RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 CRACR2BQ8N4Y2 399 aaPredicted RBP16.01■□□□□ 0.15
LSM14A-203ENST00000544216 MYRIPQ8NFW9 859 aa16.01■□□□□ 0.15
LSM14A-203ENST00000544216 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
LSM14A-203ENST00000544216 KCNH3Q9ULD8 1083 aa16.01■□□□□ 0.15
LSM14A-203ENST00000544216 MTMR7Q9Y216 660 aa16.01■□□□□ 0.15
LSM14A-203ENST00000544216 BAZ2BQ9UIF8 2168 aaKnown RBP16■□□□□ 0.15
LSM14A-203ENST00000544216 EVX2Q03828 476 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 PRIMPOLQ96LW4 560 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 VPS54Q9P1Q0 977 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 U2AF2P26368 475 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■■□□ 15.8
LSM14A-203ENST00000544216 NLRP12P59046 1061 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 PTPAQ15257 358 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 SF3B3Q15393 1217 aaKnown RBP16■□□□□ 0.15
LSM14A-203ENST00000544216 LONRF3Q496Y0 759 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 BARGINQ6ZT62 677 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 MRFAP1L1Q96HT8 127 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 V9GY48 417 aaPredicted RBP16■□□□□ 0.15
LSM14A-203ENST00000544216 DEXIO95424 95 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 MMP1P03956 469 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 IQCA1Q86XH1 822 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 LRRC8AQ8IWT6 810 aa16■□□□□ 0.15
LSM14A-203ENST00000544216 HIBADHP31937 336 aaKnown RBP15.99■□□□□ 0.15
LSM14A-203ENST00000544216 SARM1Q6SZW1 724 aa15.99■□□□□ 0.15
LSM14A-203ENST00000544216 TMC6Q7Z403 805 aa15.99■□□□□ 0.15
LSM14A-203ENST00000544216 KRI1Q8N9T8 703 aaKnown RBP15.99■□□□□ 0.15
LSM14A-203ENST00000544216 XPO4Q9C0E2 1151 aaKnown RBP15.99■□□□□ 0.15
LSM14A-203ENST00000544216 TNNT1P13805 278 aa15.99■□□□□ 0.15
LSM14A-203ENST00000544216 PRDX5P30044 214 aa15.99■□□□□ 0.15
LSM14A-203ENST00000544216 GRIN1Q05586 938 aa15.99■□□□□ 0.15
LSM14A-203ENST00000544216 CATIPQ7Z7H3 387 aa15.99■□□□□ 0.15
LSM14A-203ENST00000544216 MAP3K14Q99558 947 aa15.99■□□□□ 0.15
LSM14A-203ENST00000544216 PCDHB6Q9Y5E3 794 aa15.99■□□□□ 0.15
LSM14A-203ENST00000544216 PPP6R2O75170 966 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 TPTE2Q6XPS3 522 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 ENAHQ8N8S7 591 aaPredicted RBP15.98■□□□□ 0.15
LSM14A-203ENST00000544216 ZSCAN10Q96SZ4 725 aaPredicted RBP15.98■□□□□ 0.15
LSM14A-203ENST00000544216 RIOK1Q9BRS2 568 aaKnown RBP15.98■□□□□ 0.15
LSM14A-203ENST00000544216 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 CCNL1Q9UK58 526 aaPredicted RBP15.98■□□□□ 0.15
LSM14A-203ENST00000544216 RIOK3O14730 519 aaKnown RBP15.98■□□□□ 0.15
LSM14A-203ENST00000544216 FOXN1O15353 648 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 NMT2O60551 498 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 MECOMQ03112 1051 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 PTPN21Q16825 1174 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 COL16A1Q07092 1604 aaPredicted RBP15.98■□□□□ 0.15
LSM14A-203ENST00000544216 ANKRD36CQ5JPF3 1778 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 TOM1O60784 492 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 BCL2L12Q9HB09 334 aa15.98■□□□□ 0.15
LSM14A-203ENST00000544216 CUTAO60888 179 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 OLFM4Q6UX06 510 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 RTCBQ9Y3I0 505 aaKnown RBP15.97■□□□□ 0.15
LSM14A-203ENST00000544216 FAM205CA6NFA0 338 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 POLR2DO15514 142 aaKnown RBP15.97■□□□□ 0.15
LSM14A-203ENST00000544216 PLEKHA8P1O95397 391 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 SERPINC1P01008 464 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 ATP1A3P13637 1013 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 TOB1P50616 345 aaPredicted RBP15.97■□□□□ 0.15
LSM14A-203ENST00000544216 TXNRD3Q86VQ6 643 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 CYP2D6P10635 497 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 XBP1P17861 261 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 CDC25BP30305 580 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 RBM6P78332 1123 aaKnown RBP15.97■□□□□ 0.15
LSM14A-203ENST00000544216 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 PCDHA5Q9Y5H7 936 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 RTL9Q8NET4 1388 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 ZNF804BA4D1E1 1349 aa15.97■□□□□ 0.15
LSM14A-203ENST00000544216 RESP18Q5W5W9 173 aa15.96■□□□□ 0.15
LSM14A-203ENST00000544216 ZNF384Q8TF68 577 aa15.96■□□□□ 0.15
LSM14A-203ENST00000544216 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
LSM14A-203ENST00000544216 UBAP1LF5GYI3 381 aa15.96■□□□□ 0.15
LSM14A-203ENST00000544216 CTR9Q6PD62 1173 aa15.96■□□□□ 0.15
LSM14A-203ENST00000544216 DZIP1Q86YF9 867 aaKnown RBP15.96■□□□□ 0.15
LSM14A-203ENST00000544216 GRAMD1CQ8IYS0 662 aa15.96■□□□□ 0.15
LSM14A-203ENST00000544216 STK36Q9NRP7 1315 aa15.96■□□□□ 0.15
LSM14A-203ENST00000544216 RILPL1Q5EBL4 403 aa15.96■□□□□ 0.14
LSM14A-203ENST00000544216 CRNKL1Q9BZJ0 848 aaKnown RBP15.96■□□□□ 0.14
LSM14A-203ENST00000544216 PDCL3Q9H2J4 239 aa15.96■□□□□ 0.14
LSM14A-203ENST00000544216 NARFQ9UHQ1 456 aa15.96■□□□□ 0.14
LSM14A-203ENST00000544216 TAF1P21675 1872 aa15.96■□□□□ 0.14
LSM14A-203ENST00000544216 USP27XA6NNY8 438 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 KRBA2Q6ZNG9 492 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 NBPF11Q86T75 865 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 MCM9Q9NXL9 1143 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 RFC4P35249 363 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 ZNF827Q17R98 1081 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 CFAP100Q494V2 611 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 NSUN4Q96CB9 384 aaKnown RBP15.95■□□□□ 0.14
LSM14A-203ENST00000544216 GPR101Q96P66 508 aaPredicted RBP15.95■□□□□ 0.14
LSM14A-203ENST00000544216 TSPY2A6NKD2 308 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 SEC23AQ15436 765 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 USP49Q70CQ1 688 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 METTL16Q86W50 562 aaKnown RBP15.95■□□□□ 0.14
LSM14A-203ENST00000544216 SERTAD1Q9UHV2 236 aa15.95■□□□□ 0.14
LSM14A-203ENST00000544216 RPS6KA4O75676 772 aa15.94■□□□□ 0.14
LSM14A-203ENST00000544216 FANCCQ00597 558 aa15.94■□□□□ 0.14
LSM14A-203ENST00000544216 FBXO33Q7Z6M2 555 aa15.94■□□□□ 0.14
LSM14A-203ENST00000544216 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
LSM14A-203ENST00000544216 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms