RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PRRT2Q7Z6L0 340 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-215ENST00000543359 CLASRPQ8N2M8 674 aaKnown RBP16■□□□□ 0.15
TNFRSF1A-215ENST00000543359 TGFBRAP1Q8WUH2 860 aa16■□□□□ 0.15
TNFRSF1A-215ENST00000543359 IDH1O75874 414 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-215ENST00000543359 CCDC84Q86UT8 332 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-215ENST00000543359 MAPKAPK5Q8IW41 473 aa15.99■□□□□ 0.15
TNFRSF1A-215ENST00000543359 MAGEB6Q8N7X4 407 aa15.99■□□□□ 0.15
TNFRSF1A-215ENST00000543359 NOL10Q9BSC4 688 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-215ENST00000543359 EFCC1Q9HA90 598 aa15.99■□□□□ 0.15
TNFRSF1A-215ENST00000543359 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.99■□□□□ 0.15
TNFRSF1A-215ENST00000543359 PICK1Q9NRD5 415 aa15.99■□□□□ 0.15
TNFRSF1A-215ENST00000543359 PTPN22Q9Y2R2 807 aa15.99■□□□□ 0.15
TNFRSF1A-215ENST00000543359 PDHXO00330 501 aa15.98■□□□□ 0.15
TNFRSF1A-215ENST00000543359 SOX10P56693 466 aa15.98■□□□□ 0.15
TNFRSF1A-215ENST00000543359 JAG1P78504 1218 aa15.98■□□□□ 0.15
TNFRSF1A-215ENST00000543359 TMED8Q6PL24 325 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-215ENST00000543359 MIGA1Q8NAN2 632 aa15.98■□□□□ 0.15
TNFRSF1A-215ENST00000543359 DHX36Q9H2U1 1008 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-215ENST00000543359 DNAJC18Q9H819 358 aa15.98■□□□□ 0.15
TNFRSF1A-215ENST00000543359 PI4KBQ9UBF8 816 aa15.98■□□□□ 0.15
TNFRSF1A-215ENST00000543359 HERC5Q9UII4 1024 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-215ENST00000543359 ZSWIM8A7E2V4 1837 aa15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 KIAA0100Q14667 2235 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 IFIT2P09913 472 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 CTGFP29279 349 aa15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 CAP2P40123 477 aa15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 MAP3K12Q12852 859 aa15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 RIOK1Q9BRS2 568 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 ARHGAP39Q9C0H5 1083 aa15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 PALD1Q9ULE6 856 aa15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 PDE4DIPQ5VU43 2346 aa15.97■□□□□ 0.15
TNFRSF1A-215ENST00000543359 ATAD5Q96QE3 1844 aa15.96■□□□□ 0.15
TNFRSF1A-215ENST00000543359 LACTBP83111 547 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-215ENST00000543359 MLLT1Q03111 559 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-215ENST00000543359 FASTKD5Q7L8L6 764 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-215ENST00000543359 FOXP4Q8IVH2 680 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-215ENST00000543359 EDC3Q96F86 508 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-215ENST00000543359 DCTPP1Q9H773 170 aa15.96■□□□□ 0.15
TNFRSF1A-215ENST00000543359 TCRBV5S4A2TA0A5A2 114 aa15.95■□□□□ 0.14
TNFRSF1A-215ENST00000543359 BCRP11274 1271 aa15.95■□□□□ 0.14
TNFRSF1A-215ENST00000543359 PDE6AP16499 860 aa15.95■□□□□ 0.14
TNFRSF1A-215ENST00000543359 ATP5JP18859 108 aa15.95■□□□□ 0.14
TNFRSF1A-215ENST00000543359 SHROOM1Q2M3G4 852 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-215ENST00000543359 CERS3Q8IU89 383 aa15.95■□□□□ 0.14
TNFRSF1A-215ENST00000543359 CPA4Q9UI42 421 aa15.95■□□□□ 0.14
TNFRSF1A-215ENST00000543359 SLC45A1Q9Y2W3 748 aa15.95■□□□□ 0.14
TNFRSF1A-215ENST00000543359 MYH1P12882 1939 aa15.95■□□□□ 0.14
TNFRSF1A-215ENST00000543359 TRIM75PA6NK02 468 aa15.94■□□□□ 0.14
TNFRSF1A-215ENST00000543359 GOLIM4O00461 696 aa15.94■□□□□ 0.14
TNFRSF1A-215ENST00000543359 SMARCA5O60264 1052 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-215ENST00000543359 CYP2C8P10632 490 aa15.94■□□□□ 0.14
TNFRSF1A-215ENST00000543359 TTF1Q15361 905 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-215ENST00000543359 SLC9C2Q5TAH2 1124 aa15.94■□□□□ 0.14
TNFRSF1A-215ENST00000543359 ARMC5Q96C12 935 aa15.94■□□□□ 0.14
TNFRSF1A-215ENST00000543359 SAP30BPQ9UHR5 308 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-215ENST00000543359 PCDHB15Q9Y5E8 787 aa15.94■□□□□ 0.14
TNFRSF1A-215ENST00000543359 SPP2Q13103 211 aa15.93■□□□□ 0.14
TNFRSF1A-215ENST00000543359 TREML2Q5T2D2 321 aa15.93■□□□□ 0.14
TNFRSF1A-215ENST00000543359 ZNF280CQ8ND82 737 aa15.93■□□□□ 0.14
TNFRSF1A-215ENST00000543359 PARK7Q99497 189 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-215ENST00000543359 HAUS7Q99871 368 aa15.93■□□□□ 0.14
TNFRSF1A-215ENST00000543359 WDR18Q9BV38 432 aa15.93■□□□□ 0.14
TNFRSF1A-215ENST00000543359 LRRCC1Q9C099 1032 aa15.93■□□□□ 0.14
TNFRSF1A-215ENST00000543359 BOLA2Q9H3K6 86 aa15.93■□□□□ 0.14
TNFRSF1A-215ENST00000543359 ZNF532Q9HCE3 1301 aa15.93■□□□□ 0.14
TNFRSF1A-215ENST00000543359 DDX60LQ5H9U9 1706 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 USP17L5A8MUK1 530 aa15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 SLFNL1Q499Z3 407 aa15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 SH3D19Q5HYK7 790 aa15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 GADL1Q6ZQY3 521 aa15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 TRIM47Q96LD4 638 aa15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 DNAJC2Q99543 621 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 TBC1D2Q9BYX2 928 aa15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 PAG1Q9NWQ8 432 aa15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 PTCH2Q9Y6C5 1203 aa15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 LOC285556D6RIA3 1793 aa15.92■□□□□ 0.14
TNFRSF1A-215ENST00000543359 MAGEB6P1A0A0J9YX57 407 aa15.91■□□□□ 0.14
TNFRSF1A-215ENST00000543359 CHGBP05060 677 aa15.91■□□□□ 0.14
TNFRSF1A-215ENST00000543359 ARHGEF6Q15052 776 aa15.91■□□□□ 0.14
TNFRSF1A-215ENST00000543359 TATDN1Q6P1N9 297 aa15.91■□□□□ 0.14
TNFRSF1A-215ENST00000543359 PROCA1Q8NCQ7 364 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-215ENST00000543359 BCL11AQ9H165 835 aa15.91■□□□□ 0.14
TNFRSF1A-215ENST00000543359 EHD4Q9H223 541 aa15.91■□□□□ 0.14
TNFRSF1A-215ENST00000543359 GINM1Q9NU53 330 aa15.91■□□□□ 0.14
TNFRSF1A-215ENST00000543359 AGTPBP1Q9UPW5 1226 aa15.91■□□□□ 0.14
TNFRSF1A-215ENST00000543359 GNRH1P01148 92 aa15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 ASNSP08243 561 aa15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 ADD2P35612 726 aa15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 PSMC4P43686 418 aa15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 USP5P45974 858 aa15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 PLCD1P51178 756 aa15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 HMGCS2P54868 508 aa15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 EVX2Q03828 476 aa15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 SLC4A8Q2Y0W8 1093 aa15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 CRACR2BQ8N4Y2 399 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-215ENST00000543359 GDF11O95390 407 aa15.89■□□□□ 0.13
TNFRSF1A-215ENST00000543359 HLA-DOAP06340 250 aa15.89■□□□□ 0.13
TNFRSF1A-215ENST00000543359 BACE1P56817 501 aa15.89■□□□□ 0.13
TNFRSF1A-215ENST00000543359 GABPAQ06546 454 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms