RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 TIMMDC1Q9NPL8 285 aa13.23□□□□□ -0.29
RFC5-209ENST00000543153 FER1L6Q2WGJ9 1857 aa13.23□□□□□ -0.29
RFC5-209ENST00000543153 CCDC88AQ3V6T2 1871 aa13.23□□□□□ -0.29
RFC5-209ENST00000543153 SLX4Q8IY92 1834 aa13.23□□□□□ -0.29
RFC5-209ENST00000543153 ABL1P00519 1130 aa13.22□□□□□ -0.29
RFC5-209ENST00000543153 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
RFC5-209ENST00000543153 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
RFC5-209ENST00000543153 RHOQP17081 205 aa13.22□□□□□ -0.29
RFC5-209ENST00000543153 NAA30Q147X3 362 aaPredicted RBP13.22□□□□□ -0.29
RFC5-209ENST00000543153 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
RFC5-209ENST00000543153 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
RFC5-209ENST00000543153 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
RFC5-209ENST00000543153 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
RFC5-209ENST00000543153 SEPT3Q9UH03 358 aa13.22□□□□□ -0.29
RFC5-209ENST00000543153 DNMT3LQ9UJW3 386 aa13.22□□□□□ -0.29
RFC5-209ENST00000543153 LAMB4A4D0S4 1761 aa13.22□□□□□ -0.29
RFC5-209ENST00000543153 MAP3K15Q6ZN16 1313 aa13.21□□□□□ -0.29
RFC5-209ENST00000543153 ZNF541Q9H0D2 1346 aa13.21□□□□□ -0.29
RFC5-209ENST00000543153 C16orf46Q6P387 395 aa13.21□□□□□ -0.29
RFC5-209ENST00000543153 LDHDQ86WU2 507 aa13.21□□□□□ -0.29
RFC5-209ENST00000543153 ALDH16A1Q8IZ83 802 aa13.21□□□□□ -0.29
RFC5-209ENST00000543153 GTF3C2Q8WUA4 911 aaPredicted RBP13.21□□□□□ -0.29
RFC5-209ENST00000543153 TMX4Q9H1E5 349 aaPredicted RBP13.21□□□□□ -0.29
RFC5-209ENST00000543153 ZDHHC3Q9NYG2 299 aa13.21□□□□□ -0.29
RFC5-209ENST00000543153 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.29
RFC5-209ENST00000543153 HACL1Q9UJ83 578 aa13.21□□□□□ -0.29
RFC5-209ENST00000543153 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.29
RFC5-209ENST00000543153 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
RFC5-209ENST00000543153 A0A1B0GTH6 734 aa13.2□□□□□ -0.3
RFC5-209ENST00000543153 KLRG2A4D1S0 409 aaPredicted RBP13.2□□□□□ -0.3
RFC5-209ENST00000543153 ERVV-1B6SEH8 477 aa13.2□□□□□ -0.3
RFC5-209ENST00000543153 IARSP41252 1262 aaKnown RBP13.2□□□□□ -0.3
RFC5-209ENST00000543153 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
RFC5-209ENST00000543153 CAPN12Q6ZSI9 719 aa13.2□□□□□ -0.3
RFC5-209ENST00000543153 TTLL7Q6ZT98 887 aa13.2□□□□□ -0.3
RFC5-209ENST00000543153 C7orf43Q8WVR3 580 aa13.2□□□□□ -0.3
RFC5-209ENST00000543153 PHACTR1Q9C0D0 580 aa13.2□□□□□ -0.3
RFC5-209ENST00000543153 GZF1Q9H116 711 aaPredicted RBP13.2□□□□□ -0.3
RFC5-209ENST00000543153 TAF1DQ9H5J8 278 aaPredicted RBP13.2□□□□□ -0.3
RFC5-209ENST00000543153 RNF123Q5XPI4 1314 aa13.19□□□□□ -0.3
RFC5-209ENST00000543153 TCERG1O14776 1098 aaKnown RBP13.19□□□□□ -0.3
RFC5-209ENST00000543153 SERPINB4P48594 390 aa13.19□□□□□ -0.3
RFC5-209ENST00000543153 SH3PXD2AQ5TCZ1 1133 aa13.19□□□□□ -0.3
RFC5-209ENST00000543153 SYNE4Q8N205 404 aa13.19□□□□□ -0.3
RFC5-209ENST00000543153 EGFL7Q9UHF1 273 aa13.19□□□□□ -0.3
RFC5-209ENST00000543153 GJA3Q9Y6H8 435 aa13.19□□□□□ -0.3
RFC5-209ENST00000543153 DICER1Q9UPY3 1922 aaKnown RBP13.18□□□□□ -0.3
RFC5-209ENST00000543153 EIF2S2P20042 333 aaKnown RBP13.18□□□□□ -0.3
RFC5-209ENST00000543153 EPHX2P34913 555 aa13.18□□□□□ -0.3
RFC5-209ENST00000543153 EIF6P56537 245 aaKnown RBP13.18□□□□□ -0.3
RFC5-209ENST00000543153 RTN1Q16799 776 aa13.18□□□□□ -0.3
RFC5-209ENST00000543153 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
RFC5-209ENST00000543153 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
RFC5-209ENST00000543153 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
RFC5-209ENST00000543153 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
RFC5-209ENST00000543153 PPP1R42Q7Z4L9 355 aa13.17□□□□□ -0.3
RFC5-209ENST00000543153 PNMA8AQ86V59 439 aaPredicted RBP13.17□□□□□ -0.3
RFC5-209ENST00000543153 MYO19Q96H55 970 aa13.17□□□□□ -0.3
RFC5-209ENST00000543153 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 TXLNAP40222 546 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 RIPK4P57078 832 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 LMOD3Q0VAK6 560 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 HIF1AQ16665 826 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 CRY2Q49AN0 593 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 SUSD4Q5VX71 490 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 GPC2Q8N158 579 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 HELQQ8TDG4 1101 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 PSMD1Q99460 953 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
RFC5-209ENST00000543153 DYRK1BQ9Y463 629 aa13.16□□□□□ -0.3
RFC5-209ENST00000543153 GPC6Q9Y625 555 aaPredicted RBP13.16□□□□□ -0.3
RFC5-209ENST00000543153 IBTKQ9P2D0 1353 aaPredicted RBP13.16□□□□□ -0.3
RFC5-209ENST00000543153 PARP10Q53GL7 1025 aa13.15□□□□□ -0.3
RFC5-209ENST00000543153 RHPN1Q8TCX5 695 aa13.15□□□□□ -0.3
RFC5-209ENST00000543153 NEUROD4Q9HD90 331 aa13.15□□□□□ -0.3
RFC5-209ENST00000543153 CNTNAP1P78357 1384 aa13.15□□□□□ -0.3
RFC5-209ENST00000543153 FZD9O00144 591 aa13.14□□□□□ -0.31
RFC5-209ENST00000543153 NTSR2O95665 410 aa13.14□□□□□ -0.31
RFC5-209ENST00000543153 MSX1P28360 303 aa13.14□□□□□ -0.31
RFC5-209ENST00000543153 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
RFC5-209ENST00000543153 ARSJQ5FYB0 599 aaPredicted RBP13.14□□□□□ -0.31
RFC5-209ENST00000543153 COX20Q5RI15 118 aa13.14□□□□□ -0.31
RFC5-209ENST00000543153 MAP1SQ66K74 1059 aaPredicted RBP13.14□□□□□ -0.31
RFC5-209ENST00000543153 NIM1KQ8IY84 436 aa13.14□□□□□ -0.31
RFC5-209ENST00000543153 UTP14AQ9BVJ6 771 aaKnown RBP13.14□□□□□ -0.31
RFC5-209ENST00000543153 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
RFC5-209ENST00000543153 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
RFC5-209ENST00000543153 DNMT3AQ9Y6K1 912 aaPredicted RBP13.14□□□□□ -0.31
RFC5-209ENST00000543153 PASKQ96RG2 1323 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 RIC1Q4ADV7 1423 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 SCN4AP35499 1836 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 DLG5Q8TDM6 1919 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 SOBPA7XYQ1 873 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 PPIP5K2O43314 1243 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 F11P03951 625 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 ANXA1P04083 346 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 ZNF211Q13398 564 aaPredicted RBP13.13□□□□□ -0.31
RFC5-209ENST00000543153 C11orf91Q3C1V1 193 aa13.13□□□□□ -0.31
RFC5-209ENST00000543153 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms