RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 AKNAD1Q5T1N1 836 aa19.89■□□□□ 0.77
SPIDR-227ENST00000541342 GOLGA8BA8MQT2 603 aa19.89■□□□□ 0.77
SPIDR-227ENST00000541342 ZBTB22O15209 634 aa19.89■□□□□ 0.77
SPIDR-227ENST00000541342 HOXA10P31260 410 aaPredicted RBP19.89■□□□□ 0.77
SPIDR-227ENST00000541342 ANGEL1Q9UNK9 670 aaKnown RBP19.89■□□□□ 0.77
SPIDR-227ENST00000541342 SMIM22K7EJ46 135 aa19.88■□□□□ 0.77
SPIDR-227ENST00000541342 UTP14CQ5TAP6 766 aaKnown RBP19.88■□□□□ 0.77
SPIDR-227ENST00000541342 IGDCC4Q8TDY8 1250 aa19.88■□□□□ 0.77
SPIDR-227ENST00000541342 ZSWIM5Q9P217 1185 aa19.88■□□□□ 0.77
SPIDR-227ENST00000541342 GUCY1B3Q02153 619 aa19.88■□□□□ 0.77
SPIDR-227ENST00000541342 STAG1Q8WVM7 1258 aa19.88■□□□□ 0.77
SPIDR-227ENST00000541342 CTAGE5O15320 804 aa19.87■□□□□ 0.77
SPIDR-227ENST00000541342 FDPSP14324 419 aaKnown RBP19.87■□□□□ 0.77
SPIDR-227ENST00000541342 FAM160A1Q05DH4 1040 aa19.87■□□□□ 0.77
SPIDR-227ENST00000541342 RGS17Q9UGC6 210 aaPredicted RBP19.87■□□□□ 0.77
SPIDR-227ENST00000541342 LTBP1Q14766 1721 aa19.87■□□□□ 0.77
SPIDR-227ENST00000541342 KIAA1551Q9HCM1 1747 aa19.87■□□□□ 0.77
SPIDR-227ENST00000541342 LRRC37AA6NMS7 1700 aa19.87■□□□□ 0.77
SPIDR-227ENST00000541342 GOLGA6L19H0YKK7 550 aa19.87■□□□□ 0.77
SPIDR-227ENST00000541342 STK11IPQ8N1F8 1099 aa19.87■□□□□ 0.77
SPIDR-227ENST00000541342 SYCP1Q15431 976 aa19.87■□□□□ 0.77
SPIDR-227ENST00000541342 TPD52L1Q16890 204 aaPredicted RBP19.87■□□□□ 0.77
SPIDR-227ENST00000541342 HMGB2P26583 209 aaKnown RBP19.86■□□□□ 0.77
SPIDR-227ENST00000541342 CCZ1BP86790 482 aa19.86■□□□□ 0.77
SPIDR-227ENST00000541342 CCZ1P86791 482 aaPredicted RBP19.86■□□□□ 0.77
SPIDR-227ENST00000541342 PPARAQ07869 468 aa19.86■□□□□ 0.77
SPIDR-227ENST00000541342 MFSD6Q6ZSS7 791 aa19.86■□□□□ 0.77
SPIDR-227ENST00000541342 C15orf52Q6ZUT6 534 aaKnown RBP19.86■□□□□ 0.77
SPIDR-227ENST00000541342 LY9Q9HBG7 655 aa19.86■□□□□ 0.77
SPIDR-227ENST00000541342 NYAP1Q6ZVC0 841 aa19.86■□□□□ 0.77
SPIDR-227ENST00000541342 TMEM87BQ96K49 555 aa19.86■□□□□ 0.77
SPIDR-227ENST00000541342 PAXBP1Q9Y5B6 917 aa19.86■□□□□ 0.77
SPIDR-227ENST00000541342 BBOX1O75936 387 aa19.85■□□□□ 0.77
SPIDR-227ENST00000541342 UFL1O94874 794 aa19.85■□□□□ 0.77
SPIDR-227ENST00000541342 FMR1NBQ8N0W7 255 aaPredicted RBP19.85■□□□□ 0.77
SPIDR-227ENST00000541342 NLGN1Q8N2Q7 840 aa19.85■□□□□ 0.77
SPIDR-227ENST00000541342 FSIP1Q8NA03 581 aa19.85■□□□□ 0.77
SPIDR-227ENST00000541342 CRAMP1Q96RY5 1269 aa19.85■□□□□ 0.77
SPIDR-227ENST00000541342 CNNM2Q9H8M5 875 aa19.85■□□□□ 0.77
SPIDR-227ENST00000541342 AATFQ9NY61 560 aaKnown RBP eCLIP19.85■□□□□ 0.77
SPIDR-227ENST00000541342 CCDC73Q6ZRK6 1079 aa19.85■□□□□ 0.77
SPIDR-227ENST00000541342 ZHX1Q9UKY1 873 aaPredicted RBP19.85■□□□□ 0.77
SPIDR-227ENST00000541342 PCDHA7Q9UN72 937 aa19.85■□□□□ 0.77
SPIDR-227ENST00000541342 NBPF11Q86T75 865 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 KRT23Q9C075 422 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 RGPD3A6NKT7 1758 aaPredicted RBP19.84■□□□□ 0.77
SPIDR-227ENST00000541342 RGPD4Q7Z3J3 1758 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 MINDY4BA8MYZ0 360 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 KINO60870 393 aaKnown RBP19.84■□□□□ 0.77
SPIDR-227ENST00000541342 ME1P48163 572 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 GRIK5Q16478 980 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 CEP135Q66GS9 1140 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 ATL3Q6DD88 541 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 ZNF804AQ7Z570 1209 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 BRIP1Q9BX63 1249 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 ANAPC4Q9UJX5 808 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
SPIDR-227ENST00000541342 CYP2D7A0A087X1C5 515 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 SKILP12757 684 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 RRP12Q5JTH9 1297 aaKnown RBP19.84■□□□□ 0.77
SPIDR-227ENST00000541342 APOA5Q6Q788 366 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 POLLQ9UGP5 575 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 GGA1Q9UJY5 639 aa19.84■□□□□ 0.77
SPIDR-227ENST00000541342 RXRAP19793 462 aa19.83■□□□□ 0.77
SPIDR-227ENST00000541342 TMEM67Q5HYA8 995 aa19.83■□□□□ 0.77
SPIDR-227ENST00000541342 CCDC112Q8NEF3 446 aa19.83■□□□□ 0.77
SPIDR-227ENST00000541342 PODXL2Q9NZ53 605 aa19.83■□□□□ 0.77
SPIDR-227ENST00000541342 CCDC69A6NI79 296 aa19.83■□□□□ 0.76
SPIDR-227ENST00000541342 ATP2B4P23634 1241 aa19.83■□□□□ 0.76
SPIDR-227ENST00000541342 SGMS1Q86VZ5 419 aa19.83■□□□□ 0.76
SPIDR-227ENST00000541342 AOPEPQ8N6M6 819 aa19.83■□□□□ 0.76
SPIDR-227ENST00000541342 ANO10Q9NW15 660 aa19.83■□□□□ 0.76
SPIDR-227ENST00000541342 GOLGB1Q14789 3259 aaKnown RBP19.83■□□□□ 0.76
SPIDR-227ENST00000541342 ZNF396Q96N95 335 aaPredicted RBP19.82■□□□□ 0.76
SPIDR-227ENST00000541342 LAMB1P07942 1786 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 DUOX1Q9NRD9 1551 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 MYH2Q9UKX2 1941 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 EVX2Q03828 476 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 OTUD7BQ6GQQ9 843 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 POTEAQ6S8J7 498 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 FILIP1Q7Z7B0 1213 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 CHMP4CQ96CF2 233 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 ZKSCAN3Q9BRR0 538 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 CTR9Q6PD62 1173 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 TBC1D16Q8TBP0 767 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 WDR66Q8TBY9 1149 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 TOMM22Q9NS69 142 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 ECM29Q5VYK3 1845 aa19.82■□□□□ 0.76
SPIDR-227ENST00000541342 A0A1B0GVL5 298 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 BECN2A8MW95 431 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 IFIT3O14879 490 aaKnown RBP19.81■□□□□ 0.76
SPIDR-227ENST00000541342 DHX16O60231 1041 aaKnown RBP19.81■□□□□ 0.76
SPIDR-227ENST00000541342 LIFRP42702 1097 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 NDUFA8P51970 172 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 DZIP1Q86YF9 867 aaKnown RBP19.81■□□□□ 0.76
SPIDR-227ENST00000541342 FBXW7Q969H0 707 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 MYL10Q9BUA6 226 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 CD209Q9NNX6 404 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 RTEL1Q9NZ71 1219 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 NEMFO60524 1076 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms