RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 HOOK2Q96ED9 719 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 IL17RAQ96F46 866 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 FAM227BQ96M60 508 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 LSG1Q9H089 658 aaKnown RBP12.68□□□□□ -0.38
ATL3-204ENST00000540699 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
ATL3-204ENST00000540699 OSBPL5Q9H0X9 879 aaPredicted RBP12.68□□□□□ -0.38
ATL3-204ENST00000540699 MYH8P13535 1937 aa12.67□□□□□ -0.38
ATL3-204ENST00000540699 MBD4O95243 580 aa12.67□□□□□ -0.38
ATL3-204ENST00000540699 TGFBRAP1Q8WUH2 860 aa12.67□□□□□ -0.38
ATL3-204ENST00000540699 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
ATL3-204ENST00000540699 STRBPQ96SI9 672 aaKnown RBP12.67□□□□□ -0.38
ATL3-204ENST00000540699 CRNKL1Q9BZJ0 848 aaKnown RBP12.67□□□□□ -0.38
ATL3-204ENST00000540699 ARMT1Q9H993 441 aa12.67□□□□□ -0.38
ATL3-204ENST00000540699 ATAD5Q96QE3 1844 aa12.67□□□□□ -0.38
ATL3-204ENST00000540699 DDTLA6NHG4 134 aaPredicted RBP12.66□□□□□ -0.38
ATL3-204ENST00000540699 UNCXA6NJT0 531 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 M0R2C6 588 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 SLC10A3P09131 477 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 ZNF157P51786 506 aaPredicted RBP12.66□□□□□ -0.38
ATL3-204ENST00000540699 PICALMQ13492 652 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 DGKZQ13574 1117 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 LDLRAD1Q5T700 205 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 METTL16Q86W50 562 aaKnown RBP12.66□□□□□ -0.38
ATL3-204ENST00000540699 MAPKAPK5Q8IW41 473 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 DDRGK1Q96HY6 314 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
ATL3-204ENST00000540699 ANO2Q9NQ90 1003 aa12.66□□□□□ -0.38
ATL3-204ENST00000540699 DOCK1Q14185 1865 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 GPAA1O43292 621 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
ATL3-204ENST00000540699 TBC1D12O60347 775 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 USP2O75604 605 aaPredicted RBP12.65□□□□□ -0.38
ATL3-204ENST00000540699 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
ATL3-204ENST00000540699 DCAF15Q66K64 600 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 CSRNP1Q96S65 589 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 HELLSQ9NRZ9 838 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 ATP8A2Q9NTI2 1148 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 SAGE1Q9NXZ1 904 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 ZNF112Q9UJU3 913 aa12.65□□□□□ -0.38
ATL3-204ENST00000540699 PHIPQ8WWQ0 1821 aa12.65□□□□□ -0.39
ATL3-204ENST00000540699 CCDC171Q6TFL3 1326 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 PRKAB2O43741 272 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 GNAT2P19087 354 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 USP5P45974 858 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 GIMAP6Q6P9H5 292 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 MOB2Q70IA6 237 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 ZNF589Q86UQ0 364 aaPredicted RBP12.64□□□□□ -0.39
ATL3-204ENST00000540699 RASAL3Q86YV0 1011 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.64□□□□□ -0.39
ATL3-204ENST00000540699 SDR42E1Q8WUS8 393 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 SEC62Q99442 399 aaKnown RBP12.64□□□□□ -0.39
ATL3-204ENST00000540699 DCP1AQ9NPI6 582 aaPredicted RBP12.64□□□□□ -0.39
ATL3-204ENST00000540699 PI4KBQ9UBF8 816 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 TAOK2Q9UL54 1235 aa12.64□□□□□ -0.39
ATL3-204ENST00000540699 LAMA4Q16363 1823 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 GSG1L2A8MUP6 293 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 UBE2Q2LH0YL09 131 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 HSPA4P34932 840 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 PTH1RQ03431 593 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 ZSCAN29Q8IWY8 852 aaPredicted RBP12.63□□□□□ -0.39
ATL3-204ENST00000540699 KCNB2Q92953 911 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 ZNF341Q9BYN7 854 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 EHD4Q9H223 541 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 HERC5Q9UII4 1024 aaKnown RBP12.63□□□□□ -0.39
ATL3-204ENST00000540699 PALD1Q9ULE6 856 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 ANGEL1Q9UNK9 670 aaKnown RBP12.63□□□□□ -0.39
ATL3-204ENST00000540699 FZD1Q9UP38 647 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 SLC4A4Q9Y6R1 1079 aa12.63□□□□□ -0.39
ATL3-204ENST00000540699 PHF20L1A8MW92 1017 aa12.62□□□□□ -0.39
ATL3-204ENST00000540699 FOXP2O15409 715 aa12.62□□□□□ -0.39
ATL3-204ENST00000540699 IREB2P48200 963 aaKnown RBP12.62□□□□□ -0.39
ATL3-204ENST00000540699 ANAPC15P60006 121 aa12.62□□□□□ -0.39
ATL3-204ENST00000540699 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.62□□□□□ -0.39
ATL3-204ENST00000540699 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
ATL3-204ENST00000540699 MAP4K1Q92918 833 aa12.62□□□□□ -0.39
ATL3-204ENST00000540699 EPB41L4AQ9HCS5 686 aaPredicted RBP12.62□□□□□ -0.39
ATL3-204ENST00000540699 RNF186Q9NXI6 227 aa12.62□□□□□ -0.39
ATL3-204ENST00000540699 SAP30BPQ9UHR5 308 aaKnown RBP12.62□□□□□ -0.39
ATL3-204ENST00000540699 PTPRFP10586 1907 aa12.62□□□□□ -0.39
ATL3-204ENST00000540699 PATL2C9JE40 543 aaKnown RBP12.61□□□□□ -0.39
ATL3-204ENST00000540699 TRPA1O75762 1119 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 MCCP23508 829 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 GABPAQ06546 454 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 PRKG1Q13976 671 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 TTLL12Q14166 644 aaPredicted RBP12.61□□□□□ -0.39
ATL3-204ENST00000540699 SBK1Q52WX2 424 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 NOL9Q5SY16 702 aaKnown RBP12.61□□□□□ -0.39
ATL3-204ENST00000540699 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 TTC6Q86TZ1 520 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 ANKRD13AQ8IZ07 590 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 DNAJC18Q9H819 358 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 MCM9Q9NXL9 1143 aa12.61□□□□□ -0.39
ATL3-204ENST00000540699 PDE4DIPQ5VU43 2346 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms