RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 PDE6AP16499 860 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 PDCP20941 246 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 GJB2P29033 226 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 NF2P35240 595 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 BCAMP50895 628 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 RASGRF1Q13972 1273 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 SLFNL1Q499Z3 407 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 CAVIN4Q5BKX8 364 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 STRIP1Q5VSL9 837 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 MCTP1Q6DN14 999 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 TTLL5Q6EMB2 1281 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 Q6ZUG5 572 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 CCDC83Q8IWF9 413 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 GMLQ99445 158 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 MCOLN1Q9GZU1 580 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 PIH1D3Q9NQM4 214 aaKnown RBP7.73□□□□□ -1.17
VEGFB-203ENST00000541681 LMBRD1Q9NUN5 540 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 TPCN1Q9ULQ1 816 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 ISY1Q9ULR0 285 aaKnown RBP7.73□□□□□ -1.17
VEGFB-203ENST00000541681 ATP6V1DQ9Y5K8 247 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 TAF6LQ9Y6J9 622 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 PDS5AQ29RF7 1337 aaKnown RBP7.73□□□□□ -1.17
VEGFB-203ENST00000541681 WDR19Q8NEZ3 1342 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 PITPNM2Q9BZ72 1349 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 ZNF532Q9HCE3 1301 aa7.73□□□□□ -1.17
VEGFB-203ENST00000541681 PATL2C9JE40 543 aaKnown RBP7.72□□□□□ -1.17
VEGFB-203ENST00000541681 ZNF213O14771 459 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 FOXP2O15409 715 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 ZSCAN22P10073 491 aaPredicted RBP7.72□□□□□ -1.17
VEGFB-203ENST00000541681 GNAT2P19087 354 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 SYT1P21579 422 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 EVCP57679 992 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 KLHL40Q2TBA0 621 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 STOX1Q6ZVD7 989 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 ZNF804AQ7Z570 1209 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 FBXO33Q7Z6M2 555 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 APOBEC3FQ8IUX4 373 aaKnown RBP7.72□□□□□ -1.17
VEGFB-203ENST00000541681 NCOA7Q8NI08 942 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 ZNF274Q96GC6 653 aaPredicted RBP7.72□□□□□ -1.17
VEGFB-203ENST00000541681 STRBPQ96SI9 672 aaKnown RBP7.72□□□□□ -1.17
VEGFB-203ENST00000541681 LLPHQ9BRT6 129 aaKnown RBP7.72□□□□□ -1.17
VEGFB-203ENST00000541681 VEZTQ9HBM0 779 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 DENND2AQ9ULE3 1009 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 NAV1Q8NEY1 1877 aa7.72□□□□□ -1.17
VEGFB-203ENST00000541681 CLRN2A0PK11 232 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 WNT10BO00744 389 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 PFKFB2O60825 505 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 MCM5P33992 734 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 RBM5P52756 815 aaKnown RBP eCLIP7.71□□□□□ -1.18
VEGFB-203ENST00000541681 ST3GAL1Q11201 340 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 COL9A3Q14050 684 aaPredicted RBP7.71□□□□□ -1.18
VEGFB-203ENST00000541681 DLGAP5Q15398 846 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 L1TD1Q5T7N2 865 aaKnown RBP7.71□□□□□ -1.18
VEGFB-203ENST00000541681 GTF3C6Q969F1 213 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 FAM84BQ96KN1 310 aaPredicted RBP7.71□□□□□ -1.18
VEGFB-203ENST00000541681 LARP6Q9BRS8 491 aaKnown RBP7.71□□□□□ -1.18
VEGFB-203ENST00000541681 CD209Q9NNX6 404 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 RNF186Q9NXI6 227 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 SAGE1Q9NXZ1 904 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 FZD1Q9UP38 647 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 PCDHAC2Q9Y5I4 1007 aa7.71□□□□□ -1.18
VEGFB-203ENST00000541681 DDX49Q9Y6V7 483 aaKnown RBP7.71□□□□□ -1.18
VEGFB-203ENST00000541681 PRPF40AO75400 957 aaKnown RBP7.7□□□□□ -1.18
VEGFB-203ENST00000541681 F13A1P00488 732 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 FKBP1BP68106 108 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 FGD1P98174 961 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 TRDNQ13061 729 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 LARP1BQ659C4 914 aaKnown RBP7.7□□□□□ -1.18
VEGFB-203ENST00000541681 C15orf52Q6ZUT6 534 aaKnown RBP7.7□□□□□ -1.18
VEGFB-203ENST00000541681 ARMC9Q7Z3E5 817 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 VPS37DQ86XT2 251 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 MB21D2Q8IYB1 491 aaPredicted RBP7.7□□□□□ -1.18
VEGFB-203ENST00000541681 IFNL3Q8IZI9 196 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 CERS5Q8N5B7 392 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 MAGEB6Q8N7X4 407 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 NECAB1Q8N987 351 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 TMEM87AQ8NBN3 555 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 SMARCC2Q8TAQ2 1214 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 BRF1Q92994 677 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 TCEANC2Q96MN5 208 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 LRP2BPQ9P2M1 347 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 ANGEL1Q9UNK9 670 aaKnown RBP7.7□□□□□ -1.18
VEGFB-203ENST00000541681 MTMR6Q9Y217 621 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 KIF3AQ9Y496 699 aa7.7□□□□□ -1.18
VEGFB-203ENST00000541681 COL1A1P02452 1464 aaPredicted RBP7.69□□□□□ -1.18
VEGFB-203ENST00000541681 FSD2A1L4K1 749 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 GSG1L2A8MUP6 293 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 MYO1BO43795 1136 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 MBD3O95983 291 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 APPP05067 770 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 HIBADHP31937 336 aaKnown RBP7.69□□□□□ -1.18
VEGFB-203ENST00000541681 GYG1P46976 350 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 SOX10P56693 466 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 HMGN5P82970 282 aaKnown RBP7.69□□□□□ -1.18
VEGFB-203ENST00000541681 CHAF1AQ13111 956 aaPredicted RBP7.69□□□□□ -1.18
VEGFB-203ENST00000541681 CSPP1Q1MSJ5 1256 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 CFAP100Q494V2 611 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 RALYLQ86SE5 291 aaKnown RBP7.69□□□□□ -1.18
VEGFB-203ENST00000541681 RGS22Q8NE09 1264 aa7.69□□□□□ -1.18
VEGFB-203ENST00000541681 CSRNP1Q96S65 589 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms