RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 CUTAO60888 179 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 SEPT2Q15019 361 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 CREB3L3Q68CJ9 461 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 PTPDC1A2A3K4 754 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 HAUS1Q96CS2 278 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 RPS6KA1Q15418 735 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 HAUS7Q99871 368 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 PEX26Q7Z412 305 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 SSH2Q76I76 1423 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 VAT1LQ9HCJ6 419 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 RILPQ96NA2 401 aa21.46■■□□□ 1.03
HDAC4-215ENST00000543185 ESRRGP62508 458 aa21.45■■□□□ 1.03
HDAC4-215ENST00000543185 TRIM68Q6AZZ1 485 aa21.45■■□□□ 1.03
HDAC4-215ENST00000543185 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 ANKLE2Q86XL3 938 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 LARP6Q9BRS8 491 aaKnown RBP21.45■■□□□ 1.02
HDAC4-215ENST00000543185 ORC6Q9Y5N6 252 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 CUL4BQ13620 913 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 RAPGEF6Q8TEU7 1601 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 TRAF5O00463 557 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 CCDC124Q96CT7 223 aaKnown RBP21.45■■□□□ 1.02
HDAC4-215ENST00000543185 TACO1Q9BSH4 297 aaKnown RBP21.45■■□□□ 1.02
HDAC4-215ENST00000543185 CCDC184Q52MB2 194 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 HOXA7P31268 230 aaPredicted RBP21.45■■□□□ 1.02
HDAC4-215ENST00000543185 CENPKQ9BS16 269 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 KDM2BQ8NHM5 1336 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 KCNG1Q9UIX4 513 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 WWC3Q9ULE0 1092 aa21.45■■□□□ 1.02
HDAC4-215ENST00000543185 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.45■■□□□ 1.02
HDAC4-215ENST00000543185 SMIM24O75264 130 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 KIF11P52732 1056 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 FANCCQ00597 558 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 MUM1L1Q5H9M0 696 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 TPX2Q9ULW0 747 aaKnown RBP21.44■■□□□ 1.02
HDAC4-215ENST00000543185 DEXIO95424 95 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 SNRPA1P09661 255 aaKnown RBP21.44■■□□□ 1.02
HDAC4-215ENST00000543185 HSPA8P11142 646 aaKnown RBP21.44■■□□□ 1.02
HDAC4-215ENST00000543185 SLC4A4Q9Y6R1 1079 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 PIK3C2GO75747 1445 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 ZNF804AQ7Z570 1209 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 MAN1A1P33908 653 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 CCDC169A6NNP5 214 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 KRT5P13647 590 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 CCDC105Q8IYK2 499 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 LZTS2Q9BRK4 669 aa21.44■■□□□ 1.02
HDAC4-215ENST00000543185 DDX21Q9NR30 783 aaKnown RBP eCLIP21.44■■□□□ 1.02
HDAC4-215ENST00000543185 TBC1D8O95759 1140 aa21.43■■□□□ 1.02
HDAC4-215ENST00000543185 THUMPD2Q9BTF0 503 aaKnown RBP21.43■■□□□ 1.02
HDAC4-215ENST00000543185 SUN1O94901 812 aa21.43■■□□□ 1.02
HDAC4-215ENST00000543185 XAB2Q9HCS7 855 aaKnown RBP21.43■■□□□ 1.02
HDAC4-215ENST00000543185 MYO1AQ9UBC5 1043 aa21.43■■□□□ 1.02
HDAC4-215ENST00000543185 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
HDAC4-215ENST00000543185 EIF3CLB5ME19 914 aaKnown RBP21.43■■□□□ 1.02
HDAC4-215ENST00000543185 INPP1P49441 399 aa21.43■■□□□ 1.02
HDAC4-215ENST00000543185 EIF3CQ99613 913 aaKnown RBP21.43■■□□□ 1.02
HDAC4-215ENST00000543185 PARD3Q8TEW0 1356 aa21.43■■□□□ 1.02
HDAC4-215ENST00000543185 TNFAIP3P21580 790 aa21.43■■□□□ 1.02
HDAC4-215ENST00000543185 ZC4H2Q9NQZ6 224 aa21.43■■□□□ 1.02
HDAC4-215ENST00000543185 HELLSQ9NRZ9 838 aa21.43■■□□□ 1.02
HDAC4-215ENST00000543185 GOLGA4Q13439 2230 aaKnown RBP21.43■■□□□ 1.02
HDAC4-215ENST00000543185 SPZ1Q9BXG8 430 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 PI4KAP2A4QPH2 592 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 RASA3Q14644 834 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 AFAP1Q8N556 730 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 PI4KAP1Q8N8J0 262 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 NLRP12P59046 1061 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 ATP2B3Q16720 1220 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 TXLNGQ9NUQ3 528 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 ANKRD20A4Q4UJ75 823 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 ANKRD20A8PQ5CZ79 823 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 ANKRD20A2Q5SQ80 823 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 ANKRD20A1Q5TYW2 823 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 SFMBT2Q5VUG0 894 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 CSGALNACT2Q8N6G5 542 aa21.42■■□□□ 1.02
HDAC4-215ENST00000543185 CNOT10Q9H9A5 744 aaKnown RBP21.42■■□□□ 1.02
HDAC4-215ENST00000543185 ST5P78524 1137 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 ANO1Q5XXA6 986 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 BBOF1Q8ND07 529 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 RABGGTAQ92696 567 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 CCDC68Q9H2F9 335 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 DCTPP1Q9H773 170 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 FNBP1Q96RU3 617 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 PPP1R1BQ9UD71 204 aaPredicted RBP21.41■■□□□ 1.02
HDAC4-215ENST00000543185 RNF113AO15541 343 aaKnown RBP21.41■■□□□ 1.02
HDAC4-215ENST00000543185 KRT12Q99456 494 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 EFCC1Q9HA90 598 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 VWA3AA6NCI4 1184 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
HDAC4-215ENST00000543185 STK38LQ9Y2H1 464 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 SLC12A2P55011 1212 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 TMEM87BQ96K49 555 aa21.41■■□□□ 1.02
HDAC4-215ENST00000543185 RNF8O76064 485 aa21.4■■□□□ 1.02
HDAC4-215ENST00000543185 ANKRD13DQ6ZTN6 518 aa21.4■■□□□ 1.02
HDAC4-215ENST00000543185 POSTNQ15063 836 aa21.4■■□□□ 1.02
HDAC4-215ENST00000543185 ZKSCAN8Q15776 578 aaPredicted RBP21.4■■□□□ 1.02
HDAC4-215ENST00000543185 ATP8B2P98198 1209 aa21.4■■□□□ 1.02
HDAC4-215ENST00000543185 CCDC93Q567U6 631 aa21.4■■□□□ 1.02
HDAC4-215ENST00000543185 NAA16Q6N069 864 aaPredicted RBP21.4■■□□□ 1.02
HDAC4-215ENST00000543185 USP26Q9BXU7 913 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms