RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 DNAJC18Q9H819 358 aa14.48□□□□□ -0.09
CLSTN3-211ENST00000541667 SLC45A1Q9Y2W3 748 aa14.48□□□□□ -0.09
CLSTN3-211ENST00000541667 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
CLSTN3-211ENST00000541667 PTPRFP10586 1907 aa14.48□□□□□ -0.09
CLSTN3-211ENST00000541667 TRIM75PA6NK02 468 aa14.47□□□□□ -0.09
CLSTN3-211ENST00000541667 ECM2O94769 699 aaPredicted RBP14.47□□□□□ -0.09
CLSTN3-211ENST00000541667 OSBPP22059 807 aa14.47□□□□□ -0.09
CLSTN3-211ENST00000541667 DYNLL1P63167 89 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-211ENST00000541667 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
CLSTN3-211ENST00000541667 TGFBRAP1Q8WUH2 860 aa14.47□□□□□ -0.09
CLSTN3-211ENST00000541667 PI4KBQ9UBF8 816 aa14.47□□□□□ -0.09
CLSTN3-211ENST00000541667 SRRDQ9UH36 339 aa14.47□□□□□ -0.09
CLSTN3-211ENST00000541667 SIPA1L1O43166 1804 aa14.47□□□□□ -0.09
CLSTN3-211ENST00000541667 BAG3O95817 575 aa14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 PRMT2P55345 433 aa14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 SPP2Q13103 211 aa14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 SHROOM1Q2M3G4 852 aaPredicted RBP14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 SLC9C1Q4G0N8 1177 aa14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 TREML2Q5T2D2 321 aa14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 MAPKAPK5Q8IW41 473 aa14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 RHPN1Q8TCX5 695 aa14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 PARK7Q99497 189 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 COG6Q9Y2V7 657 aa14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 RBBP6Q7Z6E9 1792 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-211ENST00000541667 DOCK1Q14185 1865 aa14.46□□□□□ -0.1
CLSTN3-211ENST00000541667 FLT1P17948 1338 aa14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 SLC34A2O95436 690 aa14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 KIF22Q14807 665 aa14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 PRPF38BQ5VTL8 546 aaKnown RBP14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 GADL1Q6ZQY3 521 aa14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 NBPF11Q86T75 865 aa14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 FOXP4Q8IVH2 680 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 RPAP2Q8IXW5 612 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 CDK5RAP2Q96SN8 1893 aa14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 DHX36Q9H2U1 1008 aaKnown RBP14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 IL1RAPL2Q9NP60 686 aa14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 HERC5Q9UII4 1024 aaKnown RBP14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 PALD1Q9ULE6 856 aa14.45□□□□□ -0.1
CLSTN3-211ENST00000541667 PLCG2P16885 1265 aa14.44□□□□□ -0.1
CLSTN3-211ENST00000541667 CYP7A1P22680 504 aa14.44□□□□□ -0.1
CLSTN3-211ENST00000541667 SH3D19Q5HYK7 790 aa14.44□□□□□ -0.1
CLSTN3-211ENST00000541667 AACSQ86V21 672 aa14.44□□□□□ -0.1
CLSTN3-211ENST00000541667 ZNF280CQ8ND82 737 aa14.44□□□□□ -0.1
CLSTN3-211ENST00000541667 WDR18Q9BV38 432 aa14.44□□□□□ -0.1
CLSTN3-211ENST00000541667 GABRQQ9UN88 632 aa14.44□□□□□ -0.1
CLSTN3-211ENST00000541667 AGTPBP1Q9UPW5 1226 aa14.44□□□□□ -0.1
CLSTN3-211ENST00000541667 FMNL1O95466 1100 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-211ENST00000541667 MS4A1P11836 297 aa14.43□□□□□ -0.1
CLSTN3-211ENST00000541667 MTFR1Q15390 333 aa14.43□□□□□ -0.1
CLSTN3-211ENST00000541667 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
CLSTN3-211ENST00000541667 ERC1Q8IUD2 1116 aa14.43□□□□□ -0.1
CLSTN3-211ENST00000541667 PROCA1Q8NCQ7 364 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-211ENST00000541667 FOCADQ5VW36 1801 aa14.43□□□□□ -0.1
CLSTN3-211ENST00000541667 DOCK3Q8IZD9 2030 aa14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 USP17L5A8MUK1 530 aa14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 IDH1O75874 414 aaKnown RBP14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 PRKCZQ05513 592 aa14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 MAGEB6Q8N7X4 407 aa14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 MIGA1Q8NAN2 632 aa14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 RIOK1Q9BRS2 568 aaKnown RBP14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 NOL10Q9BSC4 688 aaKnown RBP14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 TMEM106CQ9BVX2 250 aa14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 RCAN3Q9UKA8 241 aa14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 MAST2Q6P0Q8 1798 aa14.42□□□□□ -0.1
CLSTN3-211ENST00000541667 MYCP01106 439 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 HOXD10P28358 340 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 HMGCS2P54868 508 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 FCGRTP55899 365 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 HSP90AB4PQ58FF6 505 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 TATDN1Q6P1N9 297 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 POTEEQ6S8J3 1075 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 TBC1D2Q9BYX2 928 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 SAP30BPQ9UHR5 308 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 MGAMO43451 1857 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 ATAD5Q96QE3 1844 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 MYPNQ86TC9 1320 aa14.41□□□□□ -0.1
CLSTN3-211ENST00000541667 TCRBV5S4A2TA0A5A2 114 aa14.4□□□□□ -0.1
CLSTN3-211ENST00000541667 GRK4P32298 578 aa14.4□□□□□ -0.1
CLSTN3-211ENST00000541667 BACE1P56817 501 aa14.4□□□□□ -0.1
CLSTN3-211ENST00000541667 ANKRD13CQ8N6S4 541 aa14.4□□□□□ -0.1
CLSTN3-211ENST00000541667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.4□□□□□ -0.1
CLSTN3-211ENST00000541667 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
CLSTN3-211ENST00000541667 KIF1BPQ96EK5 621 aa14.4□□□□□ -0.1
CLSTN3-211ENST00000541667 ASCC2Q9H1I8 757 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-211ENST00000541667 GDF11O95390 407 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 ASNSP08243 561 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 HOXA7P31268 230 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 FLT3LGP49771 235 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 PLCD1P51178 756 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 EVX2Q03828 476 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 MAP3K12Q12852 859 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 SLC4A8Q2Y0W8 1093 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 TMED8Q6PL24 325 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 UBE2Q1Q7Z7E8 422 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 RAET1EQ8TD07 263 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 EDC3Q96F86 508 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 GINM1Q9NU53 330 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 GJD2Q9UKL4 321 aa14.39□□□□□ -0.11
CLSTN3-211ENST00000541667 LOC285556D6RIA3 1793 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms