RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 RIMS1Q86UR5 1692 aaKnown RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 A0A0U1RQJ8 604 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 TESPA1A2RU30 521 aaPredicted RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 BECN2A8MW95 431 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 LIN7AO14910 233 aaPredicted RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 KRT38O76015 456 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 ATP5JP18859 108 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 PSME1Q06323 249 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 SF3B2Q13435 895 aaKnown RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 BTG3Q14201 252 aaPredicted RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 DPY19L2Q6NUT2 758 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 OLFML1Q6UWY5 402 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 ATRIPQ8WXE1 791 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 GDAP1L1Q96MZ0 367 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 CAPS2Q9BXY5 557 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 PCMTD2Q9NV79 361 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 ADGRB2O60241 1585 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 EIF2AK4Q9P2K8 1649 aaKnown RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 FAM83GA6ND36 823 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 VIL1P09327 827 aaKnown RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 HDGFP51858 240 aaKnown RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 CHMP4BP1P59074 171 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 VSNL1P62760 191 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 DCTN1Q14203 1278 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 ME3Q16798 604 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 KIF4BQ2VIQ3 1234 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 NUGGCQ68CJ6 796 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 SMYD1Q8NB12 490 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 FAM76AQ8TAV0 307 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 SPIRE2Q8WWL2 714 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 SPATA32Q96LK8 384 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 ZNF570Q96NI8 536 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 BRD8Q9H0E9 1235 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 POLD4Q9HCU8 107 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 AATFQ9NY61 560 aaKnown RBP eCLIP8.35□□□□□ -1.07
PPME1-206ENST00000541340 PUF60Q9UHX1 559 aaKnown RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 HOOK1Q9UJC3 728 aaKnown RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 C15orf41Q9Y2V0 281 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 THRAP3Q9Y2W1 955 aaKnown RBP8.35□□□□□ -1.07
PPME1-206ENST00000541340 EVC2Q86UK5 1308 aa8.35□□□□□ -1.07
PPME1-206ENST00000541340 KIF3BO15066 747 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 CREB3O43889 395 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 UPP2O95045 317 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 HMOX1P09601 288 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 FOSBP53539 338 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 KRT85P78386 507 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 TMED1Q13445 227 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 BLMHQ13867 455 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 HOOK3Q86VS8 718 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 ATP11CQ8NB49 1132 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 CCDC150Q8NCX0 1101 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 LEO1Q8WVC0 666 aaPredicted RBP8.34□□□□□ -1.07
PPME1-206ENST00000541340 DHX58Q96C10 678 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 DTNBP1Q96EV8 351 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 TRPV5Q9NQA5 729 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 MBIPQ9NS73 344 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 IFNKQ9P0W0 207 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 IMPACTQ9P2X3 320 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 ITM2BQ9Y287 266 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 PIK3R4Q99570 1358 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 NEURL4Q96JN8 1562 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 PTCH1Q13635 1447 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 POTEB2H3BUK9 544 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 NDUFAB1O14561 156 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 MGRN1O60291 552 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 PARP1P09874 1014 aaKnown RBP8.34□□□□□ -1.07
PPME1-206ENST00000541340 FUT4P22083 530 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 SFPQP23246 707 aaKnown RBP eCLIP8.34□□□□□ -1.07
PPME1-206ENST00000541340 HSPA4P34932 840 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 CTCFP49711 727 aaPredicted RBP8.34□□□□□ -1.07
PPME1-206ENST00000541340 GNGT1P63211 74 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 PPFIA1Q13136 1202 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 CCDC57Q2TAC2 916 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 RBM26Q5T8P6 1007 aaKnown RBP8.34□□□□□ -1.07
PPME1-206ENST00000541340 TBC1D31Q96DN5 1066 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 RMDN2Q96LZ7 410 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 POLR3CQ9BUI4 534 aaPredicted RBP8.34□□□□□ -1.07
PPME1-206ENST00000541340 LIMCH1Q9UPQ0 1083 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 ATP6V1DQ9Y5K8 247 aa8.34□□□□□ -1.07
PPME1-206ENST00000541340 ZC3H4Q9UPT8 1303 aaKnown RBP8.34□□□□□ -1.07
PPME1-206ENST00000541340 MAP3K13O43283 966 aa8.34□□□□□ -1.08
PPME1-206ENST00000541340 BUB1BO60566 1050 aaPredicted RBP8.34□□□□□ -1.08
PPME1-206ENST00000541340 WDHD1O75717 1129 aaPredicted RBP8.34□□□□□ -1.08
PPME1-206ENST00000541340 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.08
PPME1-206ENST00000541340 GNAQP50148 359 aa8.34□□□□□ -1.08
PPME1-206ENST00000541340 ENOX2Q16206 610 aaKnown RBP8.34□□□□□ -1.08
PPME1-206ENST00000541340 TWISTNBQ3B726 338 aaPredicted RBP8.34□□□□□ -1.08
PPME1-206ENST00000541340 LARP1BQ659C4 914 aaKnown RBP8.34□□□□□ -1.08
PPME1-206ENST00000541340 TTC30AQ86WT1 665 aa8.34□□□□□ -1.08
PPME1-206ENST00000541340 TRIM11Q96F44 468 aa8.34□□□□□ -1.08
PPME1-206ENST00000541340 VIPAS39Q9H9C1 493 aa8.34□□□□□ -1.08
PPME1-206ENST00000541340 HYPKQ9NX55 129 aa8.34□□□□□ -1.08
PPME1-206ENST00000541340 GALNT8Q9NY28 637 aa8.34□□□□□ -1.08
PPME1-206ENST00000541340 TUBGCP4Q9UGJ1 667 aa8.34□□□□□ -1.08
PPME1-206ENST00000541340 WDR37Q9Y2I8 494 aa8.34□□□□□ -1.08
PPME1-206ENST00000541340 C3P01024 1663 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 VWA3AA6NCI4 1184 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 OPLAHO14841 1288 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms