RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 NFXL1Q6ZNB6 911 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 ARMCX6Q7L4S7 300 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 HDXQ7Z353 690 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 SUGCTQ9HAC7 445 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
CDH4-201ENST00000543233 PHRF1Q9P1Y6 1649 aaKnown RBP12.83□□□□□ -0.35
CDH4-201ENST00000543233 SNAP23O00161 211 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 RWDD2BP57060 319 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 SCARF1Q14162 830 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 KCNB2Q92953 911 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 ZKSCAN4Q969J2 545 aaPredicted RBP12.83□□□□□ -0.36
CDH4-201ENST00000543233 IL17RAQ96F46 866 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 MRFAP1L1Q96HT8 127 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 ALS2Q96Q42 1657 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 CRYMQ14894 314 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 TMC6Q7Z403 805 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 RPUSD2Q8IZ73 545 aaKnown RBP12.83□□□□□ -0.36
CDH4-201ENST00000543233 ACSBG1Q96GR2 724 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 KIF1AQ12756 1690 aa12.83□□□□□ -0.36
CDH4-201ENST00000543233 CHUKO15111 745 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 RPSAP08865 295 aaKnown RBP12.82□□□□□ -0.36
CDH4-201ENST00000543233 CDC25BP30305 580 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 TTC6Q86TZ1 520 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 TATDN2Q93075 761 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 KIAA0754O94854 1291 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 GBP2P32456 591 aaPredicted RBP12.82□□□□□ -0.36
CDH4-201ENST00000543233 GSDMDP57764 484 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 TCIRG1Q13488 830 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 AFAP1L1Q8TED9 768 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 GOLGA1Q92805 767 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 BAG1Q99933 345 aaPredicted RBP12.82□□□□□ -0.36
CDH4-201ENST00000543233 CPDO75976 1380 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 A0A087WWV3 80 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 IFIT5Q13325 482 aaKnown RBP12.82□□□□□ -0.36
CDH4-201ENST00000543233 METTL24Q5JXM2 366 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 LDHAL6AQ6ZMR3 332 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 TRIM74Q86UV6 250 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 TRIM73Q86UV7 250 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 STK11IPQ8N1F8 1099 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 CNNM1Q9NRU3 951 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 ZBTB1Q9Y2K1 713 aa12.82□□□□□ -0.36
CDH4-201ENST00000543233 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
CDH4-201ENST00000543233 KRT85P78386 507 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 TRAF1Q13077 416 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 ANKRD1Q15327 319 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 SMARCC1Q92922 1105 aaPredicted RBP12.81□□□□□ -0.36
CDH4-201ENST00000543233 TRMT112Q9UI30 125 aaKnown RBP12.81□□□□□ -0.36
CDH4-201ENST00000543233 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
CDH4-201ENST00000543233 SCN11AQ9UI33 1791 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 M0R2C6 588 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 ERLIN1O75477 346 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 STARD3NLO95772 234 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 SSBP05455 408 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDH4-201ENST00000543233 ZAP70P43403 619 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 MICAL1Q8TDZ2 1067 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 FTOQ9C0B1 505 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDH4-201ENST00000543233 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
CDH4-201ENST00000543233 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
CDH4-201ENST00000543233 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
CDH4-201ENST00000543233 SNUPNO95149 360 aaKnown RBP12.8□□□□□ -0.36
CDH4-201ENST00000543233 ECEL1O95672 775 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 SPDL1Q96EA4 605 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 GREM2Q9H772 168 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 CCDC151A5D8V7 595 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 NUTM2BA6NNL0 878 aaPredicted RBP12.8□□□□□ -0.36
CDH4-201ENST00000543233 NUTM2EB1AL46 878 aaPredicted RBP12.8□□□□□ -0.36
CDH4-201ENST00000543233 HSPD1P10809 573 aaKnown RBP12.8□□□□□ -0.36
CDH4-201ENST00000543233 GNG11P61952 73 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 E2F5Q15329 346 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
CDH4-201ENST00000543233 CCDC97Q96F63 343 aaPredicted RBP12.8□□□□□ -0.36
CDH4-201ENST00000543233 SPATA32Q96LK8 384 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 PICK1Q9NRD5 415 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 SAMM50Q9Y512 469 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 MAST3O60307 1309 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 PHLPP2Q6ZVD8 1323 aa12.8□□□□□ -0.36
CDH4-201ENST00000543233 IDH1O75874 414 aaKnown RBP12.79□□□□□ -0.36
CDH4-201ENST00000543233 SF3A1Q15459 793 aaKnown RBP12.79□□□□□ -0.36
CDH4-201ENST00000543233 CEP85LQ5SZL2 805 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 SUDS3Q9H7L9 328 aaPredicted RBP12.79□□□□□ -0.36
CDH4-201ENST00000543233 SHTN1A0MZ66 631 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 ITGA6P23229 1130 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 KRT32Q14532 448 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 OTUD7BQ6GQQ9 843 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 FAM71BQ8TC56 605 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 SCLT1Q96NL6 688 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 PUF60Q9UHX1 559 aaKnown RBP12.79□□□□□ -0.36
CDH4-201ENST00000543233 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
CDH4-201ENST00000543233 DCCP43146 1447 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 RNF113AO15541 343 aaKnown RBP12.79□□□□□ -0.36
CDH4-201ENST00000543233 CDR1P51861 262 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 C11orf57Q6ZUT1 292 aaPredicted RBP12.79□□□□□ -0.36
CDH4-201ENST00000543233 KLHL23Q8NBE8 558 aa12.79□□□□□ -0.36
CDH4-201ENST00000543233 PSDA5PKW4 1024 aaPredicted RBP12.78□□□□□ -0.36
CDH4-201ENST00000543233 RNF40O75150 1001 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 PDCP20941 246 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms