RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ZFYVE27Q5T4F4 411 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 ANKZF1Q9H8Y5 726 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 AATFQ9NY61 560 aaKnown RBP eCLIP12.39□□□□□ -0.43
PBX1-212ENST00000540236 DYTNA2CJ06 578 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 EIF3HO15372 352 aaKnown RBP eCLIP12.38□□□□□ -0.43
PBX1-212ENST00000540236 PSMC4P43686 418 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 VSTM4Q8IW00 320 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 CCDC13Q8IYE1 715 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 ANKRD13CQ8N6S4 541 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 STAMBPL1Q96FJ0 436 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 ALG1Q9BT22 464 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 ZHX3Q9H4I2 956 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 ECHDC1Q9NTX5 307 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 MCM8Q9UJA3 840 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 IQCB1Q15051 598 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 NR1D1P20393 614 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 GPTP24298 496 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 KIF5AQ12840 1032 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 CCDC38Q502W7 563 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 TRIM58Q8NG06 486 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 PPFIA2O75334 1257 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 DYDC2Q96IM9 177 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 ZNF711Q9Y462 761 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 ERICH2A1L162 156 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 EVI5O60447 810 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 OPHN1O60890 802 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 TACC1O75410 805 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 OLFML2BQ68BL8 750 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 KIF2BQ8N4N8 673 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 NSRP1Q9H0G5 558 aaKnown RBP12.38□□□□□ -0.43
PBX1-212ENST00000540236 RMI1Q9H9A7 625 aa12.38□□□□□ -0.43
PBX1-212ENST00000540236 FOXO3O43524 673 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 ZNF131P52739 623 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 SPTY2D1Q68D10 685 aaPredicted RBP12.37□□□□□ -0.43
PBX1-212ENST00000540236 SARM1Q6SZW1 724 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 ADAT2Q7Z6V5 191 aaKnown RBP12.37□□□□□ -0.43
PBX1-212ENST00000540236 NAA15Q9BXJ9 866 aaKnown RBP12.37□□□□□ -0.43
PBX1-212ENST00000540236 NFU1Q9UMS0 254 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 AKR1B10O60218 316 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 CRYMQ14894 314 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 LONP2Q86WA8 852 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 SYNRGQ9UMZ2 1314 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 SERTAD1Q9UHV2 236 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 CTTNBP2Q8WZ74 1663 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 TXNDC9O14530 226 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 CTCFP49711 727 aaPredicted RBP12.37□□□□□ -0.43
PBX1-212ENST00000540236 ACCSLQ4AC99 568 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 CYB5D1Q6P9G0 228 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 NME9Q86XW9 330 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 TBC1D22AQ8WUA7 517 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 TRIM47Q96LD4 638 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 PPARAQ07869 468 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 KLHDC4Q8TBB5 520 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 TMX4Q9H1E5 349 aaPredicted RBP12.37□□□□□ -0.43
PBX1-212ENST00000540236 VCXQ9H320 206 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 EPB41L5Q9HCM4 733 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 SWAP70Q9UH65 585 aa12.37□□□□□ -0.43
PBX1-212ENST00000540236 SBNO2Q9Y2G9 1366 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 KRT9P35527 623 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 RFX8Q6ZV50 586 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 CCDC47Q96A33 483 aaKnown RBP12.36□□□□□ -0.43
PBX1-212ENST00000540236 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
PBX1-212ENST00000540236 ZNF189O75820 626 aaPredicted RBP12.36□□□□□ -0.43
PBX1-212ENST00000540236 KRT12Q99456 494 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 CHCHD3Q9NX63 227 aaKnown RBP12.36□□□□□ -0.43
PBX1-212ENST00000540236 GKAP1Q5VSY0 366 aaPredicted RBP12.36□□□□□ -0.43
PBX1-212ENST00000540236 ZNF365Q70YC5 407 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 NESP48681 1621 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 PHF20L1A8MW92 1017 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 KRT13P13646 458 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 POLD1P28340 1107 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 ANO1Q5XXA6 986 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 B4GALNT2Q8NHY0 566 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 RNPC3Q96LT9 517 aaKnown RBP12.36□□□□□ -0.43
PBX1-212ENST00000540236 DPH5Q9H2P9 285 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 L3MBTL1Q9Y468 752 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 SNAPC4Q5SXM2 1469 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 MOCS3O95396 460 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 ATP1A1P05023 1023 aaKnown RBP12.36□□□□□ -0.43
PBX1-212ENST00000540236 TMOD1P28289 359 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 IFT20Q8IY31 132 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 MMS19Q96T76 1030 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 L2HGDHQ9H9P8 463 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 KCNH3Q9ULD8 1083 aa12.36□□□□□ -0.43
PBX1-212ENST00000540236 IL16Q14005 1332 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 TRAF1Q13077 416 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 HHATQ5VTY9 493 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 NOVA2Q9UNW9 492 aaKnown RBP12.35□□□□□ -0.43
PBX1-212ENST00000540236 CYLC1P35663 651 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms