RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 RHOXF2BP0C7M4 288 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 UQCRFS1P1P0C7P4 283 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 ZNF444Q8N0Y2 327 aaPredicted RBP11.16□□□□□ -0.62
TRAF1-203ENST00000546084 RHOXF2Q9BQY4 288 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 SRP68Q9UHB9 627 aaKnown RBP11.16□□□□□ -0.62
TRAF1-203ENST00000546084 PCDHB6Q9Y5E3 794 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 TRIM75PA6NK02 468 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 CDC25BP30305 580 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 ARID5AQ03989 594 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 GRIN1Q05586 938 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 SYCP1Q15431 976 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 TERF2Q15554 542 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 CCDC178Q5BJE1 867 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 TAF3Q5VWG9 929 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 ADALQ6DHV7 355 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 GIGYF2Q6Y7W6 1299 aaKnown RBP11.16□□□□□ -0.62
TRAF1-203ENST00000546084 DHX40Q8IX18 779 aaKnown RBP11.16□□□□□ -0.62
TRAF1-203ENST00000546084 KRI1Q8N9T8 703 aaKnown RBP11.16□□□□□ -0.62
TRAF1-203ENST00000546084 EPSTI1Q96J88 318 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 CAPZA3Q96KX2 299 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 WDHD1O75717 1129 aaPredicted RBP11.16□□□□□ -0.62
TRAF1-203ENST00000546084 FDPSP14324 419 aaKnown RBP11.16□□□□□ -0.62
TRAF1-203ENST00000546084 CCZ1BP86790 482 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 CCZ1P86791 482 aaPredicted RBP11.16□□□□□ -0.62
TRAF1-203ENST00000546084 PTPROQ16827 1216 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 CCDC150Q8NCX0 1101 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 CDK5RAP3Q96JB5 506 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 ADGRL3Q9HAR2 1447 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 CASQ1P31415 396 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 CHRNDQ07001 517 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 SARM1Q6SZW1 724 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 RBM43Q6ZSC3 357 aaKnown RBP11.15□□□□□ -0.62
TRAF1-203ENST00000546084 CDC5LQ99459 802 aaKnown RBP11.15□□□□□ -0.62
TRAF1-203ENST00000546084 LLPHQ9BRT6 129 aaKnown RBP11.15□□□□□ -0.62
TRAF1-203ENST00000546084 NPHP4O75161 1426 aaPredicted RBP11.15□□□□□ -0.62
TRAF1-203ENST00000546084 CCDC196A0A1B0GTZ2 297 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 CYP2D6P10635 497 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 TXLNAP40222 546 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 MYL5Q02045 173 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 KIF23Q02241 960 aaPredicted RBP11.15□□□□□ -0.62
TRAF1-203ENST00000546084 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 MAPKAPK5Q8IW41 473 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 LPIN2Q92539 896 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 CCDC102AQ96A19 550 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 SETDB2Q96T68 719 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.62
TRAF1-203ENST00000546084 UBA5Q9GZZ9 404 aa11.15□□□□□ -0.62
TRAF1-203ENST00000546084 MORC2Q9Y6X9 1032 aaPredicted RBP11.15□□□□□ -0.62
TRAF1-203ENST00000546084 TNKSO95271 1327 aa11.15□□□□□ -0.63
TRAF1-203ENST00000546084 UBA7P41226 1012 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 ZNF654Q8IZM8 581 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 DPF2Q92785 391 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 PPP1R13BQ96KQ4 1090 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 KAT14Q9H8E8 782 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 SAMSN1Q9NSI8 373 aaKnown RBP11.14□□□□□ -0.63
TRAF1-203ENST00000546084 WDR17Q8IZU2 1322 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 CBFA2T2O43439 604 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 CRKLP46109 303 aaKnown RBP11.14□□□□□ -0.63
TRAF1-203ENST00000546084 RBM6P78332 1123 aaKnown RBP11.14□□□□□ -0.63
TRAF1-203ENST00000546084 WASF1Q92558 559 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 ZNF622Q969S3 477 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRAF1-203ENST00000546084 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
TRAF1-203ENST00000546084 PXDNLA1KZ92 1463 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 MAP3K15Q6ZN16 1313 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 PCCAP05165 728 aaPredicted RBP11.14□□□□□ -0.63
TRAF1-203ENST00000546084 KRT18P05783 430 aaKnown RBP11.14□□□□□ -0.63
TRAF1-203ENST00000546084 SLFN14P0C7P3 912 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 DIXDC1Q155Q3 683 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 TIGD1Q96MW7 591 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 NLRP3Q96P20 1036 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 TAB2Q9NYJ8 693 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 MAGEC2Q9UBF1 373 aaPredicted RBP11.14□□□□□ -0.63
TRAF1-203ENST00000546084 GUCA1BQ9UMX6 200 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 CTNND2Q9UQB3 1225 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 COL15A1P39059 1388 aa11.14□□□□□ -0.63
TRAF1-203ENST00000546084 ADD2P35612 726 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
TRAF1-203ENST00000546084 LETM2Q2VYF4 491 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 SPTY2D1Q68D10 685 aaPredicted RBP11.13□□□□□ -0.63
TRAF1-203ENST00000546084 DYNLL2Q96FJ2 89 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
TRAF1-203ENST00000546084 KRT23Q9C075 422 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 TMX4Q9H1E5 349 aaPredicted RBP11.13□□□□□ -0.63
TRAF1-203ENST00000546084 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 TSPY3P0CV98 308 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 TSPY8P0CW00 308 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 RNASE9P60153 205 aaKnown RBP11.13□□□□□ -0.63
TRAF1-203ENST00000546084 NOM1Q5C9Z4 860 aaKnown RBP11.13□□□□□ -0.63
TRAF1-203ENST00000546084 SOGA3Q5TF21 947 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 NYAP1Q6ZVC0 841 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 CENPHQ9H3R5 247 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 DEF6Q9H4E7 631 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 RNF41Q9H4P4 317 aaPredicted RBP11.13□□□□□ -0.63
TRAF1-203ENST00000546084 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRAF1-203ENST00000546084 MED23Q9ULK4 1368 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 PLEKHA8P1O95397 391 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 ANTXR2P58335 489 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 CCDC96Q2M329 555 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 E4F1Q66K89 784 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms