RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 SCYL3Q8IZE3 742 aa13.98□□□□□ -0.17
C2CD3-217ENST00000542452 TNS4Q8IZW8 715 aa13.98□□□□□ -0.17
C2CD3-217ENST00000542452 CFHR5Q9BXR6 569 aa13.98□□□□□ -0.17
C2CD3-217ENST00000542452 SAP30BPQ9UHR5 308 aaKnown RBP13.98□□□□□ -0.17
C2CD3-217ENST00000542452 PALD1Q9ULE6 856 aa13.98□□□□□ -0.17
C2CD3-217ENST00000542452 IGHDP01880 384 aa13.97□□□□□ -0.17
C2CD3-217ENST00000542452 JAG1P78504 1218 aa13.97□□□□□ -0.17
C2CD3-217ENST00000542452 PPATQ06203 517 aa13.97□□□□□ -0.17
C2CD3-217ENST00000542452 MOGSQ13724 837 aa13.97□□□□□ -0.17
C2CD3-217ENST00000542452 TMED8Q6PL24 325 aaPredicted RBP13.97□□□□□ -0.17
C2CD3-217ENST00000542452 FAM43AQ8N2R8 423 aa13.97□□□□□ -0.17
C2CD3-217ENST00000542452 KCNH4Q9UQ05 1017 aa13.97□□□□□ -0.17
C2CD3-217ENST00000542452 MYH8P13535 1937 aa13.97□□□□□ -0.17
C2CD3-217ENST00000542452 TTC41PQ6P2S7 1318 aa13.96□□□□□ -0.17
C2CD3-217ENST00000542452 MAGEB6P1A0A0J9YX57 407 aa13.96□□□□□ -0.17
C2CD3-217ENST00000542452 PTPRAP18433 802 aa13.96□□□□□ -0.17
C2CD3-217ENST00000542452 GTF2A2P52657 109 aa13.96□□□□□ -0.17
C2CD3-217ENST00000542452 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
C2CD3-217ENST00000542452 SMC5Q8IY18 1101 aa13.96□□□□□ -0.17
C2CD3-217ENST00000542452 ARMT1Q9H993 441 aa13.96□□□□□ -0.17
C2CD3-217ENST00000542452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.96□□□□□ -0.17
C2CD3-217ENST00000542452 BTBD19C9JJ37 291 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 GPR25O00155 361 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 PRKAB2O43741 272 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 MBD4O95243 580 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 MX1P20591 662 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 USP5P45974 858 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 INHBEP58166 350 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 CAP1Q01518 475 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 CRHR2Q13324 411 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 AAMPQ13685 434 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 ANKRD45Q5TZF3 282 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 SDR42E1Q8WUS8 393 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 ZNF296Q8WUU4 475 aaPredicted RBP13.95□□□□□ -0.18
C2CD3-217ENST00000542452 GCC1Q96CN9 775 aa13.95□□□□□ -0.18
C2CD3-217ENST00000542452 DHX36Q9H2U1 1008 aaKnown RBP13.95□□□□□ -0.18
C2CD3-217ENST00000542452 CTNND1O60716 968 aaKnown RBP13.94□□□□□ -0.18
C2CD3-217ENST00000542452 SNAPC2Q13487 334 aa13.94□□□□□ -0.18
C2CD3-217ENST00000542452 UBE3CQ15386 1083 aa13.94□□□□□ -0.18
C2CD3-217ENST00000542452 CERS3Q8IU89 383 aa13.94□□□□□ -0.18
C2CD3-217ENST00000542452 KBTBD3Q8NAB2 608 aa13.94□□□□□ -0.18
C2CD3-217ENST00000542452 GPATCH3Q96I76 525 aa13.94□□□□□ -0.18
C2CD3-217ENST00000542452 PUS7LQ9H0K6 701 aaKnown RBP13.94□□□□□ -0.18
C2CD3-217ENST00000542452 PI4KBQ9UBF8 816 aa13.94□□□□□ -0.18
C2CD3-217ENST00000542452 HERC5Q9UII4 1024 aaKnown RBP13.94□□□□□ -0.18
C2CD3-217ENST00000542452 SMIM22K7EJ46 135 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 GDF11O95390 407 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 ALDH1A1P00352 501 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 CYP2D6P10635 497 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 CETPP11597 493 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 CAP2P40123 477 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 PLCD1P51178 756 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 NOM1Q5C9Z4 860 aaKnown RBP13.93□□□□□ -0.18
C2CD3-217ENST00000542452 IFFO2Q5TF58 517 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.93□□□□□ -0.18
C2CD3-217ENST00000542452 MCOLN1Q9GZU1 580 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
C2CD3-217ENST00000542452 AFG3L2Q9Y4W6 797 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 ZHX2Q9Y6X8 837 aa13.93□□□□□ -0.18
C2CD3-217ENST00000542452 ADGRA2Q96PE1 1338 aa13.92□□□□□ -0.18
C2CD3-217ENST00000542452 A0A0G2JLL6 359 aaPredicted RBP13.92□□□□□ -0.18
C2CD3-217ENST00000542452 HLA-DOAP06340 250 aa13.92□□□□□ -0.18
C2CD3-217ENST00000542452 DGKZQ13574 1117 aa13.92□□□□□ -0.18
C2CD3-217ENST00000542452 TAF1CQ15572 869 aaPredicted RBP13.92□□□□□ -0.18
C2CD3-217ENST00000542452 GPAT2Q6NUI2 795 aa13.92□□□□□ -0.18
C2CD3-217ENST00000542452 PRRT2Q7Z6L0 340 aaPredicted RBP13.92□□□□□ -0.18
C2CD3-217ENST00000542452 OSBP2Q969R2 916 aa13.92□□□□□ -0.18
C2CD3-217ENST00000542452 CRNKL1Q9BZJ0 848 aaKnown RBP13.92□□□□□ -0.18
C2CD3-217ENST00000542452 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
C2CD3-217ENST00000542452 PICK1Q9NRD5 415 aa13.92□□□□□ -0.18
C2CD3-217ENST00000542452 M0R2C6 588 aa13.91□□□□□ -0.18
C2CD3-217ENST00000542452 CXCL11O14625 94 aa13.91□□□□□ -0.18
C2CD3-217ENST00000542452 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
C2CD3-217ENST00000542452 SHMT1P34896 483 aa13.91□□□□□ -0.18
C2CD3-217ENST00000542452 PDE1AP54750 535 aa13.91□□□□□ -0.18
C2CD3-217ENST00000542452 GABPAQ06546 454 aa13.91□□□□□ -0.18
C2CD3-217ENST00000542452 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
C2CD3-217ENST00000542452 EHD4Q9H223 541 aa13.91□□□□□ -0.18
C2CD3-217ENST00000542452 RWDD1Q9H446 243 aaPredicted RBP13.91□□□□□ -0.18
C2CD3-217ENST00000542452 STAP2Q9UGK3 403 aa13.91□□□□□ -0.18
C2CD3-217ENST00000542452 GREB1LQ9C091 1923 aaPredicted RBP13.91□□□□□ -0.18
C2CD3-217ENST00000542452 CYP2D7A0A087X1C5 515 aa13.9□□□□□ -0.18
C2CD3-217ENST00000542452 TRIM75PA6NK02 468 aa13.9□□□□□ -0.18
C2CD3-217ENST00000542452 ERC2O15083 957 aa13.9□□□□□ -0.18
C2CD3-217ENST00000542452 RNF113AO15541 343 aaKnown RBP13.9□□□□□ -0.18
C2CD3-217ENST00000542452 FKTNO75072 461 aa13.9□□□□□ -0.18
C2CD3-217ENST00000542452 ZSCAN25Q6NSZ9 544 aa13.9□□□□□ -0.18
C2CD3-217ENST00000542452 ANKRD23Q86SG2 305 aa13.9□□□□□ -0.18
C2CD3-217ENST00000542452 FOXP4Q8IVH2 680 aaPredicted RBP13.9□□□□□ -0.18
C2CD3-217ENST00000542452 CRACR2BQ8N4Y2 399 aaPredicted RBP13.9□□□□□ -0.18
C2CD3-217ENST00000542452 APPBP2Q92624 585 aa13.9□□□□□ -0.18
C2CD3-217ENST00000542452 MCM9Q9NXL9 1143 aa13.9□□□□□ -0.18
C2CD3-217ENST00000542452 ZBTB21Q9ULJ3 1066 aa13.9□□□□□ -0.18
C2CD3-217ENST00000542452 MGAMO43451 1857 aa13.89□□□□□ -0.19
C2CD3-217ENST00000542452 PDHXO00330 501 aa13.89□□□□□ -0.19
C2CD3-217ENST00000542452 NUCB1Q02818 461 aa13.89□□□□□ -0.19
C2CD3-217ENST00000542452 OTUD7BQ6GQQ9 843 aa13.89□□□□□ -0.19
C2CD3-217ENST00000542452 TATDN1Q6P1N9 297 aa13.89□□□□□ -0.19
C2CD3-217ENST00000542452 CTU1Q7Z7A3 348 aaKnown RBP13.89□□□□□ -0.19
C2CD3-217ENST00000542452 SLC44A5Q8NCS7 719 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms