RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 NAIPQ13075 1403 aa17.01■□□□□ 0.31
HMGA2-210ENST00000541363 RBM8AQ9Y5S9 174 aaKnown RBP17.01■□□□□ 0.31
HMGA2-210ENST00000541363 IGSF3O75054 1194 aa17.01■□□□□ 0.31
HMGA2-210ENST00000541363 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
HMGA2-210ENST00000541363 RGS16O15492 202 aaPredicted RBP17.01■□□□□ 0.31
HMGA2-210ENST00000541363 PPFIA4O75335 1185 aa17.01■□□□□ 0.31
HMGA2-210ENST00000541363 P4HA1P13674 534 aa17.01■□□□□ 0.31
HMGA2-210ENST00000541363 MYL5Q02045 173 aa17.01■□□□□ 0.31
HMGA2-210ENST00000541363 S100BP04271 92 aaPredicted RBP17■□□□□ 0.31
HMGA2-210ENST00000541363 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
HMGA2-210ENST00000541363 RABEP2Q9H5N1 569 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 RASIP1Q5U651 963 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 PARP1P09874 1014 aaKnown RBP17■□□□□ 0.31
HMGA2-210ENST00000541363 HAUS3Q68CZ6 603 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 SETDB2Q96T68 719 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 TOP2AP11388 1531 aaKnown RBP17■□□□□ 0.31
HMGA2-210ENST00000541363 SESN3P58005 492 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 KRT81Q14533 505 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 POMGNT1Q8WZA1 660 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 HAUS1Q96CS2 278 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 CTTNBP2NLQ9P2B4 639 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 LRRD1A4D1F6 860 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 SPOUT1Q5T280 376 aaKnown RBP17■□□□□ 0.31
HMGA2-210ENST00000541363 PRPF6O94906 941 aaKnown RBP17■□□□□ 0.31
HMGA2-210ENST00000541363 ATP6V0A1Q93050 837 aa17■□□□□ 0.31
HMGA2-210ENST00000541363 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 RAD51AP2Q09MP3 1159 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 USHBP1Q8N6Y0 703 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 TEKT2Q9UIF3 430 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 CASP2P42575 452 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 ESRRGP62508 458 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 RSBN1LQ6PCB5 846 aaPredicted RBP16.99■□□□□ 0.31
HMGA2-210ENST00000541363 NOP56O00567 594 aaKnown RBP16.99■□□□□ 0.31
HMGA2-210ENST00000541363 U2AF2P26368 475 aaKnown RBP eCLIP16.99■□□□□ 0.316e-8■■□□□ 13.3
HMGA2-210ENST00000541363 SH2D4AQ9H788 454 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 CCNT1O60563 726 aaKnown RBP16.99■□□□□ 0.31
HMGA2-210ENST00000541363 PDE4DQ08499 809 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 ATL3Q6DD88 541 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 CEP19Q96LK0 163 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 VWA3AA6NCI4 1184 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 GNGT2O14610 69 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 CEP104O60308 925 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 BSPRYQ5W0U4 402 aa16.99■□□□□ 0.31
HMGA2-210ENST00000541363 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
HMGA2-210ENST00000541363 SPATS2Q86XZ4 545 aaKnown RBP16.99■□□□□ 0.31
HMGA2-210ENST00000541363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.98■□□□□ 0.31
HMGA2-210ENST00000541363 SLC52A1Q9NWF4 448 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 CHMP2AO43633 222 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
HMGA2-210ENST00000541363 PDE6AP16499 860 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 KLHL7Q8IXQ5 586 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 HDAC11Q96DB2 347 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 SYNRGQ9UMZ2 1314 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 M0QZ92 97 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 NOP9Q86U38 636 aaKnown RBP16.98■□□□□ 0.31
HMGA2-210ENST00000541363 CTAGE3PQ8IX95 158 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 HACE1Q8IYU2 909 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 ANKRD42Q8N9B4 389 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 TBC1D32Q96NH3 1257 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 CCDC68Q9H2F9 335 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 PYGLP06737 847 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 YWHAEP62258 255 aaKnown RBP16.98■□□□□ 0.31
HMGA2-210ENST00000541363 SKA2Q8WVK7 121 aaPredicted RBP16.98■□□□□ 0.31
HMGA2-210ENST00000541363 NRBF2Q96F24 287 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 SND1Q7KZF4 910 aaKnown RBP eCLIP16.98■□□□□ 0.31
HMGA2-210ENST00000541363 GRK7Q8WTQ7 553 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 VPS16Q9H269 839 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 FLOT1O75955 427 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 AMOTL2Q9Y2J4 779 aa16.98■□□□□ 0.31
HMGA2-210ENST00000541363 GARSP41250 739 aaKnown RBP16.97■□□□□ 0.31
HMGA2-210ENST00000541363 KRT71Q3SY84 523 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 CCDC138Q96M89 665 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 TSHZ3Q63HK5 1081 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 PEX26Q7Z412 305 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 CFAP61Q8NHU2 1237 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
HMGA2-210ENST00000541363 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
HMGA2-210ENST00000541363 ADAMTS2O95450 1211 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 NUCKS1Q9H1E3 243 aaKnown RBP16.97■□□□□ 0.31
HMGA2-210ENST00000541363 SUPT6HQ7KZ85 1726 aaKnown RBP16.97■□□□□ 0.31
HMGA2-210ENST00000541363 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 SF3A3Q12874 501 aaKnown RBP eCLIP16.97■□□□□ 0.31
HMGA2-210ENST00000541363 RPS6KA1Q15418 735 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 PKD2L1Q9P0L9 805 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 CAPN7Q9Y6W3 813 aa16.97■□□□□ 0.31
HMGA2-210ENST00000541363 C4orf50Q6ZRC1 276 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 NYXQ9GZU5 481 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 CCDC141Q6ZP82 1450 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 RIC8AQ9NPQ8 531 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 MCM9Q9NXL9 1143 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 TRIM50Q86XT4 487 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 ARHGEF35A5YM69 484 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 RPAINQ86UA6 219 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 CCDC61Q9Y6R9 512 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 RAD50Q92878 1312 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 HSPA8P11142 646 aaKnown RBP16.96■□□□□ 0.31
HMGA2-210ENST00000541363 SLC9C2Q5TAH2 1124 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 SUFUQ9UMX1 484 aa16.96■□□□□ 0.31
HMGA2-210ENST00000541363 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.31
HMGA2-210ENST00000541363 LRPPRCP42704 1394 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms