RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 RNF214Q8ND24 703 aa10.3□□□□□ -0.76
TRAV11-201ENST00000539512 ZNF507Q8TCN5 953 aa10.3□□□□□ -0.76
TRAV11-201ENST00000539512 UTP4Q969X6 686 aaKnown RBP10.3□□□□□ -0.76
TRAV11-201ENST00000539512 RXRBP28702 533 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 PREPP48147 710 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 TTLL4Q14679 1199 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 UVSSAQ2YD98 709 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 C2CD4AQ8NCU7 369 aaPredicted RBP10.29□□□□□ -0.76
TRAV11-201ENST00000539512 DCAF5Q96JK2 942 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 GMLQ99445 158 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 WNT10AQ9GZT5 417 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 DISC1Q9NRI5 854 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 PPT2Q9UMR5 302 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 ACTL7BQ9Y614 415 aa10.29□□□□□ -0.76
TRAV11-201ENST00000539512 HTR3BO95264 441 aa10.28□□□□□ -0.76
TRAV11-201ENST00000539512 HCLS1P14317 486 aaPredicted RBP10.28□□□□□ -0.76
TRAV11-201ENST00000539512 ZBTB37Q5TC79 503 aa10.28□□□□□ -0.76
TRAV11-201ENST00000539512 Q6ZS46 218 aa10.28□□□□□ -0.76
TRAV11-201ENST00000539512 SRRTQ9BXP5 876 aaKnown RBP10.28□□□□□ -0.76
TRAV11-201ENST00000539512 POLR3KQ9Y2Y1 108 aaPredicted RBP10.28□□□□□ -0.76
TRAV11-201ENST00000539512 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.27□□□□□ -0.77
TRAV11-201ENST00000539512 GTF2F1P35269 517 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRAV11-201ENST00000539512 EIF6P56537 245 aaKnown RBP10.27□□□□□ -0.77
TRAV11-201ENST00000539512 LRRFIP1Q32MZ4 808 aaKnown RBP10.27□□□□□ -0.77
TRAV11-201ENST00000539512 CCDC81Q6ZN84 652 aa10.27□□□□□ -0.77
TRAV11-201ENST00000539512 SMYD4Q8IYR2 804 aaPredicted RBP10.27□□□□□ -0.77
TRAV11-201ENST00000539512 KCNF1Q9H3M0 494 aa10.27□□□□□ -0.77
TRAV11-201ENST00000539512 CORINQ9Y5Q5 1042 aa10.27□□□□□ -0.77
TRAV11-201ENST00000539512 KRBA1A5PL33 1030 aa10.26□□□□□ -0.77
TRAV11-201ENST00000539512 STK10O94804 968 aaKnown RBP10.26□□□□□ -0.77
TRAV11-201ENST00000539512 CLCQ05315 142 aa10.26□□□□□ -0.77
TRAV11-201ENST00000539512 HID1Q8IV36 788 aa10.26□□□□□ -0.77
TRAV11-201ENST00000539512 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
TRAV11-201ENST00000539512 ANAPC16Q96DE5 110 aa10.26□□□□□ -0.77
TRAV11-201ENST00000539512 EHMT1Q9H9B1 1298 aa10.26□□□□□ -0.77
TRAV11-201ENST00000539512 FAM105AQ9NUU6 356 aa10.26□□□□□ -0.77
TRAV11-201ENST00000539512 REV1Q9UBZ9 1251 aa10.26□□□□□ -0.77
TRAV11-201ENST00000539512 ADAM30Q9UKF2 790 aa10.26□□□□□ -0.77
TRAV11-201ENST00000539512 R3HCC1Q9Y3T6 440 aaKnown RBP10.26□□□□□ -0.77
TRAV11-201ENST00000539512 DAGLAQ9Y4D2 1042 aa10.26□□□□□ -0.77
TRAV11-201ENST00000539512 C1QTNF9BB2RNN3 333 aa10.25□□□□□ -0.77
TRAV11-201ENST00000539512 DHX15O43143 795 aaKnown RBP10.25□□□□□ -0.77
TRAV11-201ENST00000539512 FGRP09769 529 aa10.25□□□□□ -0.77
TRAV11-201ENST00000539512 CHRNA4P43681 627 aa10.25□□□□□ -0.77
TRAV11-201ENST00000539512 YARSP54577 528 aaKnown RBP10.25□□□□□ -0.77
TRAV11-201ENST00000539512 MAP7Q14244 749 aa10.25□□□□□ -0.77
TRAV11-201ENST00000539512 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.25□□□□□ -0.77
TRAV11-201ENST00000539512 CD163Q86VB7 1156 aa10.25□□□□□ -0.77
TRAV11-201ENST00000539512 MCF2L2Q86YR7 1114 aa10.25□□□□□ -0.77
TRAV11-201ENST00000539512 UBL7Q96S82 380 aaPredicted RBP10.25□□□□□ -0.77
TRAV11-201ENST00000539512 KLHL3Q9UH77 587 aa10.25□□□□□ -0.77
TRAV11-201ENST00000539512 ZNRF3Q9ULT6 936 aa10.25□□□□□ -0.77
TRAV11-201ENST00000539512 ATE1O95260 518 aa10.24□□□□□ -0.77
TRAV11-201ENST00000539512 BMP3P12645 472 aa10.24□□□□□ -0.77
TRAV11-201ENST00000539512 GATA4P43694 442 aa10.24□□□□□ -0.77
TRAV11-201ENST00000539512 CHMP4BP1P59074 171 aa10.24□□□□□ -0.77
TRAV11-201ENST00000539512 RASSF7Q02833 373 aa10.24□□□□□ -0.77
TRAV11-201ENST00000539512 OR6P1Q8NGX9 317 aa10.24□□□□□ -0.77
TRAV11-201ENST00000539512 UBXN4Q92575 508 aa10.24□□□□□ -0.77
TRAV11-201ENST00000539512 FAM46AQ96IP4 442 aaKnown RBP10.24□□□□□ -0.77
TRAV11-201ENST00000539512 MYRFLQ96LU7 910 aa10.24□□□□□ -0.77
TRAV11-201ENST00000539512 PCOLCE2Q9UKZ9 415 aa10.24□□□□□ -0.77
TRAV11-201ENST00000539512 RING1Q06587 406 aa10.23□□□□□ -0.77
TRAV11-201ENST00000539512 DZIP1LQ8IYY4 767 aaKnown RBP10.23□□□□□ -0.77
TRAV11-201ENST00000539512 FAM13CQ8NE31 585 aa10.23□□□□□ -0.77
TRAV11-201ENST00000539512 ISL2Q96A47 359 aa10.23□□□□□ -0.77
TRAV11-201ENST00000539512 MEGF10Q96KG7 1140 aa10.23□□□□□ -0.77
TRAV11-201ENST00000539512 GSX1Q9H4S2 264 aaPredicted RBP10.23□□□□□ -0.77
TRAV11-201ENST00000539512 GMIPQ9P107 970 aa10.23□□□□□ -0.77
TRAV11-201ENST00000539512 PRR36Q9H6K5 1346 aa10.23□□□□□ -0.77
TRAV11-201ENST00000539512 MAP4P27816 1152 aaKnown RBP10.22□□□□□ -0.77
TRAV11-201ENST00000539512 KCNMA1Q12791 1236 aa10.22□□□□□ -0.77
TRAV11-201ENST00000539512 SGO2Q562F6 1265 aa10.22□□□□□ -0.77
TRAV11-201ENST00000539512 PAOXQ6QHF9 649 aa10.22□□□□□ -0.77
TRAV11-201ENST00000539512 FBLIM1Q8WUP2 373 aa10.22□□□□□ -0.77
TRAV11-201ENST00000539512 ARMC5Q96C12 935 aa10.22□□□□□ -0.77
TRAV11-201ENST00000539512 HIRIP3Q9BW71 556 aaPredicted RBP10.22□□□□□ -0.77
TRAV11-201ENST00000539512 MRVI1Q9Y6F6 885 aa10.22□□□□□ -0.77
TRAV11-201ENST00000539512 FAM95CA0A1B0GW59 222 aa10.21□□□□□ -0.77
TRAV11-201ENST00000539512 GDF11O95390 407 aa10.21□□□□□ -0.77
TRAV11-201ENST00000539512 NEFMP07197 916 aa10.21□□□□□ -0.77
TRAV11-201ENST00000539512 TMEM201Q5SNT2 666 aa10.21□□□□□ -0.77
TRAV11-201ENST00000539512 FAM20CQ8IXL6 584 aa10.21□□□□□ -0.77
TRAV11-201ENST00000539512 CKAP2LQ8IYA6 745 aa10.21□□□□□ -0.77
TRAV11-201ENST00000539512 TMEM151AQ8N4L1 468 aa10.21□□□□□ -0.77
TRAV11-201ENST00000539512 DHX38Q92620 1227 aaKnown RBP10.21□□□□□ -0.77
TRAV11-201ENST00000539512 ACSS3Q9H6R3 686 aa10.21□□□□□ -0.77
TRAV11-201ENST00000539512 NFICP08651 508 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 RAG1P15918 1043 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 NFKBIBQ15653 356 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 TNNI3KQ59H18 835 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 SLC6A19Q695T7 634 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 CDPF1Q6NVV7 123 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 TMEM40Q8WWA1 233 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 TP53INP1Q96A56 240 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 TMEM87BQ96K49 555 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 LGR6Q9HBX8 967 aa10.2□□□□□ -0.78
TRAV11-201ENST00000539512 PHACTR4Q8IZ21 702 aa10.19□□□□□ -0.78
TRAV11-201ENST00000539512 GIMAP7Q8NHV1 300 aa10.19□□□□□ -0.78
TRAV11-201ENST00000539512 GIPRP48546 466 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms