000546810 TTC39AQ5SRH9 613 aa16.34■□□□□ 0.21
RAB5B-203ENST00000546810 FKBP1CQ5VVH2 108 aa16.34■□□□□ 0.21
RAB5B-203ENST00000546810 TDHQ8IZJ6 230 aa16.34■□□□□ 0.21
RAB5B-203ENST00000546810 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
RAB5B-203ENST00000546810 TBC1D22AQ8WUA7 517 aa16.34■□□□□ 0.21
RAB5B-203ENST00000546810 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
RAB5B-203ENST00000546810 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
RAB5B-203ENST00000546810 RPAP1Q9BWH6 1393 aaPredicted RBP16.34■□□□□ 0.21
RAB5B-203ENST00000546810 ZBTB22O15209 634 aa16.33■□□□□ 0.2
RAB5B-203ENST00000546810 PHKA1P46020 1223 aa16.33■□□□□ 0.2
RAB5B-203ENST00000546810 CHAF1AQ13111 956 aaPredicted RBP16.33■□□□□ 0.2
RAB5B-203ENST00000546810 IRF5Q13568 498 aa16.33■□□□□ 0.2
RAB5B-203ENST00000546810 GPAT2Q6NUI2 795 aa16.33■□□□□ 0.2
RAB5B-203ENST00000546810 WDR66Q8TBY9 1149 aa16.33■□□□□ 0.2
RAB5B-203ENST00000546810 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
RAB5B-203ENST00000546810 DBNDD2Q9BQY9 259 aa16.33■□□□□ 0.2
RAB5B-203ENST00000546810 BCL11AQ9H165 835 aa16.33■□□□□ 0.2
RAB5B-203ENST00000546810 IQSEC3Q9UPP2 1182 aaPredicted RBP16.33■□□□□ 0.2
RAB5B-203ENST00000546810 TNPO2O14787 897 aaKnown RBP16.32■□□□□ 0.2
RAB5B-203ENST00000546810 SYN1P17600 705 aa16.32■□□□□ 0.2
RAB5B-203ENST00000546810 MAGEA10P43363 369 aaPredicted RBP16.32■□□□□ 0.2
RAB5B-203ENST00000546810 ZNF112Q9UJU3 913 aa16.32■□□□□ 0.2
RAB5B-203ENST00000546810 CXCL11O14625 94 aa16.31■□□□□ 0.2
RAB5B-203ENST00000546810 APOBEC3HQ6NTF7 200 aaKnown RBP16.31■□□□□ 0.2
RAB5B-203ENST00000546810 ZGPATQ8N5A5 531 aaKnown RBP16.31■□□□□ 0.2
RAB5B-203ENST00000546810 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
RAB5B-203ENST00000546810 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.31■□□□□ 0.2
RAB5B-203ENST00000546810 DBNLQ9UJU6 430 aaKnown RBP16.31■□□□□ 0.2
RAB5B-203ENST00000546810 TAOK2Q9UL54 1235 aa16.31■□□□□ 0.2
RAB5B-203ENST00000546810 UNC80Q8N2C7 3258 aa16.31■□□□□ 0.2
RAB5B-203ENST00000546810 PDS5AQ29RF7 1337 aaKnown RBP16.3■□□□□ 0.2
RAB5B-203ENST00000546810 ALPK3Q96L96 1907 aa16.3■□□□□ 0.2
RAB5B-203ENST00000546810 ARID4AP29374 1257 aaPredicted RBP16.3■□□□□ 0.2
RAB5B-203ENST00000546810 NOL9Q5SY16 702 aaKnown RBP16.3■□□□□ 0.2
RAB5B-203ENST00000546810 ANKRD45Q5TZF3 282 aa16.3■□□□□ 0.2
RAB5B-203ENST00000546810 ANKLE1Q8NAG6 615 aa16.3■□□□□ 0.2
RAB5B-203ENST00000546810 GPATCH3Q96I76 525 aa16.3■□□□□ 0.2
RAB5B-203ENST00000546810 ZNF512BQ96KM6 892 aaPredicted RBP16.3■□□□□ 0.2
RAB5B-203ENST00000546810 UBE2OQ9C0C9 1292 aaKnown RBP16.3■□□□□ 0.2
RAB5B-203ENST00000546810 RPTORQ8N122 1335 aa16.29■□□□□ 0.2
RAB5B-203ENST00000546810 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
RAB5B-203ENST00000546810 IGHDP01880 384 aa16.29■□□□□ 0.2
RAB5B-203ENST00000546810 RASGRF1Q13972 1273 aa16.29■□□□□ 0.2
RAB5B-203ENST00000546810 SMC5Q8IY18 1101 aa16.29■□□□□ 0.2
RAB5B-203ENST00000546810 FAM151AQ8WW52 585 aa16.29■□□□□ 0.2
RAB5B-203ENST00000546810 NBPF3Q9H094 633 aa16.29■□□□□ 0.2
RAB5B-203ENST00000546810 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
RAB5B-203ENST00000546810 SUGT1Q9Y2Z0 365 aa16.29■□□□□ 0.2
RAB5B-203ENST00000546810 MGAMO43451 1857 aa16.29■□□□□ 0.2
RAB5B-203ENST00000546810 MAST3O60307 1309 aa16.28■□□□□ 0.2
RAB5B-203ENST00000546810 ERICH6BQ5W0A0 696 aa16.28■□□□□ 0.2
RAB5B-203ENST00000546810 SPTY2D1Q68D10 685 aaPredicted RBP16.28■□□□□ 0.2
RAB5B-203ENST00000546810 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
RAB5B-203ENST00000546810 SPATA5Q8NB90 893 aa16.28■□□□□ 0.2
RAB5B-203ENST00000546810 SALL1Q9NSC2 1324 aa16.27■□□□□ 0.2
RAB5B-203ENST00000546810 HHIPL2Q6UWX4 724 aa16.27■□□□□ 0.2
RAB5B-203ENST00000546810 COA7Q96BR5 231 aa16.27■□□□□ 0.2
RAB5B-203ENST00000546810 HMG20BQ9P0W2 317 aa16.27■□□□□ 0.2
RAB5B-203ENST00000546810 A0A0G2JLL6 359 aaPredicted RBP16.26■□□□□ 0.19
RAB5B-203ENST00000546810 MCAMP43121 646 aa16.26■□□□□ 0.19
RAB5B-203ENST00000546810 TCP10Q12799 353 aa16.26■□□□□ 0.19
RAB5B-203ENST00000546810 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
RAB5B-203ENST00000546810 PRRT2Q7Z6L0 340 aaPredicted RBP16.26■□□□□ 0.19
RAB5B-203ENST00000546810 SMCR8Q8TEV9 937 aaPredicted RBP16.26■□□□□ 0.19
RAB5B-203ENST00000546810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.26■□□□□ 0.19
RAB5B-203ENST00000546810 C11orf49Q9H6J7 331 aa16.26■□□□□ 0.19
RAB5B-203ENST00000546810 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
RAB5B-203ENST00000546810 LDHBP07195 334 aaKnown RBP16.25■□□□□ 0.19
RAB5B-203ENST00000546810 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
RAB5B-203ENST00000546810 GUCD1Q96NT3 240 aa16.25■□□□□ 0.19
RAB5B-203ENST00000546810 PRDM6Q9NQX0 595 aa16.25■□□□□ 0.19
RAB5B-203ENST00000546810 ECHDC1Q9NTX5 307 aa16.25■□□□□ 0.19
RAB5B-203ENST00000546810 ABCF2Q9UG63 623 aa16.25■□□□□ 0.19
RAB5B-203ENST00000546810 ZHX2Q9Y6X8 837 aa16.25■□□□□ 0.19
RAB5B-203ENST00000546810 IGSF3O75054 1194 aa16.24■□□□□ 0.19
RAB5B-203ENST00000546810 HMGCRP04035 888 aa16.24■□□□□ 0.19
RAB5B-203ENST00000546810 ATP5JP18859 108 aa16.24■□□□□ 0.19
RAB5B-203ENST00000546810 FAM109BQ6ICB4 259 aaPredicted RBP16.24■□□□□ 0.19
RAB5B-203ENST00000546810 ERICH6Q7L0X2 663 aa16.24■□□□□ 0.19
RAB5B-203ENST00000546810 CHD1LQ86WJ1 897 aa16.24■□□□□ 0.19
RAB5B-203ENST00000546810 SLF2Q8IX21 1173 aa16.24■□□□□ 0.19
RAB5B-203ENST00000546810 TTC41PQ6P2S7 1318 aa16.23■□□□□ 0.19
RAB5B-203ENST00000546810 POTEB2H3BUK9 544 aa16.23■□□□□ 0.19
RAB5B-203ENST00000546810 ERC2O15083 957 aa16.23■□□□□ 0.19
RAB5B-203ENST00000546810 NUCB1Q02818 461 aa16.23■□□□□ 0.19
RAB5B-203ENST00000546810 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
RAB5B-203ENST00000546810 DZIP1Q86YF9 867 aaKnown RBP16.23■□□□□ 0.19
RAB5B-203ENST00000546810 SCYL3Q8IZE3 742 aa16.23■□□□□ 0.19
RAB5B-203ENST00000546810 ANKRD13CQ8N6S4 541 aa16.23■□□□□ 0.19
RAB5B-203ENST00000546810 CCDC136Q96JN2 1154 aa16.23■□□□□ 0.19
RAB5B-203ENST00000546810 HMX1Q9NP08 348 aaPredicted RBP16.23■□□□□ 0.19
RAB5B-203ENST00000546810 PICK1Q9NRD5 415 aa16.23■□□□□ 0.19
RAB5B-203ENST00000546810 SNRKQ9NRH2 765 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms