RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 TCEANC2Q96MN5 208 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 HPDP32754 393 aaPredicted RBP11.14□□□□□ -0.63
TRERF1-205ENST00000541110 TNNC1P63316 161 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 SPAG1Q07617 926 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 PPP2R5AQ15172 486 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 ATP2A3Q93084 1043 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 DAPK1P53355 1430 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 SYNJ2BP-COX16A0A087WUM0 186 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 GRM8O00222 908 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 Q3C1V9 767 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 MICAL1Q8TDZ2 1067 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 RPS6KC1Q96S38 1066 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 COX16Q9P0S2 106 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 GRIN2BQ13224 1484 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 FAM83GA6ND36 823 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 SLC4A1P02730 911 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 PALM2Q8IXS6 379 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 VCXQ9H320 206 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 CFTRP13569 1480 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 RAD51AP2Q09MP3 1159 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 LMBR1LQ6UX01 489 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 NSMFQ6X4W1 530 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 PKNOX2Q96KN3 472 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 BAG1Q99933 345 aaPredicted RBP11.14□□□□□ -0.63
TRERF1-205ENST00000541110 NOC4LQ9BVI4 516 aaKnown RBP11.14□□□□□ -0.63
TRERF1-205ENST00000541110 MYO1AQ9UBC5 1043 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 STK24Q9Y6E0 443 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 KIF14Q15058 1648 aa11.14□□□□□ -0.63
TRERF1-205ENST00000541110 RSAD2Q8WXG1 361 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 GTF2A1P52655 376 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-205ENST00000541110 IGBP1P78318 339 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 RNASELQ05823 741 aaKnown RBP11.13□□□□□ -0.63
TRERF1-205ENST00000541110 PFDN6O15212 129 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 GBP1P32455 592 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 NUCB1Q02818 461 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 HAUS3Q68CZ6 603 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 NCAPG2Q86XI2 1143 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 RBM46Q8TBY0 533 aaKnown RBP11.13□□□□□ -0.63
TRERF1-205ENST00000541110 APOL6Q9BWW8 343 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 VPS18Q9P253 973 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 NPHP3Q7Z494 1330 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 OTUD6AQ7L8S5 288 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 NFATC2IPQ8NCF5 419 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 CFBP00751 764 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 S100BP04271 92 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-205ENST00000541110 VAV2P52735 878 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 OTUD7BQ6GQQ9 843 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 SUPT20HQ8NEM7 779 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 CCDC68Q9H2F9 335 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 CNPY2Q9Y2B0 182 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 LRRC9Q6ZRR7 1453 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 SEPT8Q92599 483 aa11.13□□□□□ -0.63
TRERF1-205ENST00000541110 AATFQ9NY61 560 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRERF1-205ENST00000541110 TESPA1A2RU30 521 aaPredicted RBP11.12□□□□□ -0.63
TRERF1-205ENST00000541110 PPIP5K2O43314 1243 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 HS1BP3Q53T59 392 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
TRERF1-205ENST00000541110 DENND2AQ9ULE3 1009 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 NKTRP30414 1462 aaKnown RBP11.12□□□□□ -0.63
TRERF1-205ENST00000541110 PPFIA2O75334 1257 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 KIAA1841Q6NSI8 718 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 CACNA2D3Q8IZS8 1091 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 RUSC2Q8N2Y8 1516 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 CD109Q6YHK3 1445 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 KIAA1107Q9UPP5 1409 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 BAG5Q9UL15 447 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 ASIC3Q9UHC3 531 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 RBM8AQ9Y5S9 174 aaKnown RBP11.12□□□□□ -0.63
TRERF1-205ENST00000541110 FOXD4Q12950 439 aaPredicted RBP11.12□□□□□ -0.63
TRERF1-205ENST00000541110 MRPS27Q92552 414 aaKnown RBP11.12□□□□□ -0.63
TRERF1-205ENST00000541110 MCUR1Q96AQ8 359 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 SLC7A5P2Q9GIP4 190 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 BTG4Q9NY30 223 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 CNNM4Q6P4Q7 775 aa11.12□□□□□ -0.63
TRERF1-205ENST00000541110 IL15P40933 162 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-205ENST00000541110 PDE4DQ08499 809 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 APOBRQ0VD83 1088 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 HP1BP3Q5SSJ5 553 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-205ENST00000541110 TTC22Q5TAA0 569 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 CNGA4Q8IV77 575 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 GCNAQ96QF7 691 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 TRIM31Q9BZY9 425 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 IPO11Q9UI26 975 aaKnown RBP11.11□□□□□ -0.63
TRERF1-205ENST00000541110 IVLP07476 585 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 STMN1P16949 149 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 TXKP42681 527 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 LGSNQ5TDP6 509 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 PPP4R1Q8TF05 950 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 BACH2Q9BYV9 841 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 RBSNQ9H1K0 784 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 RTEL1Q9NZ71 1219 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-205ENST00000541110 NLRX1Q86UT6 975 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 PDE6BP35913 854 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 SLC1A4P43007 532 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms