RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SP3Q02447 781 aa17.25■□□□□ 0.35
LTBR-209ENST00000541102 NUCB1Q02818 461 aa17.25■□□□□ 0.35
LTBR-209ENST00000541102 PKN2Q16513 984 aaKnown RBP17.25■□□□□ 0.35
LTBR-209ENST00000541102 SLC4A8Q2Y0W8 1093 aa17.25■□□□□ 0.35
LTBR-209ENST00000541102 CCDC84Q86UT8 332 aaPredicted RBP17.25■□□□□ 0.35
LTBR-209ENST00000541102 CD99L2Q8TCZ2 262 aa17.25■□□□□ 0.35
LTBR-209ENST00000541102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.25■□□□□ 0.35
LTBR-209ENST00000541102 EDC3Q96F86 508 aaKnown RBP17.25■□□□□ 0.35
LTBR-209ENST00000541102 ERO1AQ96HE7 468 aa17.25■□□□□ 0.35
LTBR-209ENST00000541102 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
LTBR-209ENST00000541102 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.25■□□□□ 0.35
LTBR-209ENST00000541102 PI4KBQ9UBF8 816 aa17.25■□□□□ 0.35
LTBR-209ENST00000541102 PALD1Q9ULE6 856 aa17.25■□□□□ 0.35
LTBR-209ENST00000541102 FLT1P17948 1338 aa17.24■□□□□ 0.35
LTBR-209ENST00000541102 SALL3Q9BXA9 1300 aa17.24■□□□□ 0.35
LTBR-209ENST00000541102 CXCL11O14625 94 aa17.24■□□□□ 0.35
LTBR-209ENST00000541102 USP5P45974 858 aa17.24■□□□□ 0.35
LTBR-209ENST00000541102 SLC9C2Q5TAH2 1124 aa17.24■□□□□ 0.35
LTBR-209ENST00000541102 DHX36Q9H2U1 1008 aaKnown RBP17.24■□□□□ 0.35
LTBR-209ENST00000541102 HPS5Q9UPZ3 1129 aa17.24■□□□□ 0.35
LTBR-209ENST00000541102 TRIM17Q9Y577 477 aa17.24■□□□□ 0.35
LTBR-209ENST00000541102 LAMB1P07942 1786 aa17.24■□□□□ 0.35
LTBR-209ENST00000541102 MAST2Q6P0Q8 1798 aa17.24■□□□□ 0.35
LTBR-209ENST00000541102 PDE6AP16499 860 aa17.23■□□□□ 0.35
LTBR-209ENST00000541102 ATP5JP18859 108 aa17.23■□□□□ 0.35
LTBR-209ENST00000541102 RRP1BQ14684 758 aaKnown RBP17.23■□□□□ 0.35
LTBR-209ENST00000541102 ANKRD23Q86SG2 305 aa17.23■□□□□ 0.35
LTBR-209ENST00000541102 CHD1LQ86WJ1 897 aa17.23■□□□□ 0.35
LTBR-209ENST00000541102 SKAP1Q86WV1 359 aa17.23■□□□□ 0.35
LTBR-209ENST00000541102 CRACR2BQ8N4Y2 399 aaPredicted RBP17.23■□□□□ 0.35
LTBR-209ENST00000541102 TRIM34Q9BYJ4 488 aa17.23■□□□□ 0.35
LTBR-209ENST00000541102 PAG1Q9NWQ8 432 aa17.23■□□□□ 0.35
LTBR-209ENST00000541102 AFG3L2Q9Y4W6 797 aa17.23■□□□□ 0.35
LTBR-209ENST00000541102 COL2A1P02458 1487 aaPredicted RBP17.23■□□□□ 0.35
LTBR-209ENST00000541102 MAGEB6P1A0A0J9YX57 407 aa17.22■□□□□ 0.35
LTBR-209ENST00000541102 TRIM75PA6NK02 468 aa17.22■□□□□ 0.35
LTBR-209ENST00000541102 PDHXO00330 501 aa17.22■□□□□ 0.35
LTBR-209ENST00000541102 MOGSQ13724 837 aa17.22■□□□□ 0.35
LTBR-209ENST00000541102 FBXO46Q6PJ61 603 aaPredicted RBP17.22■□□□□ 0.35
LTBR-209ENST00000541102 GADL1Q6ZQY3 521 aa17.22■□□□□ 0.35
LTBR-209ENST00000541102 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
LTBR-209ENST00000541102 FOXP4Q8IVH2 680 aaPredicted RBP17.22■□□□□ 0.35
LTBR-209ENST00000541102 ZCCHC17Q9NP64 241 aaKnown RBP17.22■□□□□ 0.35
LTBR-209ENST00000541102 HERC5Q9UII4 1024 aaKnown RBP17.22■□□□□ 0.35
LTBR-209ENST00000541102 ZNF532Q9HCE3 1301 aa17.21■□□□□ 0.35
LTBR-209ENST00000541102 TLR2O60603 784 aa17.21■□□□□ 0.35
LTBR-209ENST00000541102 ECM2O94769 699 aaPredicted RBP17.21■□□□□ 0.35
LTBR-209ENST00000541102 HLA-DOAP06340 250 aa17.21■□□□□ 0.35
LTBR-209ENST00000541102 PDE4AP27815 886 aa17.21■□□□□ 0.35
LTBR-209ENST00000541102 CAP2P40123 477 aa17.21■□□□□ 0.35
LTBR-209ENST00000541102 FASTKD5Q7L8L6 764 aaKnown RBP17.21■□□□□ 0.35
LTBR-209ENST00000541102 CERS3Q8IU89 383 aa17.21■□□□□ 0.35
LTBR-209ENST00000541102 EFCC1Q9HA90 598 aa17.21■□□□□ 0.35
LTBR-209ENST00000541102 A0A0G2JLL6 359 aaPredicted RBP17.2■□□□□ 0.34
LTBR-209ENST00000541102 CAP1Q01518 475 aa17.2■□□□□ 0.34
LTBR-209ENST00000541102 GPAT2Q6NUI2 795 aa17.2■□□□□ 0.34
LTBR-209ENST00000541102 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
LTBR-209ENST00000541102 PRRT2Q7Z6L0 340 aaPredicted RBP17.2■□□□□ 0.34
LTBR-209ENST00000541102 HAUS7Q99871 368 aa17.2■□□□□ 0.34
LTBR-209ENST00000541102 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
LTBR-209ENST00000541102 CPA4Q9UI42 421 aa17.2■□□□□ 0.34
LTBR-209ENST00000541102 SOX10P56693 466 aa17.19■□□□□ 0.34
LTBR-209ENST00000541102 SPP2Q13103 211 aa17.19■□□□□ 0.34
LTBR-209ENST00000541102 SLFNL1Q499Z3 407 aa17.19■□□□□ 0.34
LTBR-209ENST00000541102 PI4K2BQ8TCG2 481 aa17.19■□□□□ 0.34
LTBR-209ENST00000541102 ECHDC1Q9NTX5 307 aa17.19■□□□□ 0.34
LTBR-209ENST00000541102 TCRBV5S4A2TA0A5A2 114 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 CYP2C8P10632 490 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 MX1P20591 662 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 ARHGEF6Q15052 776 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 PLEKHM2Q8IWE5 1019 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 ZNF280CQ8ND82 737 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 CCDC136Q96JN2 1154 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
LTBR-209ENST00000541102 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■■□□ 15.4
LTBR-209ENST00000541102 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 DOCK1Q14185 1865 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 CDK5RAP2Q96SN8 1893 aa17.18■□□□□ 0.34
LTBR-209ENST00000541102 GDF11O95390 407 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 PDE1AP54750 535 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 JAG1P78504 1218 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 KIF22Q14807 665 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 C17orf99Q6UX52 265 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 TTC6Q86TZ1 520 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 LCORLQ8N3X6 602 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 GPATCH3Q96I76 525 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 PARK7Q99497 189 aaKnown RBP17.17■□□□□ 0.34
LTBR-209ENST00000541102 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 STAP2Q9UGK3 403 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 PTPN22Q9Y2R2 807 aa17.17■□□□□ 0.34
LTBR-209ENST00000541102 CHGBP05060 677 aa17.16■□□□□ 0.34
LTBR-209ENST00000541102 POLR3DP05423 398 aaPredicted RBP17.16■□□□□ 0.34
LTBR-209ENST00000541102 ADD2P35612 726 aa17.16■□□□□ 0.34
LTBR-209ENST00000541102 LACTBP83111 547 aaPredicted RBP17.16■□□□□ 0.34
LTBR-209ENST00000541102 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
LTBR-209ENST00000541102 METTL16Q86W50 562 aaKnown RBP17.16■□□□□ 0.34
LTBR-209ENST00000541102 ARHGAP39Q9C0H5 1083 aa17.16■□□□□ 0.34
LTBR-209ENST00000541102 AS3MTQ9HBK9 375 aa17.16■□□□□ 0.34
LTBR-209ENST00000541102 PPP4R2Q9NY27 417 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms