RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 LIFRP42702 1097 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 CRKP46108 304 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 GRIPAP1Q4V328 841 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 MICU3Q86XE3 530 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 LARGE2Q8N3Y3 721 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 TEKT1Q969V4 418 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 LLPHQ9BRT6 129 aaKnown RBP28.81■■■□□ 2.2
TTC3-225ENST00000540756 DDX60LQ5H9U9 1706 aaKnown RBP28.8■■■□□ 2.2
TTC3-225ENST00000540756 VPS37CA5D8V6 355 aaPredicted RBP28.8■■■□□ 2.2
TTC3-225ENST00000540756 MCTP1Q6DN14 999 aa28.8■■■□□ 2.2
TTC3-225ENST00000540756 SLC44A5Q8NCS7 719 aa28.8■■■□□ 2.2
TTC3-225ENST00000540756 NMT2O60551 498 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 PICALMQ13492 652 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 HHIPL2Q6UWX4 724 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 CERS3Q8IU89 383 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 DDX4Q9NQI0 724 aaKnown RBP28.79■■■□□ 2.2
TTC3-225ENST00000540756 TCHHQ07283 1943 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 TNKSO95271 1327 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 ORC4O43929 436 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 POLR3DP05423 398 aaPredicted RBP28.79■■■□□ 2.2
TTC3-225ENST00000540756 WTAPQ15007 396 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 SEC23AQ15436 765 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 CDC42EP5Q6NZY7 148 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 CDC37L1Q7L3B6 337 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 UBAC1Q9BSL1 405 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 USP40Q9NVE5 1235 aa28.79■■■□□ 2.2
TTC3-225ENST00000540756 WDHD1O75717 1129 aaPredicted RBP28.78■■■□□ 2.2
TTC3-225ENST00000540756 RAD17O75943 681 aa28.78■■■□□ 2.2
TTC3-225ENST00000540756 CDC27P30260 824 aa28.78■■■□□ 2.2
TTC3-225ENST00000540756 ADD1P35611 737 aaKnown RBP28.78■■■□□ 2.2
TTC3-225ENST00000540756 FKBP1AP62942 108 aaKnown RBP28.78■■■□□ 2.2
TTC3-225ENST00000540756 FOSBP53539 338 aa28.77■■■□□ 2.2
TTC3-225ENST00000540756 ENAHQ8N8S7 591 aaPredicted RBP28.77■■■□□ 2.2
TTC3-225ENST00000540756 CCDC69A6NI79 296 aa28.77■■■□□ 2.2
TTC3-225ENST00000540756 SLC3A2P08195 630 aaKnown RBP28.77■■■□□ 2.2
TTC3-225ENST00000540756 PCP11498 1178 aaKnown RBP28.77■■■□□ 2.2
TTC3-225ENST00000540756 FDPSP14324 419 aaKnown RBP28.77■■■□□ 2.2
TTC3-225ENST00000540756 METAP2P50579 478 aaKnown RBP eCLIP28.77■■■□□ 2.2
TTC3-225ENST00000540756 PDE4BQ07343 736 aa28.77■■■□□ 2.2
TTC3-225ENST00000540756 SART3Q15020 963 aaKnown RBP28.77■■■□□ 2.2
TTC3-225ENST00000540756 ZSCAN10Q96SZ4 725 aaPredicted RBP28.77■■■□□ 2.2
TTC3-225ENST00000540756 SLC12A7Q9Y666 1083 aa28.77■■■□□ 2.2
TTC3-225ENST00000540756 ZBTB43O43298 467 aa28.76■■■□□ 2.19
TTC3-225ENST00000540756 F13A1P00488 732 aa28.76■■■□□ 2.19
TTC3-225ENST00000540756 NLGN2Q8NFZ4 835 aa28.76■■■□□ 2.19
TTC3-225ENST00000540756 FAM217BQ9NTX9 383 aaPredicted RBP28.76■■■□□ 2.19
TTC3-225ENST00000540756 CD2APQ9Y5K6 639 aa28.76■■■□□ 2.19
TTC3-225ENST00000540756 PSME4Q14997 1843 aa28.76■■■□□ 2.19
TTC3-225ENST00000540756 ERICH2A1L162 156 aa28.76■■■□□ 2.19
TTC3-225ENST00000540756 BCS1LQ9Y276 419 aa28.76■■■□□ 2.19
TTC3-225ENST00000540756 FER1L6Q2WGJ9 1857 aa28.75■■■□□ 2.19
TTC3-225ENST00000540756 DDX11L8A8MPP1 907 aa28.75■■■□□ 2.19
TTC3-225ENST00000540756 RBM5P52756 815 aaKnown RBP eCLIP28.75■■■□□ 2.198e-6■■□□□ 11.9
TTC3-225ENST00000540756 ZDHHC15Q96MV8 337 aa28.75■■■□□ 2.19
TTC3-225ENST00000540756 ROBO3Q96MS0 1386 aa28.75■■■□□ 2.19
TTC3-225ENST00000540756 CACNB3P54284 484 aa28.74■■■□□ 2.19
TTC3-225ENST00000540756 NFIAQ12857 509 aa28.74■■■□□ 2.19
TTC3-225ENST00000540756 FERMT3Q86UX7 667 aa28.74■■■□□ 2.19
TTC3-225ENST00000540756 FAM184AQ8NB25 1140 aa28.74■■■□□ 2.19
TTC3-225ENST00000540756 ECM29Q5VYK3 1845 aa28.74■■■□□ 2.19
TTC3-225ENST00000540756 PSMD14O00487 310 aa28.74■■■□□ 2.19
TTC3-225ENST00000540756 SOGA3Q5TF21 947 aa28.74■■■□□ 2.19
TTC3-225ENST00000540756 AMOTL1Q8IY63 956 aa28.74■■■□□ 2.19
TTC3-225ENST00000540756 PDCP20941 246 aa28.73■■■□□ 2.19
TTC3-225ENST00000540756 MTA3Q9BTC8 594 aa28.73■■■□□ 2.19
TTC3-225ENST00000540756 TSPY2A6NKD2 308 aa28.72■■■□□ 2.19
TTC3-225ENST00000540756 GOLGA8AA7E2F4 631 aa28.72■■■□□ 2.19
TTC3-225ENST00000540756 CPLX1O14810 134 aa28.72■■■□□ 2.19
TTC3-225ENST00000540756 IARSP41252 1262 aaKnown RBP28.72■■■□□ 2.19
TTC3-225ENST00000540756 IQCA1Q86XH1 822 aa28.72■■■□□ 2.19
TTC3-225ENST00000540756 ZBTB12Q9Y330 459 aaPredicted RBP28.72■■■□□ 2.19
TTC3-225ENST00000540756 NFKBIEO00221 500 aa28.72■■■□□ 2.19
TTC3-225ENST00000540756 HMGN5P82970 282 aaKnown RBP28.72■■■□□ 2.19
TTC3-225ENST00000540756 TFAP4Q01664 338 aa28.72■■■□□ 2.19
TTC3-225ENST00000540756 MKNK2Q9HBH9 465 aa28.72■■■□□ 2.19
TTC3-225ENST00000540756 ZFPM1Q8IX07 1006 aa28.71■■■□□ 2.19
TTC3-225ENST00000540756 ZNF654Q8IZM8 581 aa28.71■■■□□ 2.19
TTC3-225ENST00000540756 MRIQ9BWK5 157 aa28.71■■■□□ 2.19
TTC3-225ENST00000540756 TAOK3Q9H2K8 898 aa28.71■■■□□ 2.19
TTC3-225ENST00000540756 DHX16O60231 1041 aaKnown RBP28.7■■■□□ 2.19
TTC3-225ENST00000540756 GDPD2Q9HCC8 539 aa28.7■■■□□ 2.19
TTC3-225ENST00000540756 IL17RBQ9NRM6 502 aa28.7■■■□□ 2.19
TTC3-225ENST00000540756 CDK8P49336 464 aa28.7■■■□□ 2.18
TTC3-225ENST00000540756 NTRK3Q16288 839 aa28.7■■■□□ 2.18
TTC3-225ENST00000540756 IFIT1BQ5T764 474 aaKnown RBP28.7■■■□□ 2.18
TTC3-225ENST00000540756 RSBN1LQ6PCB5 846 aaPredicted RBP28.7■■■□□ 2.18
TTC3-225ENST00000540756 TMTC2Q8N394 836 aa28.7■■■□□ 2.18
TTC3-225ENST00000540756 NUP133Q8WUM0 1156 aa28.7■■■□□ 2.18
TTC3-225ENST00000540756 PHKBQ93100 1093 aa28.7■■■□□ 2.18
TTC3-225ENST00000540756 SERPINA10Q9UK55 444 aa28.7■■■□□ 2.18
TTC3-225ENST00000540756 UBE2Q2LH0YL09 131 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 TRAK2O60296 914 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 RASA1P20936 1047 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 FAM173BQ6P4H8 233 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 C16orf86Q6ZW13 317 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 ZNRF3Q9ULT6 936 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 PRPF40AO75400 957 aaKnown RBP28.69■■■□□ 2.18
TTC3-225ENST00000540756 VIL1P09327 827 aaKnown RBP28.69■■■□□ 2.18
TTC3-225ENST00000540756 SLURP2P0DP57 97 aa28.69■■■□□ 2.18
TTC3-225ENST00000540756 HDLBPQ00341 1268 aaKnown RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms