RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 HSPD1P10809 573 aaKnown RBP14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 RPS12P25398 132 aaKnown RBP14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 ALX1Q15699 326 aa14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 GIMAP6Q6P9H5 292 aa14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 KCNB2Q92953 911 aa14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 NACAP1Q9BZK3 213 aa14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 GGA3Q9NZ52 723 aa14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 SERPINA10Q9UK55 444 aa14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 TTF2Q9UNY4 1162 aaKnown RBP14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 PRUNE2Q8WUY3 3088 aa14.67□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 ASTN2O75129 1339 aaPredicted RBP14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 FOCADQ5VW36 1801 aa14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 PTH1RQ03431 593 aa14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 SREBF2Q12772 1141 aa14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 SLFNL1Q499Z3 407 aa14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 CCDC129Q6ZRS4 1044 aa14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 MOB2Q70IA6 237 aa14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 ADGRA1Q86SQ6 560 aa14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 TEKT1Q969V4 418 aa14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 RBM8AQ9Y5S9 174 aaKnown RBP14.66□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 PATL2C9JE40 543 aaKnown RBP14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 PSMD14O00487 310 aa14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 ZKSCAN1P17029 563 aaPredicted RBP14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 NECTIN1Q15223 517 aa14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 GRIK5Q16478 980 aa14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 LCORLQ8N3X6 602 aa14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 ZDHHC15Q96MV8 337 aa14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 GMLQ99445 158 aa14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 CRNKL1Q9BZJ0 848 aaKnown RBP14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 CDK5RAP2Q96SN8 1893 aa14.65□□□□□ -0.06
CACNA1C-IT3-201ENST00000542680 ECM29Q5VYK3 1845 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 KRT32Q14532 448 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 DIXDC1Q155Q3 683 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 TSGA10IPQ3SY00 556 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 RBM26Q5T8P6 1007 aaKnown RBP14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 MIGA1Q8NAN2 632 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 DDRGK1Q96HY6 314 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 ARMT1Q9H993 441 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 KCNQ5Q9NR82 932 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 ATP8A2Q9NTI2 1148 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 DAGLAQ9Y4D2 1042 aa14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 LAMA2P24043 3122 aaKnown RBP14.64□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 NAV1Q8NEY1 1877 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 UBE2Q2LH0YL09 131 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 FOXP2O15409 715 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 BTDP43251 543 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 MKRN3Q13064 507 aaKnown RBP14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 KIF4BQ2VIQ3 1234 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 VPS53Q5VIR6 699 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 GPR153Q6NV75 609 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 KIAA0825Q8IV33 1275 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 OGFOD1Q8N543 542 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 DEFB123Q8N688 67 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 MTMR14Q8NCE2 650 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 ERO1AQ96HE7 468 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 AATFQ9NY61 560 aaKnown RBP eCLIP14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 RBM19Q9Y4C8 960 aaKnown RBP14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 SLC4A4Q9Y6R1 1079 aa14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 DDX60LQ5H9U9 1706 aaKnown RBP14.63□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 GSG1L2A8MUP6 293 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 ALDH1A1P00352 501 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 COL9A1P20849 921 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 CRKP46108 304 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 NT5C2P49902 561 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 CAP1Q01518 475 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 RABEP1Q15276 862 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 IMMTQ16891 758 aaKnown RBP14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 CREB3L3Q68CJ9 461 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 IFNL3Q8IZI9 196 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 CD99L2Q8TCZ2 262 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 DPF3Q92784 378 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 TM6SF1Q9BZW5 370 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 NAPBQ9H115 298 aa14.62□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 SLC27A2O14975 620 aa14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 NPM3O75607 178 aaKnown RBP14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 FGAP02671 866 aa14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 USP17L8P0C7I0 530 aa14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 ANP32AP39687 249 aaKnown RBP14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 SLC4A8Q2Y0W8 1093 aa14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 MXD3Q9BW11 206 aa14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 EFCC1Q9HA90 598 aa14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 EPB41L4AQ9HCS5 686 aaPredicted RBP14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 ARPP21Q9UBL0 812 aaPredicted RBP14.61□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 F8W031 263 aaPredicted RBP14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 APPP05067 770 aa14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 PCP11498 1178 aaKnown RBP14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 PSMA5P28066 241 aa14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 TDO2P48775 406 aa14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 RHBDL3P58872 404 aa14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 ZNF280AP59817 542 aaPredicted RBP14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 DYNLL1P63167 89 aaKnown RBP14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 KIF2CQ99661 725 aa14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 SNX14Q9Y5W7 946 aa14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 COL2A1P02458 1487 aaPredicted RBP14.6□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 BAZ2AQ9UIF9 1905 aaKnown RBP14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 ZNF213O14771 459 aa14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 CYP21A2P08686 494 aa14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 HMGB1P09429 215 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms