RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 KCNH4Q9UQ05 1017 aa23.17■■□□□ 1.3
SPPL3-208ENST00000543854 ATAD5Q96QE3 1844 aa23.17■■□□□ 1.3
SPPL3-208ENST00000543854 USP5P45974 858 aa23.16■■□□□ 1.3
SPPL3-208ENST00000543854 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.16■■□□□ 1.3
SPPL3-208ENST00000543854 ECHDC1Q9NTX5 307 aa23.16■■□□□ 1.3
SPPL3-208ENST00000543854 MYH7P12883 1935 aa23.16■■□□□ 1.3
SPPL3-208ENST00000543854 NAV1Q8NEY1 1877 aa23.15■■□□□ 1.3
SPPL3-208ENST00000543854 ZNF532Q9HCE3 1301 aa23.15■■□□□ 1.3
SPPL3-208ENST00000543854 HLA-DOAP06340 250 aa23.15■■□□□ 1.3
SPPL3-208ENST00000543854 PTPRAP18433 802 aa23.15■■□□□ 1.3
SPPL3-208ENST00000543854 TRIM34Q9BYJ4 488 aa23.15■■□□□ 1.3
SPPL3-208ENST00000543854 ZFYVE28Q9HCC9 887 aa23.15■■□□□ 1.3
SPPL3-208ENST00000543854 SAP30BPQ9UHR5 308 aaKnown RBP23.15■■□□□ 1.3
SPPL3-208ENST00000543854 PALD1Q9ULE6 856 aa23.15■■□□□ 1.3
SPPL3-208ENST00000543854 ZHX2Q9Y6X8 837 aa23.15■■□□□ 1.3
SPPL3-208ENST00000543854 MYH1P12882 1939 aa23.15■■□□□ 1.3
SPPL3-208ENST00000543854 DDX60LQ5H9U9 1706 aaKnown RBP23.14■■□□□ 1.3
SPPL3-208ENST00000543854 MAGEB6P1A0A0J9YX57 407 aa23.14■■□□□ 1.29
SPPL3-208ENST00000543854 BTBD19C9JJ37 291 aa23.14■■□□□ 1.29
SPPL3-208ENST00000543854 CRACR2BQ8N4Y2 399 aaPredicted RBP23.14■■□□□ 1.29
SPPL3-208ENST00000543854 RIOK1Q9BRS2 568 aaKnown RBP23.14■■□□□ 1.29
SPPL3-208ENST00000543854 PHIPQ8WWQ0 1821 aa23.14■■□□□ 1.29
SPPL3-208ENST00000543854 CXCL11O14625 94 aa23.13■■□□□ 1.29
SPPL3-208ENST00000543854 PTPRFP10586 1907 aa23.12■■□□□ 1.29
SPPL3-208ENST00000543854 TCRBV5S4A2TA0A5A2 114 aa23.12■■□□□ 1.29
SPPL3-208ENST00000543854 AAMPQ13685 434 aa23.12■■□□□ 1.29
SPPL3-208ENST00000543854 PKN2Q16513 984 aaKnown RBP23.12■■□□□ 1.29
SPPL3-208ENST00000543854 ANKRD23Q86SG2 305 aa23.12■■□□□ 1.29
SPPL3-208ENST00000543854 CRNKL1Q9BZJ0 848 aaKnown RBP23.12■■□□□ 1.29
SPPL3-208ENST00000543854 ADD2P35612 726 aa23.11■■□□□ 1.29
SPPL3-208ENST00000543854 CAP2P40123 477 aa23.11■■□□□ 1.29
SPPL3-208ENST00000543854 SLC4A8Q2Y0W8 1093 aa23.11■■□□□ 1.29
SPPL3-208ENST00000543854 FOXP4Q8IVH2 680 aaPredicted RBP23.11■■□□□ 1.29
SPPL3-208ENST00000543854 ERO1AQ96HE7 468 aa23.11■■□□□ 1.29
SPPL3-208ENST00000543854 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.11■■□□□ 1.29
SPPL3-208ENST00000543854 AFG3L2Q9Y4W6 797 aa23.11■■□□□ 1.29
SPPL3-208ENST00000543854 A0A0G2JLL6 359 aaPredicted RBP23.1■■□□□ 1.29
SPPL3-208ENST00000543854 PRRT2Q7Z6L0 340 aaPredicted RBP23.1■■□□□ 1.29
SPPL3-208ENST00000543854 METTL16Q86W50 562 aaKnown RBP23.1■■□□□ 1.29
SPPL3-208ENST00000543854 DNAJC18Q9H819 358 aa23.1■■□□□ 1.29
SPPL3-208ENST00000543854 ZBTB47Q9UFB7 747 aaPredicted RBP23.1■■□□□ 1.29
SPPL3-208ENST00000543854 TRIM75PA6NK02 468 aa23.09■■□□□ 1.29
SPPL3-208ENST00000543854 CCDC85CA6NKD9 419 aa23.09■■□□□ 1.29
SPPL3-208ENST00000543854 PDHXO00330 501 aa23.09■■□□□ 1.29
SPPL3-208ENST00000543854 SP3Q02447 781 aa23.09■■□□□ 1.29
SPPL3-208ENST00000543854 HDAC1Q13547 482 aaPredicted RBP23.09■■□□□ 1.29
SPPL3-208ENST00000543854 TSHZ3Q63HK5 1081 aa23.09■■□□□ 1.29
SPPL3-208ENST00000543854 ZSCAN25Q6NSZ9 544 aa23.09■■□□□ 1.29
SPPL3-208ENST00000543854 FASTKD5Q7L8L6 764 aaKnown RBP23.09■■□□□ 1.29
SPPL3-208ENST00000543854 TBC1D2Q9BYX2 928 aa23.09■■□□□ 1.29
SPPL3-208ENST00000543854 TLR2O60603 784 aa23.08■■□□□ 1.29
SPPL3-208ENST00000543854 MOGSQ13724 837 aa23.08■■□□□ 1.29
SPPL3-208ENST00000543854 CCDC84Q86UT8 332 aaPredicted RBP23.08■■□□□ 1.29
SPPL3-208ENST00000543854 LCORLQ8N3X6 602 aa23.08■■□□□ 1.29
SPPL3-208ENST00000543854 EHD4Q9H223 541 aa23.08■■□□□ 1.29
SPPL3-208ENST00000543854 TTC41PQ6P2S7 1318 aa23.08■■□□□ 1.28
SPPL3-208ENST00000543854 ASNSP08243 561 aa23.07■■□□□ 1.28
SPPL3-208ENST00000543854 RRP1BQ14684 758 aaKnown RBP23.07■■□□□ 1.28
SPPL3-208ENST00000543854 UBE3CQ15386 1083 aa23.07■■□□□ 1.28
SPPL3-208ENST00000543854 GADL1Q6ZQY3 521 aa23.07■■□□□ 1.28
SPPL3-208ENST00000543854 TTC6Q86TZ1 520 aa23.07■■□□□ 1.28
SPPL3-208ENST00000543854 CD99L2Q8TCZ2 262 aa23.07■■□□□ 1.28
SPPL3-208ENST00000543854 GCC1Q96CN9 775 aa23.07■■□□□ 1.28
SPPL3-208ENST00000543854 PARK7Q99497 189 aaKnown RBP23.07■■□□□ 1.28
SPPL3-208ENST00000543854 SERPINB13Q9UIV8 391 aa23.07■■□□□ 1.28
SPPL3-208ENST00000543854 TRIM17Q9Y577 477 aa23.07■■□□□ 1.28
SPPL3-208ENST00000543854 LOC285556D6RIA3 1793 aa23.06■■□□□ 1.28
SPPL3-208ENST00000543854 USP17L5A8MUK1 530 aa23.06■■□□□ 1.28
SPPL3-208ENST00000543854 ERC2O15083 957 aa23.06■■□□□ 1.28
SPPL3-208ENST00000543854 MBD4O95243 580 aa23.06■■□□□ 1.28
SPPL3-208ENST00000543854 ZNF280CQ8ND82 737 aa23.06■■□□□ 1.28
SPPL3-208ENST00000543854 ARMT1Q9H993 441 aa23.06■■□□□ 1.28
SPPL3-208ENST00000543854 AS3MTQ9HBK9 375 aa23.06■■□□□ 1.28
SPPL3-208ENST00000543854 POLR3DP05423 398 aaPredicted RBP23.05■■□□□ 1.28
SPPL3-208ENST00000543854 SLFNL1Q499Z3 407 aa23.05■■□□□ 1.28
SPPL3-208ENST00000543854 GPAT2Q6NUI2 795 aa23.05■■□□□ 1.28
SPPL3-208ENST00000543854 FBXO46Q6PJ61 603 aaPredicted RBP23.05■■□□□ 1.28
SPPL3-208ENST00000543854 OTOP1Q7RTM1 612 aa23.05■■□□□ 1.28
SPPL3-208ENST00000543854 KBTBD3Q8NAB2 608 aa23.05■■□□□ 1.28
SPPL3-208ENST00000543854 SDR42E1Q8WUS8 393 aa23.05■■□□□ 1.28
SPPL3-208ENST00000543854 GINM1Q9NU53 330 aa23.05■■□□□ 1.28
SPPL3-208ENST00000543854 HTTP42858 3142 aa23.04■■□□□ 1.28
SPPL3-208ENST00000543854 GDF11O95390 407 aa23.04■■□□□ 1.28
SPPL3-208ENST00000543854 SPP2Q13103 211 aa23.04■■□□□ 1.28
SPPL3-208ENST00000543854 MCM9Q9NXL9 1143 aa23.04■■□□□ 1.28
SPPL3-208ENST00000543854 ZBTB21Q9ULJ3 1066 aa23.04■■□□□ 1.28
SPPL3-208ENST00000543854 HPS5Q9UPZ3 1129 aa23.04■■□□□ 1.28
SPPL3-208ENST00000543854 GLRX3O76003 335 aaKnown RBP23.03■■□□□ 1.28
SPPL3-208ENST00000543854 MX1P20591 662 aa23.03■■□□□ 1.28
SPPL3-208ENST00000543854 ARHGEF6Q15052 776 aa23.03■■□□□ 1.28
SPPL3-208ENST00000543854 ANKRD45Q5TZF3 282 aa23.03■■□□□ 1.28
SPPL3-208ENST00000543854 OTUD7AQ8TE49 926 aaPredicted RBP23.03■■□□□ 1.28
SPPL3-208ENST00000543854 EFCC1Q9HA90 598 aa23.03■■□□□ 1.28
SPPL3-208ENST00000543854 DCP1AQ9NPI6 582 aaPredicted RBP23.03■■□□□ 1.28
SPPL3-208ENST00000543854 AGTPBP1Q9UPW5 1226 aa23.03■■□□□ 1.28
SPPL3-208ENST00000543854 SLC45A1Q9Y2W3 748 aa23.03■■□□□ 1.28
SPPL3-208ENST00000543854 CHGBP05060 677 aa23.02■■□□□ 1.28
SPPL3-208ENST00000543854 PI4K2BQ8TCG2 481 aa23.02■■□□□ 1.28
SPPL3-208ENST00000543854 DDRGK1Q96HY6 314 aa23.02■■□□□ 1.28
SPPL3-208ENST00000543854 CPA4Q9UI42 421 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms