RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 HS1BP3Q53T59 392 aa19.81■□□□□ 0.76
PTPRO-209ENST00000543886 IQCA1Q86XH1 822 aa19.81■□□□□ 0.76
PTPRO-209ENST00000543886 GGA1Q9UJY5 639 aa19.81■□□□□ 0.76
PTPRO-209ENST00000543886 CLIC4Q9Y696 253 aa19.81■□□□□ 0.76
PTPRO-209ENST00000543886 POLRMTO00411 1230 aaKnown RBP19.8■□□□□ 0.76
PTPRO-209ENST00000543886 BBOX1O75936 387 aa19.8■□□□□ 0.76
PTPRO-209ENST00000543886 FGRP09769 529 aa19.8■□□□□ 0.76
PTPRO-209ENST00000543886 FANCBQ8NB91 859 aa19.8■□□□□ 0.76
PTPRO-209ENST00000543886 LINC00301Q8NCQ3 95 aa19.8■□□□□ 0.76
PTPRO-209ENST00000543886 GPR101Q96P66 508 aaPredicted RBP19.8■□□□□ 0.76
PTPRO-209ENST00000543886 MYH2Q9UKX2 1941 aa19.8■□□□□ 0.76
PTPRO-209ENST00000543886 PRDM1O75626 825 aa19.8■□□□□ 0.76
PTPRO-209ENST00000543886 FSIP1Q8NA03 581 aa19.8■□□□□ 0.76
PTPRO-209ENST00000543886 GOLPH3LQ9H4A5 285 aa19.8■□□□□ 0.76
PTPRO-209ENST00000543886 PCDHA7Q9UN72 937 aa19.8■□□□□ 0.76
PTPRO-209ENST00000543886 FAM160A1Q05DH4 1040 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 IFIT1BQ5T764 474 aaKnown RBP19.79■□□□□ 0.76
PTPRO-209ENST00000543886 ANO1Q5XXA6 986 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 SASS6Q6UVJ0 657 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 PROM2Q8N271 834 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 ENAHQ8N8S7 591 aaPredicted RBP19.79■□□□□ 0.76
PTPRO-209ENST00000543886 SPTLC2O15270 562 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 CTAGE5O15320 804 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 KINO60870 393 aaKnown RBP19.79■□□□□ 0.76
PTPRO-209ENST00000543886 HOXA10P31260 410 aaPredicted RBP19.79■□□□□ 0.76
PTPRO-209ENST00000543886 CLCN1P35523 988 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 PPP2R5BQ15173 497 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 SBK1Q52WX2 424 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 ADALQ6DHV7 355 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 MRPS27Q92552 414 aaKnown RBP19.79■□□□□ 0.76
PTPRO-209ENST00000543886 NOL10Q9BSC4 688 aaKnown RBP19.79■□□□□ 0.76
PTPRO-209ENST00000543886 USP25Q9UHP3 1055 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 MRVI1Q9Y6F6 885 aa19.79■□□□□ 0.76
PTPRO-209ENST00000543886 DLEC1Q9Y238 1755 aa19.78■□□□□ 0.76
PTPRO-209ENST00000543886 A0A1W2PQ27 194 aa19.78■□□□□ 0.76
PTPRO-209ENST00000543886 A0A1W2PQ64 194 aa19.78■□□□□ 0.76
PTPRO-209ENST00000543886 A0A1W2PQD8 194 aa19.78■□□□□ 0.76
PTPRO-209ENST00000543886 ORC4O43929 436 aa19.78■□□□□ 0.76
PTPRO-209ENST00000543886 CATIPQ7Z7H3 387 aa19.78■□□□□ 0.76
PTPRO-209ENST00000543886 CRAMP1Q96RY5 1269 aa19.78■□□□□ 0.76
PTPRO-209ENST00000543886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTPRO-209ENST00000543886 DEXIO95424 95 aa19.77■□□□□ 0.76
PTPRO-209ENST00000543886 BAG3O95817 575 aa19.77■□□□□ 0.76
PTPRO-209ENST00000543886 RBM6P78332 1123 aaKnown RBP19.77■□□□□ 0.76
PTPRO-209ENST00000543886 PDE4BQ07343 736 aa19.77■□□□□ 0.76
PTPRO-209ENST00000543886 ZSCAN30Q86W11 494 aa19.77■□□□□ 0.76
PTPRO-209ENST00000543886 CRACR2BQ8N4Y2 399 aaPredicted RBP19.77■□□□□ 0.76
PTPRO-209ENST00000543886 FAM200AQ8TCP9 573 aa19.77■□□□□ 0.76
PTPRO-209ENST00000543886 CCDC39Q9UFE4 941 aa19.77■□□□□ 0.76
PTPRO-209ENST00000543886 USP5P45974 858 aa19.77■□□□□ 0.75
PTPRO-209ENST00000543886 SAFBQ15424 915 aaKnown RBP eCLIP19.77■□□□□ 0.75
PTPRO-209ENST00000543886 ZNF772Q68DY9 489 aaPredicted RBP19.77■□□□□ 0.75
PTPRO-209ENST00000543886 CD209Q9NNX6 404 aa19.77■□□□□ 0.75
PTPRO-209ENST00000543886 MCM9Q9NXL9 1143 aa19.77■□□□□ 0.75
PTPRO-209ENST00000543886 LDHCP07864 332 aa19.76■□□□□ 0.75
PTPRO-209ENST00000543886 CALM1P0DP23 149 aa19.76■□□□□ 0.75
PTPRO-209ENST00000543886 CALM2P0DP24 149 aa19.76■□□□□ 0.75
PTPRO-209ENST00000543886 CALM3P0DP25 149 aa19.76■□□□□ 0.75
PTPRO-209ENST00000543886 CYP2D6P10635 497 aa19.76■□□□□ 0.75
PTPRO-209ENST00000543886 U2AF2P26368 475 aaKnown RBP eCLIP19.76■□□□□ 0.75
PTPRO-209ENST00000543886 SNW1Q13573 536 aaKnown RBP19.76■□□□□ 0.75
PTPRO-209ENST00000543886 NBPF11Q86T75 865 aa19.76■□□□□ 0.75
PTPRO-209ENST00000543886 CCDC82Q8N4S0 544 aa19.76■□□□□ 0.75
PTPRO-209ENST00000543886 PODXL2Q9NZ53 605 aa19.76■□□□□ 0.75
PTPRO-209ENST00000543886 UBE2Q2LH0YL09 131 aa19.75■□□□□ 0.75
PTPRO-209ENST00000543886 TMC4Q7Z404 712 aa19.75■□□□□ 0.75
PTPRO-209ENST00000543886 ENGASEQ8NFI3 743 aa19.75■□□□□ 0.75
PTPRO-209ENST00000543886 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.75■□□□□ 0.75
PTPRO-209ENST00000543886 KLRG2A4D1S0 409 aaPredicted RBP19.75■□□□□ 0.75
PTPRO-209ENST00000543886 PTMAP06454 111 aaKnown RBP19.75■□□□□ 0.75
PTPRO-209ENST00000543886 IL1R1P14778 569 aa19.75■□□□□ 0.75
PTPRO-209ENST00000543886 GUCY1A2P33402 732 aa19.75■□□□□ 0.75
PTPRO-209ENST00000543886 AKAP17AQ02040 695 aaKnown RBP19.75■□□□□ 0.75
PTPRO-209ENST00000543886 DIXDC1Q155Q3 683 aa19.75■□□□□ 0.75
PTPRO-209ENST00000543886 ANO6Q4KMQ2 910 aa19.75■□□□□ 0.75
PTPRO-209ENST00000543886 AMOTL1Q8IY63 956 aa19.75■□□□□ 0.75
PTPRO-209ENST00000543886 CMTR1Q8N1G2 835 aaKnown RBP19.75■□□□□ 0.75
PTPRO-209ENST00000543886 SH3RF3Q8TEJ3 882 aaPredicted RBP19.75■□□□□ 0.75
PTPRO-209ENST00000543886 RBM28Q9NW13 759 aaKnown RBP19.75■□□□□ 0.75
PTPRO-209ENST00000543886 LRRC37AA6NMS7 1700 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 PPEF1O14829 653 aaPredicted RBP19.74■□□□□ 0.75
PTPRO-209ENST00000543886 DDAH1O94760 285 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 MMP1P03956 469 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 MSNP26038 577 aaKnown RBP19.74■□□□□ 0.75
PTPRO-209ENST00000543886 EVX2Q03828 476 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 ZNF827Q17R98 1081 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 RNF26Q9BY78 433 aaPredicted RBP19.74■□□□□ 0.75
PTPRO-209ENST00000543886 MROH7-TTC4A0A0A0MT08 1334 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 ADCY5O95622 1261 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 SLC39A14Q15043 492 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 CERS3Q8IU89 383 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 NLGN1Q8N2Q7 840 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 JMYQ8N9B5 988 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 TBC1D16Q8TBP0 767 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 UBE2Q2Q8WVN8 375 aa19.74■□□□□ 0.75
PTPRO-209ENST00000543886 NAV1Q8NEY1 1877 aa19.73■□□□□ 0.75
PTPRO-209ENST00000543886 MYH6P13533 1939 aa19.73■□□□□ 0.75
PTPRO-209ENST00000543886 C6orf229H3BNL8 230 aa19.73■□□□□ 0.75
PTPRO-209ENST00000543886 PLSCR1O15162 318 aa19.73■□□□□ 0.75
PTPRO-209ENST00000543886 APBA3O96018 575 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms