RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 CSRNP1Q96S65 589 aa12.75□□□□□ -0.37
NPIPB3-210ENST00000542817 EHD4Q9H223 541 aa12.75□□□□□ -0.37
NPIPB3-210ENST00000542817 ANO2Q9NQ90 1003 aa12.75□□□□□ -0.37
NPIPB3-210ENST00000542817 ANAPC4Q9UJX5 808 aa12.75□□□□□ -0.37
NPIPB3-210ENST00000542817 FAM196BA6NMK8 535 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 TBC1D12O60347 775 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 SHMT1P34896 483 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 TNNI2P48788 182 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 PPARAQ07869 468 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 SHROOM1Q2M3G4 852 aaPredicted RBP12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 CASC1Q6TDU7 716 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 STOX1Q6ZVD7 989 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 MIGA2Q7L4E1 593 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 RASEFQ8IZ41 740 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 NAPBQ9H115 298 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 DHX36Q9H2U1 1008 aaKnown RBP12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 ARPP21Q9UBL0 812 aaPredicted RBP12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 ZNF112Q9UJU3 913 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 PAPPA2Q9BXP8 1791 aa12.74□□□□□ -0.37
NPIPB3-210ENST00000542817 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
NPIPB3-210ENST00000542817 TDO2P48775 406 aa12.73□□□□□ -0.37
NPIPB3-210ENST00000542817 HAND2P61296 217 aa12.73□□□□□ -0.37
NPIPB3-210ENST00000542817 CTDSPL2Q05D32 466 aa12.73□□□□□ -0.37
NPIPB3-210ENST00000542817 TATDN1Q6P1N9 297 aa12.73□□□□□ -0.37
NPIPB3-210ENST00000542817 C16orf86Q6ZW13 317 aa12.73□□□□□ -0.37
NPIPB3-210ENST00000542817 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
NPIPB3-210ENST00000542817 NACAP1Q9BZK3 213 aa12.73□□□□□ -0.37
NPIPB3-210ENST00000542817 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
NPIPB3-210ENST00000542817 MINDY4BA8MYZ0 360 aa12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 SLC27A2O14975 620 aa12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 EPB41L2O43491 1005 aaKnown RBP12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 POLR3DP05423 398 aaPredicted RBP12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 HSPA4P34932 840 aa12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 TTC6Q86TZ1 520 aa12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 FOXP4Q8IVH2 680 aaPredicted RBP12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 SMC1BQ8NDV3 1235 aa12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 LAMB1P07942 1786 aa12.72□□□□□ -0.37
NPIPB3-210ENST00000542817 REC8O95072 547 aa12.71□□□□□ -0.37
NPIPB3-210ENST00000542817 CDK8P49336 464 aa12.71□□□□□ -0.37
NPIPB3-210ENST00000542817 MAP3K11Q16584 847 aa12.71□□□□□ -0.37
NPIPB3-210ENST00000542817 TSGA10IPQ3SY00 556 aa12.71□□□□□ -0.37
NPIPB3-210ENST00000542817 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
NPIPB3-210ENST00000542817 ZSCAN29Q8IWY8 852 aaPredicted RBP12.71□□□□□ -0.37
NPIPB3-210ENST00000542817 KLRG1Q96E93 195 aa12.71□□□□□ -0.37
NPIPB3-210ENST00000542817 IL17RAQ96F46 866 aa12.71□□□□□ -0.37
NPIPB3-210ENST00000542817 HERC5Q9UII4 1024 aaKnown RBP12.71□□□□□ -0.37
NPIPB3-210ENST00000542817 NEDD4P46934 1319 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 RASA1P20936 1047 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 INPP5BP32019 993 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 FSTL1Q12841 308 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 SUPT20HL1Q3ZLR7 823 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 LDLRAD1Q5T700 205 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 STK11IPQ8N1F8 1099 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 STAG1Q8WVM7 1258 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 RBM19Q9Y4C8 960 aaKnown RBP12.7□□□□□ -0.38
NPIPB3-210ENST00000542817 ZNF213O14771 459 aa12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 ORC4O43929 436 aa12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 PRDM1O75626 825 aa12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 CELF2O95319 508 aaKnown RBP12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 HLA-DOAP06340 250 aa12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 ADCK5Q3MIX3 580 aa12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 AKNAD1Q5T1N1 836 aa12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 KIF2CQ99661 725 aa12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 SNX14Q9Y5W7 946 aa12.69□□□□□ -0.38
NPIPB3-210ENST00000542817 E7EWF7 191 aa12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 AKR1B1P15121 316 aa12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 PRKG1Q13976 671 aa12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 IMMTQ16891 758 aaKnown RBP12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 ZKSCAN4Q969J2 545 aaPredicted RBP12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 ZNF341Q9BYN7 854 aa12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 OTOFQ9HC10 1997 aa12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 GREB1LQ9C091 1923 aaPredicted RBP12.68□□□□□ -0.38
NPIPB3-210ENST00000542817 TRPM7Q96QT4 1865 aa12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 IGKV6D-41A0A0C4DH26 115 aa12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 UBE2Q2LH0YL09 131 aa12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 CAP2P40123 477 aa12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 NOVP48745 357 aa12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 MB21D2Q8IYB1 491 aaPredicted RBP12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 CLMNQ96JQ2 1002 aa12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 IL17RBQ9NRM6 502 aa12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 SNCAIPQ9Y6H5 919 aa12.67□□□□□ -0.38
NPIPB3-210ENST00000542817 GDF11O95390 407 aa12.66□□□□□ -0.38
NPIPB3-210ENST00000542817 RBM25P49756 843 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms