RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 SEC62Q99442 399 aaKnown RBP25.83■■□□□ 1.73
LINC00943-207ENST00000541359 WBP1LQ9NX94 342 aa25.83■■□□□ 1.73
LINC00943-207ENST00000541359 BAZ2AQ9UIF9 1905 aaKnown RBP25.82■■□□□ 1.72
LINC00943-207ENST00000541359 EVX2Q03828 476 aa25.82■■□□□ 1.72
LINC00943-207ENST00000541359 MKRN3Q13064 507 aaKnown RBP25.82■■□□□ 1.72
LINC00943-207ENST00000541359 RRP1BQ14684 758 aaKnown RBP25.82■■□□□ 1.72
LINC00943-207ENST00000541359 LRRFIP1Q32MZ4 808 aaKnown RBP25.82■■□□□ 1.72
LINC00943-207ENST00000541359 CSADQ9Y600 493 aa25.82■■□□□ 1.72
LINC00943-207ENST00000541359 SPDYE5A6NIY4 337 aa25.81■■□□□ 1.72
LINC00943-207ENST00000541359 ZBTB48P10074 688 aaPredicted RBP25.81■■□□□ 1.72
LINC00943-207ENST00000541359 SLC4A8Q2Y0W8 1093 aa25.81■■□□□ 1.72
LINC00943-207ENST00000541359 OPTNQ96CV9 577 aa25.81■■□□□ 1.72
LINC00943-207ENST00000541359 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.81■■□□□ 1.72
LINC00943-207ENST00000541359 HERC5Q9UII4 1024 aaKnown RBP25.81■■□□□ 1.72
LINC00943-207ENST00000541359 ATAD5Q96QE3 1844 aa25.8■■□□□ 1.72
LINC00943-207ENST00000541359 GPAA1O43292 621 aa25.8■■□□□ 1.72
LINC00943-207ENST00000541359 HSPA1AP0DMV8 641 aaKnown RBP25.8■■□□□ 1.72
LINC00943-207ENST00000541359 HSPA1BP0DMV9 641 aaKnown RBP25.8■■□□□ 1.72
LINC00943-207ENST00000541359 GSPT1P15170 499 aaKnown RBP25.8■■□□□ 1.72
LINC00943-207ENST00000541359 TICAM2Q86XR7 235 aa25.8■■□□□ 1.72
LINC00943-207ENST00000541359 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.8■■□□□ 1.72
LINC00943-207ENST00000541359 ATP8A2Q9NTI2 1148 aa25.8■■□□□ 1.72
LINC00943-207ENST00000541359 PHIPQ8WWQ0 1821 aa25.79■■□□□ 1.72
LINC00943-207ENST00000541359 PLCD1P51178 756 aa25.79■■□□□ 1.72
LINC00943-207ENST00000541359 MAP2K1Q02750 393 aaPredicted RBP25.79■■□□□ 1.72
LINC00943-207ENST00000541359 TTC22Q5TAA0 569 aa25.79■■□□□ 1.72
LINC00943-207ENST00000541359 FOXP4Q8IVH2 680 aaPredicted RBP25.79■■□□□ 1.72
LINC00943-207ENST00000541359 EHD4Q9H223 541 aa25.79■■□□□ 1.72
LINC00943-207ENST00000541359 SLC4A4Q9Y6R1 1079 aa25.79■■□□□ 1.72
LINC00943-207ENST00000541359 TRIM6-TRIM34B2RNG4 842 aa25.78■■□□□ 1.72
LINC00943-207ENST00000541359 HLA-DOAP06340 250 aa25.78■■□□□ 1.72
LINC00943-207ENST00000541359 CYP2D6P10635 497 aa25.78■■□□□ 1.72
LINC00943-207ENST00000541359 ERO1BQ86YB8 467 aa25.78■■□□□ 1.72
LINC00943-207ENST00000541359 SCYL3Q8IZE3 742 aa25.78■■□□□ 1.72
LINC00943-207ENST00000541359 MCM9Q9NXL9 1143 aa25.78■■□□□ 1.72
LINC00943-207ENST00000541359 GSG1L2A8MUP6 293 aa25.77■■□□□ 1.72
LINC00943-207ENST00000541359 CTNND1O60716 968 aaKnown RBP25.77■■□□□ 1.72
LINC00943-207ENST00000541359 GABPAQ06546 454 aa25.77■■□□□ 1.72
LINC00943-207ENST00000541359 SKAP1Q86WV1 359 aa25.77■■□□□ 1.72
LINC00943-207ENST00000541359 RILPL2Q969X0 211 aa25.77■■□□□ 1.72
LINC00943-207ENST00000541359 OTUD5Q96G74 571 aa25.77■■□□□ 1.72
LINC00943-207ENST00000541359 CCDC136Q96JN2 1154 aa25.77■■□□□ 1.72
LINC00943-207ENST00000541359 EPB41L4AQ9HCS5 686 aaPredicted RBP25.77■■□□□ 1.72
LINC00943-207ENST00000541359 A0A0D9SFI3 127 aa25.76■■□□□ 1.71
LINC00943-207ENST00000541359 SMIM22K7EJ46 135 aa25.76■■□□□ 1.71
LINC00943-207ENST00000541359 TTC6Q86TZ1 520 aa25.76■■□□□ 1.71
LINC00943-207ENST00000541359 MS4A4AQ96JQ5 239 aa25.76■■□□□ 1.71
LINC00943-207ENST00000541359 FAM227BQ96M60 508 aa25.76■■□□□ 1.71
LINC00943-207ENST00000541359 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.76■■□□□ 1.71
LINC00943-207ENST00000541359 FOXP2O15409 715 aa25.75■■□□□ 1.71
LINC00943-207ENST00000541359 TM4SF4P48230 202 aa25.75■■□□□ 1.71
LINC00943-207ENST00000541359 JAG1P78504 1218 aa25.75■■□□□ 1.71
LINC00943-207ENST00000541359 PPIL2Q13356 520 aa25.75■■□□□ 1.71
LINC00943-207ENST00000541359 CCDC129Q6ZRS4 1044 aa25.75■■□□□ 1.71
LINC00943-207ENST00000541359 REM2Q8IYK8 340 aaPredicted RBP25.75■■□□□ 1.71
LINC00943-207ENST00000541359 SERPINB13Q9UIV8 391 aa25.75■■□□□ 1.71
LINC00943-207ENST00000541359 TESPA1A2RU30 521 aaPredicted RBP25.74■■□□□ 1.71
LINC00943-207ENST00000541359 POLR3DP05423 398 aaPredicted RBP25.74■■□□□ 1.71
LINC00943-207ENST00000541359 PTPRAP18433 802 aa25.74■■□□□ 1.71
LINC00943-207ENST00000541359 SDSP20132 328 aa25.74■■□□□ 1.71
LINC00943-207ENST00000541359 CAP2P40123 477 aa25.74■■□□□ 1.71
LINC00943-207ENST00000541359 PPATQ06203 517 aa25.74■■□□□ 1.71
LINC00943-207ENST00000541359 NMIQ13287 307 aaPredicted RBP25.74■■□□□ 1.71
LINC00943-207ENST00000541359 SHROOM1Q2M3G4 852 aaPredicted RBP25.74■■□□□ 1.71
LINC00943-207ENST00000541359 ERICH6BQ5W0A0 696 aa25.74■■□□□ 1.71
LINC00943-207ENST00000541359 TATDN1Q6P1N9 297 aa25.74■■□□□ 1.71
LINC00943-207ENST00000541359 CRACR2BQ8N4Y2 399 aaPredicted RBP25.74■■□□□ 1.71
LINC00943-207ENST00000541359 HELLSQ9NRZ9 838 aa25.74■■□□□ 1.71
LINC00943-207ENST00000541359 CYP2D7A0A087X1C5 515 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 MANSC4A6NHS7 340 aaPredicted RBP25.73■■□□□ 1.71
LINC00943-207ENST00000541359 USP17L12C9JPN9 530 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 USP17L21D6R901 530 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 IRF6O14896 467 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 FOXN1O15353 648 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 GNAT2P19087 354 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 SHMT1P34896 483 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 C12orf60Q5U649 245 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 GIMAP6Q6P9H5 292 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 CTR9Q6PD62 1173 aa25.73■■□□□ 1.71
LINC00943-207ENST00000541359 KCNH4Q9UQ05 1017 aa25.72■■□□□ 1.71
LINC00943-207ENST00000541359 PTPRFP10586 1907 aa25.72■■□□□ 1.71
LINC00943-207ENST00000541359 PATL2C9JE40 543 aaKnown RBP25.71■■□□□ 1.71
LINC00943-207ENST00000541359 SREBF2Q12772 1141 aa25.71■■□□□ 1.71
LINC00943-207ENST00000541359 SBK1Q52WX2 424 aa25.71■■□□□ 1.71
LINC00943-207ENST00000541359 CCDC84Q86UT8 332 aaPredicted RBP25.71■■□□□ 1.71
LINC00943-207ENST00000541359 PTPN18Q99952 460 aa25.71■■□□□ 1.71
LINC00943-207ENST00000541359 PICK1Q9NRD5 415 aa25.71■■□□□ 1.71
LINC00943-207ENST00000541359 IGF2BP3O00425 579 aaKnown RBP eCLIP25.7■■□□□ 1.7
LINC00943-207ENST00000541359 MCMDC2Q4G0Z9 681 aa25.7■■□□□ 1.7
LINC00943-207ENST00000541359 ZNF589Q86UQ0 364 aaPredicted RBP25.7■■□□□ 1.7
LINC00943-207ENST00000541359 SLC44A5Q8NCS7 719 aa25.7■■□□□ 1.7
LINC00943-207ENST00000541359 BRI3BPQ8WY22 251 aa25.7■■□□□ 1.7
LINC00943-207ENST00000541359 DYNLL2Q96FJ2 89 aa25.7■■□□□ 1.7
LINC00943-207ENST00000541359 TRIM34Q9BYJ4 488 aa25.7■■□□□ 1.7
LINC00943-207ENST00000541359 RNF186Q9NXI6 227 aa25.7■■□□□ 1.7
LINC00943-207ENST00000541359 GDF11O95390 407 aa25.69■■□□□ 1.7
LINC00943-207ENST00000541359 GTF2A2P52657 109 aa25.69■■□□□ 1.7
LINC00943-207ENST00000541359 IFNL3Q8IZI9 196 aa25.69■■□□□ 1.7
LINC00943-207ENST00000541359 ARPP21Q9UBL0 812 aaPredicted RBP25.69■■□□□ 1.7
LINC00943-207ENST00000541359 AFG3L2Q9Y4W6 797 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms