RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 ANKRD44Q8N8A2 993 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 C7orf43Q8WVR3 580 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 JDP2Q8WYK2 163 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 TSC1Q92574 1164 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 KAZALD1Q96I82 304 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 CCDC85AQ96PX6 553 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-204ENST00000540083 ZC3H12CQ9C0D7 883 aaKnown RBP8.93□□□□□ -0.98
NECAP1-204ENST00000540083 UNC93B1Q9H1C4 597 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 COPRSQ9NQ92 184 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 SEC31BQ9NQW1 1179 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 CEP126Q9P2H0 1117 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 NSFL1CQ9UNZ2 370 aaKnown RBP8.93□□□□□ -0.98
NECAP1-204ENST00000540083 AKAP2Q9Y2D5 859 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 ZC3H4Q9UPT8 1303 aaKnown RBP8.93□□□□□ -0.98
NECAP1-204ENST00000540083 ARFGEF1Q9Y6D6 1849 aa8.93□□□□□ -0.98
NECAP1-204ENST00000540083 EYA2O00167 538 aa8.92□□□□□ -0.98
NECAP1-204ENST00000540083 LMNB1P20700 586 aa8.92□□□□□ -0.98
NECAP1-204ENST00000540083 OS9Q13438 667 aaPredicted RBP8.92□□□□□ -0.98
NECAP1-204ENST00000540083 METTL24Q5JXM2 366 aa8.92□□□□□ -0.98
NECAP1-204ENST00000540083 EPHA10Q5JZY3 1008 aa8.92□□□□□ -0.98
NECAP1-204ENST00000540083 SSH3Q8TE77 659 aa8.92□□□□□ -0.98
NECAP1-204ENST00000540083 SECISBP2LQ93073 1101 aaKnown RBP8.92□□□□□ -0.98
NECAP1-204ENST00000540083 MRGPRX2Q96LB1 330 aa8.92□□□□□ -0.98
NECAP1-204ENST00000540083 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.92□□□□□ -0.98
NECAP1-204ENST00000540083 RTFDC1Q9BY42 306 aaPredicted RBP8.92□□□□□ -0.98
NECAP1-204ENST00000540083 PRDM10Q9NQV6 1147 aa8.92□□□□□ -0.98
NECAP1-204ENST00000540083 MINPP1Q9UNW1 487 aa8.92□□□□□ -0.98
NECAP1-204ENST00000540083 TNNQ9UQP3 1299 aa8.92□□□□□ -0.98
NECAP1-204ENST00000540083 BRCA1P38398 1863 aaKnown RBP8.91□□□□□ -0.98
NECAP1-204ENST00000540083 TNRC6CQ9HCJ0 1690 aaKnown RBP8.91□□□□□ -0.98
NECAP1-204ENST00000540083 FAM187AA6NFU0 413 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 RAB11FIP3O75154 756 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 F12P00748 615 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-204ENST00000540083 IFIT1P09914 478 aaKnown RBP8.91□□□□□ -0.98
NECAP1-204ENST00000540083 CTHP32929 405 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 PTPN12Q05209 780 aaKnown RBP8.91□□□□□ -0.98
NECAP1-204ENST00000540083 CHRNDQ07001 517 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 UBE4AQ14139 1066 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 WASHC4Q2M389 1173 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 CEP85Q6P2H3 762 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 HELBQ8NG08 1087 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-204ENST00000540083 ANKRD7Q92527 254 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 GOPCQ9HD26 462 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 DIAPH3Q9NSV4 1193 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 COL11A2P13942 1736 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-204ENST00000540083 KIAA1551Q9HCM1 1747 aa8.91□□□□□ -0.98
NECAP1-204ENST00000540083 SLX4Q8IY92 1834 aa8.9□□□□□ -0.98
NECAP1-204ENST00000540083 SURF6O75683 361 aaKnown RBP8.9□□□□□ -0.98
NECAP1-204ENST00000540083 UFL1O94874 794 aa8.9□□□□□ -0.98
NECAP1-204ENST00000540083 PDE8BO95263 885 aa8.9□□□□□ -0.98
NECAP1-204ENST00000540083 YBX3P16989 372 aaKnown RBP eCLIP8.9□□□□□ -0.98
NECAP1-204ENST00000540083 IARSP41252 1262 aaKnown RBP8.9□□□□□ -0.98
NECAP1-204ENST00000540083 CAVIN4Q5BKX8 364 aa8.9□□□□□ -0.98
NECAP1-204ENST00000540083 C20orf194Q5TEA3 1177 aa8.9□□□□□ -0.98
NECAP1-204ENST00000540083 GAS2L3Q86XJ1 694 aa8.9□□□□□ -0.98
NECAP1-204ENST00000540083 SNIP1Q8TAD8 396 aaKnown RBP8.9□□□□□ -0.98
NECAP1-204ENST00000540083 BAP1Q92560 729 aa8.9□□□□□ -0.98
NECAP1-204ENST00000540083 GZF1Q9H116 711 aaPredicted RBP8.9□□□□□ -0.98
NECAP1-204ENST00000540083 RWDD1Q9H446 243 aaPredicted RBP8.9□□□□□ -0.98
NECAP1-204ENST00000540083 CGNQ9P2M7 1197 aaKnown RBP8.9□□□□□ -0.98
NECAP1-204ENST00000540083 RIPOR2Q9Y4F9 1068 aa8.9□□□□□ -0.98
NECAP1-204ENST00000540083 SRCAPQ6ZRS2 3230 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 ZNF804BA4D1E1 1349 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
NECAP1-204ENST00000540083 PPIP5K2O43314 1243 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 SLC5A1P13866 664 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 RFX5P48382 616 aaPredicted RBP8.89□□□□□ -0.99
NECAP1-204ENST00000540083 EIF6P56537 245 aaKnown RBP8.89□□□□□ -0.99
NECAP1-204ENST00000540083 SH3BP2P78314 561 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 PUM3Q15397 648 aaKnown RBP8.89□□□□□ -0.99
NECAP1-204ENST00000540083 PPP2R2DQ66LE6 453 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 C15orf52Q6ZUT6 534 aaKnown RBP8.89□□□□□ -0.99
NECAP1-204ENST00000540083 ZNF804AQ7Z570 1209 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 VPS37DQ86XT2 251 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 NIM1KQ8IY84 436 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 LARGE2Q8N3Y3 721 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 TBC1D16Q8TBP0 767 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 PIBF1Q8WXW3 757 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 LPIN2Q92539 896 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 GCC1Q96CN9 775 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 KIF1BPQ96EK5 621 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 BRMS1Q9HCU9 246 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 GPR108Q9NPR9 543 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 SPTLC3Q9NUV7 552 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 GNL3LQ9NVN8 582 aaKnown RBP8.89□□□□□ -0.99
NECAP1-204ENST00000540083 MAP10Q9P2G4 905 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 WWC3Q9ULE0 1092 aa8.89□□□□□ -0.99
NECAP1-204ENST00000540083 MED23Q9ULK4 1368 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 PNMA6EA0A0J9YXQ4 647 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 TPM3P06753 285 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 GPSM2P81274 684 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 TNIP1Q15025 636 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 ZNF771Q7L3S4 317 aaPredicted RBP8.88□□□□□ -0.99
NECAP1-204ENST00000540083 PODNQ7Z5L7 613 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 ZNF594Q96JF6 807 aaPredicted RBP8.88□□□□□ -0.99
NECAP1-204ENST00000540083 COA1Q9GZY4 146 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 SIL1Q9H173 461 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 C1orf115Q9H7X2 142 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 RNF181Q9P0P0 153 aa8.88□□□□□ -0.99
NECAP1-204ENST00000540083 CACNA1SQ13698 1873 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms