RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 NME2P22392 152 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 ARNTP27540 789 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 TAF1CQ15572 869 aaPredicted RBP6.76□□□□□ -1.33
KNTC1-211ENST00000541427 CYP27C1Q4G0S4 372 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 LDLRAD1Q5T700 205 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 LILRA6Q6PI73 481 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 SV2BQ7L1I2 683 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 CILP2Q8IUL8 1156 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 BHLHE22Q8NFJ8 381 aaPredicted RBP6.76□□□□□ -1.33
KNTC1-211ENST00000541427 PI4K2BQ8TCG2 481 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 NETO1Q8TDF5 533 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 WDR89Q96FK6 387 aaPredicted RBP6.76□□□□□ -1.33
KNTC1-211ENST00000541427 CCDC86Q9H6F5 360 aaKnown RBP6.76□□□□□ -1.33
KNTC1-211ENST00000541427 AP4E1Q9UPM8 1137 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 USP31Q70CQ4 1352 aa6.76□□□□□ -1.33
KNTC1-211ENST00000541427 LRRC10BA6NIK2 292 aa6.75□□□□□ -1.33
KNTC1-211ENST00000541427 UNCXA6NJT0 531 aa6.75□□□□□ -1.33
KNTC1-211ENST00000541427 CD96P40200 585 aa6.75□□□□□ -1.33
KNTC1-211ENST00000541427 ST13P50502 369 aaKnown RBP6.75□□□□□ -1.33
KNTC1-211ENST00000541427 ZNF252P-AS1Q0IIN9 211 aa6.75□□□□□ -1.33
KNTC1-211ENST00000541427 CCDC85BQ15834 202 aaPredicted RBP6.75□□□□□ -1.33
KNTC1-211ENST00000541427 PCNX4Q63HM2 1172 aa6.75□□□□□ -1.33
KNTC1-211ENST00000541427 MPRIPQ6WCQ1 1025 aa6.75□□□□□ -1.33
KNTC1-211ENST00000541427 GRIN3AQ8TCU5 1115 aa6.75□□□□□ -1.33
KNTC1-211ENST00000541427 RAD18Q9NS91 495 aa6.75□□□□□ -1.33
KNTC1-211ENST00000541427 ZNF862O60290 1169 aa6.74□□□□□ -1.33
KNTC1-211ENST00000541427 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
KNTC1-211ENST00000541427 HP1BP3Q5SSJ5 553 aaPredicted RBP6.74□□□□□ -1.33
KNTC1-211ENST00000541427 FAM181AQ8N9Y4 354 aa6.74□□□□□ -1.33
KNTC1-211ENST00000541427 TOX2Q96NM4 488 aa6.74□□□□□ -1.33
KNTC1-211ENST00000541427 WDR18Q9BV38 432 aa6.74□□□□□ -1.33
KNTC1-211ENST00000541427 GSX1Q9H4S2 264 aaPredicted RBP6.74□□□□□ -1.33
KNTC1-211ENST00000541427 VAV3Q9UKW4 847 aa6.74□□□□□ -1.33
KNTC1-211ENST00000541427 PRRG2O14669 202 aa6.73□□□□□ -1.33
KNTC1-211ENST00000541427 LIG1P18858 919 aa6.73□□□□□ -1.33
KNTC1-211ENST00000541427 CFPP27918 469 aa6.73□□□□□ -1.33
KNTC1-211ENST00000541427 RAP1GAPP47736 663 aa6.73□□□□□ -1.33
KNTC1-211ENST00000541427 MAP1SQ66K74 1059 aaPredicted RBP6.73□□□□□ -1.33
KNTC1-211ENST00000541427 KCNB2Q92953 911 aa6.73□□□□□ -1.33
KNTC1-211ENST00000541427 ZNF428Q96B54 188 aa6.73□□□□□ -1.33
KNTC1-211ENST00000541427 CACNA2D2Q9NY47 1150 aa6.73□□□□□ -1.33
KNTC1-211ENST00000541427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.73□□□□□ -1.33
KNTC1-211ENST00000541427 NCANO14594 1321 aa6.73□□□□□ -1.33
KNTC1-211ENST00000541427 AOC2O75106 756 aa6.72□□□□□ -1.33
KNTC1-211ENST00000541427 RECKO95980 971 aa6.72□□□□□ -1.33
KNTC1-211ENST00000541427 PRKCQQ04759 706 aa6.72□□□□□ -1.33
KNTC1-211ENST00000541427 TTBK2Q6IQ55 1244 aa6.72□□□□□ -1.33
KNTC1-211ENST00000541427 NOC4LQ9BVI4 516 aaKnown RBP6.72□□□□□ -1.33
KNTC1-211ENST00000541427 EMILIN2Q9BXX0 1053 aa6.72□□□□□ -1.33
KNTC1-211ENST00000541427 BACH2Q9BYV9 841 aa6.72□□□□□ -1.33
KNTC1-211ENST00000541427 CBX8Q9HC52 389 aa6.72□□□□□ -1.33
KNTC1-211ENST00000541427 KRT82Q9NSB4 513 aa6.72□□□□□ -1.33
KNTC1-211ENST00000541427 KIAA1522Q9P206 1035 aaPredicted RBP6.72□□□□□ -1.33
KNTC1-211ENST00000541427 PCDHGC5Q9Y5F6 944 aa6.72□□□□□ -1.33
KNTC1-211ENST00000541427 F6X3S4 739 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 FAM87AP0C7U9 286 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 ITGAEP38570 1179 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 LIG3P49916 1009 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 MAP3K11Q16584 847 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 MLANAQ16655 118 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 KIF4BQ2VIQ3 1234 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 LLGL2Q6P1M3 1020 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 LCNL1Q6ZST4 164 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 C1QL4Q86Z23 238 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 ZSCAN18Q8TBC5 510 aaPredicted RBP6.71□□□□□ -1.34
KNTC1-211ENST00000541427 GPBAR1Q8TDU6 330 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 MRRFQ96E11 262 aaKnown RBP6.71□□□□□ -1.34
KNTC1-211ENST00000541427 SAMM50Q9Y512 469 aa6.71□□□□□ -1.34
KNTC1-211ENST00000541427 B8ZZF3 427 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 VAMP1P23763 118 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 PTPN11Q06124 597 aaPredicted RBP6.7□□□□□ -1.34
KNTC1-211ENST00000541427 CDK5R2Q13319 367 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 AOC3Q16853 763 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 ZSWIM9Q86XI8 627 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 LRRC56Q8IYG6 542 aaPredicted RBP6.7□□□□□ -1.34
KNTC1-211ENST00000541427 GAL3ST3Q96A11 431 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 FAM53CQ9NYF3 392 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 PPP1R9AQ9ULJ8 1098 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 CYP8B1Q9UNU6 501 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 TLR6Q9Y2C9 796 aa6.7□□□□□ -1.34
KNTC1-211ENST00000541427 ZNF503-AS2A6NEH8 195 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 TMPRSS2O15393 492 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 TRIM37O94972 964 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 RPS26P62854 115 aaKnown RBP6.69□□□□□ -1.34
KNTC1-211ENST00000541427 LRRC14Q15048 493 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 TSNAXIP1Q2TAA8 658 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 AGMOQ6ZNB7 445 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 TMEM87AQ8NBN3 555 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 FLAD1Q8NFF5 587 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 PCDHB5Q9Y5E4 795 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 U3KQE9 123 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 SYNGAP1Q96PV0 1343 aa6.69□□□□□ -1.34
KNTC1-211ENST00000541427 TSPAN15O95858 294 aa6.68□□□□□ -1.34
KNTC1-211ENST00000541427 TFE3P19532 575 aaPredicted RBP6.68□□□□□ -1.34
KNTC1-211ENST00000541427 KCNMB1Q16558 191 aa6.68□□□□□ -1.34
KNTC1-211ENST00000541427 IFI16Q16666 785 aaKnown RBP6.68□□□□□ -1.34
KNTC1-211ENST00000541427 ERMP1Q7Z2K6 904 aa6.68□□□□□ -1.34
KNTC1-211ENST00000541427 PHC3Q8NDX5 983 aa6.68□□□□□ -1.34
KNTC1-211ENST00000541427 HRASLS5Q96KN8 279 aa6.68□□□□□ -1.34
KNTC1-211ENST00000541427 KRTAP17-1Q9BYP8 105 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms