RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 CYP21A2P08686 494 aa18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 FGRP09769 529 aa18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 PCP11498 1178 aaKnown RBP18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 NT5C2P49902 561 aa18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 RNF20Q5VTR2 975 aa18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 RBM46Q8TBY0 533 aaKnown RBP18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 SWAP70Q9UH65 585 aa18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 SERPINB13Q9UIV8 391 aa18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 SLC27A2O14975 620 aa18.47■□□□□ 0.55
LRTOMT-219ENST00000541899 ITGBL1O95965 494 aaPredicted RBP18.47■□□□□ 0.55
LRTOMT-219ENST00000541899 CYP2D6P10635 497 aa18.47■□□□□ 0.55
LRTOMT-219ENST00000541899 NBPF12Q5TAG4 269 aaPredicted RBP18.47■□□□□ 0.55
LRTOMT-219ENST00000541899 CREB3L3Q68CJ9 461 aa18.47■□□□□ 0.55
LRTOMT-219ENST00000541899 C16orf86Q6ZW13 317 aa18.47■□□□□ 0.55
LRTOMT-219ENST00000541899 CDCA5Q96FF9 252 aa18.47■□□□□ 0.55
LRTOMT-219ENST00000541899 GLIS2Q9BZE0 524 aaPredicted RBP18.47■□□□□ 0.55
LRTOMT-219ENST00000541899 CYP2D7A0A087X1C5 515 aa18.46■□□□□ 0.55
LRTOMT-219ENST00000541899 MCCP23508 829 aa18.46■□□□□ 0.55
LRTOMT-219ENST00000541899 DCAF15Q66K64 600 aa18.46■□□□□ 0.55
LRTOMT-219ENST00000541899 CDAN1Q8IWY9 1227 aa18.46■□□□□ 0.55
LRTOMT-219ENST00000541899 SMC1BQ8NDV3 1235 aa18.46■□□□□ 0.55
LRTOMT-219ENST00000541899 STAG1Q8WVM7 1258 aa18.46■□□□□ 0.55
LRTOMT-219ENST00000541899 NBPF3Q9H094 633 aa18.46■□□□□ 0.55
LRTOMT-219ENST00000541899 ZNF287Q9HBT7 754 aa18.46■□□□□ 0.55
LRTOMT-219ENST00000541899 NF2P35240 595 aa18.45■□□□□ 0.54
LRTOMT-219ENST00000541899 PDE4BQ07343 736 aa18.45■□□□□ 0.54
LRTOMT-219ENST00000541899 AKNAD1Q5T1N1 836 aa18.45■□□□□ 0.54
LRTOMT-219ENST00000541899 TATDN1Q6P1N9 297 aa18.45■□□□□ 0.54
LRTOMT-219ENST00000541899 IL17RAQ96F46 866 aa18.45■□□□□ 0.54
LRTOMT-219ENST00000541899 RNF41Q9H4P4 317 aaPredicted RBP18.45■□□□□ 0.54
LRTOMT-219ENST00000541899 UPF2Q9HAU5 1272 aaKnown RBP18.45■□□□□ 0.54
LRTOMT-219ENST00000541899 TRPM7Q96QT4 1865 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 SSC5DA1L4H1 1573 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 SMIM22K7EJ46 135 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 ORC4O43929 436 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 CDK8P49336 464 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 ANAPC15P60006 121 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 HAND2P61296 217 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 EVX2Q03828 476 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 CTDSPL2Q05D32 466 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 FSTL1Q12841 308 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 PRAMEF18Q5VWM3 479 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 CRACR2BQ8N4Y2 399 aaPredicted RBP18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 DNAJC18Q9H819 358 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 MYH8P13535 1937 aa18.44■□□□□ 0.54
LRTOMT-219ENST00000541899 RBM25P49756 843 aaKnown RBP18.43■□□□□ 0.54
LRTOMT-219ENST00000541899 KRT32Q14532 448 aa18.43■□□□□ 0.54
LRTOMT-219ENST00000541899 SLC4A8Q2Y0W8 1093 aa18.43■□□□□ 0.54
LRTOMT-219ENST00000541899 MFSD6Q6ZSS7 791 aa18.43■□□□□ 0.54
LRTOMT-219ENST00000541899 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
LRTOMT-219ENST00000541899 TRIM34Q9BYJ4 488 aa18.43■□□□□ 0.54
LRTOMT-219ENST00000541899 ZNF341Q9BYN7 854 aa18.43■□□□□ 0.54
LRTOMT-219ENST00000541899 CNNM2Q9H8M5 875 aa18.43■□□□□ 0.54
LRTOMT-219ENST00000541899 ZNF112Q9UJU3 913 aa18.43■□□□□ 0.54
LRTOMT-219ENST00000541899 UNCXA6NJT0 531 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 PHF20L1A8MW92 1017 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 E7EWF7 191 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 PPP1R12BO60237 982 aaPredicted RBP18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 SHMT1P34896 483 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 MAP3K11Q16584 847 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 DLK2Q6UY11 383 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 TBC1D10CQ8IV04 446 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 RASEFQ8IZ41 740 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 SNX14Q9Y5W7 946 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 TACC3Q9Y6A5 838 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 PASKQ96RG2 1323 aa18.42■□□□□ 0.54
LRTOMT-219ENST00000541899 TRAF5O00463 557 aa18.41■□□□□ 0.54
LRTOMT-219ENST00000541899 USP2O75604 605 aaPredicted RBP18.41■□□□□ 0.54
LRTOMT-219ENST00000541899 FKBP1BP68106 108 aa18.41■□□□□ 0.54
LRTOMT-219ENST00000541899 MIGA2Q7L4E1 593 aa18.41■□□□□ 0.54
LRTOMT-219ENST00000541899 CCDC17Q96LX7 622 aa18.41■□□□□ 0.54
LRTOMT-219ENST00000541899 C22orf23Q9BZE7 217 aa18.41■□□□□ 0.54
LRTOMT-219ENST00000541899 KRT23Q9C075 422 aa18.41■□□□□ 0.54
LRTOMT-219ENST00000541899 MKNK2Q9HBH9 465 aa18.41■□□□□ 0.54
LRTOMT-219ENST00000541899 GINM1Q9NU53 330 aa18.41■□□□□ 0.54
LRTOMT-219ENST00000541899 TRDNQ13061 729 aa18.4■□□□□ 0.54
LRTOMT-219ENST00000541899 ZNF444Q8N0Y2 327 aaPredicted RBP18.4■□□□□ 0.54
LRTOMT-219ENST00000541899 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
LRTOMT-219ENST00000541899 KLRG1Q96E93 195 aa18.4■□□□□ 0.54
LRTOMT-219ENST00000541899 TAF6LQ9Y6J9 622 aa18.4■□□□□ 0.54
LRTOMT-219ENST00000541899 PAPPA2Q9BXP8 1791 aa18.4■□□□□ 0.54
LRTOMT-219ENST00000541899 CTNND1O60716 968 aaKnown RBP18.39■□□□□ 0.53
LRTOMT-219ENST00000541899 RASA1P20936 1047 aa18.39■□□□□ 0.53
LRTOMT-219ENST00000541899 CERKLQ49MI3 558 aaPredicted RBP18.39■□□□□ 0.53
LRTOMT-219ENST00000541899 STOX1Q6ZVD7 989 aa18.39■□□□□ 0.53
LRTOMT-219ENST00000541899 NCOA7Q8NI08 942 aa18.39■□□□□ 0.53
LRTOMT-219ENST00000541899 TBC1D32Q96NH3 1257 aa18.39■□□□□ 0.53
LRTOMT-219ENST00000541899 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
LRTOMT-219ENST00000541899 FAM196BA6NMK8 535 aa18.38■□□□□ 0.53
LRTOMT-219ENST00000541899 HMGB1P09429 215 aaKnown RBP18.38■□□□□ 0.53
LRTOMT-219ENST00000541899 SLURP2P0DP57 97 aa18.38■□□□□ 0.53
LRTOMT-219ENST00000541899 CAP2P40123 477 aa18.38■□□□□ 0.53
LRTOMT-219ENST00000541899 IREB2P48200 963 aaKnown RBP18.38■□□□□ 0.53
LRTOMT-219ENST00000541899 ARMC9Q7Z3E5 817 aa18.38■□□□□ 0.53
LRTOMT-219ENST00000541899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.38■□□□□ 0.53
LRTOMT-219ENST00000541899 ESR2Q92731 530 aa18.38■□□□□ 0.53
LRTOMT-219ENST00000541899 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms