RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ARHGEF6Q15052 776 aa23.25■■□□□ 1.31
TNFRSF1A-212ENST00000539372 GADL1Q6ZQY3 521 aa23.25■■□□□ 1.31
TNFRSF1A-212ENST00000539372 PRRT2Q7Z6L0 340 aaPredicted RBP23.25■■□□□ 1.31
TNFRSF1A-212ENST00000539372 CLASRPQ8N2M8 674 aaKnown RBP23.25■■□□□ 1.31
TNFRSF1A-212ENST00000539372 MIGA1Q8NAN2 632 aa23.25■■□□□ 1.31
TNFRSF1A-212ENST00000539372 FLT1P17948 1338 aa23.25■■□□□ 1.31
TNFRSF1A-212ENST00000539372 CYP2C8P10632 490 aa23.24■■□□□ 1.31
TNFRSF1A-212ENST00000539372 PDE3AQ14432 1141 aa23.24■■□□□ 1.31
TNFRSF1A-212ENST00000539372 RRP1BQ14684 758 aaKnown RBP23.24■■□□□ 1.31
TNFRSF1A-212ENST00000539372 KIF22Q14807 665 aa23.24■■□□□ 1.31
TNFRSF1A-212ENST00000539372 C17orf99Q6UX52 265 aa23.24■■□□□ 1.31
TNFRSF1A-212ENST00000539372 PI4KBQ9UBF8 816 aa23.24■■□□□ 1.31
TNFRSF1A-212ENST00000539372 SAP30BPQ9UHR5 308 aaKnown RBP23.24■■□□□ 1.31
TNFRSF1A-212ENST00000539372 HTTP42858 3142 aa23.24■■□□□ 1.31
TNFRSF1A-212ENST00000539372 IGSF3O75054 1194 aa23.23■■□□□ 1.31
TNFRSF1A-212ENST00000539372 IFIT2P09913 472 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1A-212ENST00000539372 FASTKD5Q7L8L6 764 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1A-212ENST00000539372 PARK7Q99497 189 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1A-212ENST00000539372 DHX36Q9H2U1 1008 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1A-212ENST00000539372 PALD1Q9ULE6 856 aa23.23■■□□□ 1.31
TNFRSF1A-212ENST00000539372 ADGRA2Q96PE1 1338 aa23.23■■□□□ 1.31
TNFRSF1A-212ENST00000539372 ZSWIM8A7E2V4 1837 aa23.22■■□□□ 1.31
TNFRSF1A-212ENST00000539372 RAB11FIP3O75154 756 aa23.22■■□□□ 1.31
TNFRSF1A-212ENST00000539372 MAP3K12Q12852 859 aa23.22■■□□□ 1.31
TNFRSF1A-212ENST00000539372 SLC4A8Q2Y0W8 1093 aa23.22■■□□□ 1.31
TNFRSF1A-212ENST00000539372 HERC5Q9UII4 1024 aaKnown RBP23.22■■□□□ 1.31
TNFRSF1A-212ENST00000539372 PTCH2Q9Y6C5 1203 aa23.22■■□□□ 1.31
TNFRSF1A-212ENST00000539372 CAP2P40123 477 aa23.21■■□□□ 1.31
TNFRSF1A-212ENST00000539372 PHIPQ8WWQ0 1821 aa23.21■■□□□ 1.31
TNFRSF1A-212ENST00000539372 CDK5RAP2Q96SN8 1893 aa23.2■■□□□ 1.3
TNFRSF1A-212ENST00000539372 CTGFP29279 349 aa23.2■■□□□ 1.3
TNFRSF1A-212ENST00000539372 DNAJC2Q99543 621 aaKnown RBP23.2■■□□□ 1.3
TNFRSF1A-212ENST00000539372 DNAJC18Q9H819 358 aa23.2■■□□□ 1.3
TNFRSF1A-212ENST00000539372 SIPA1L1O43166 1804 aa23.19■■□□□ 1.3
TNFRSF1A-212ENST00000539372 USP5P45974 858 aa23.19■■□□□ 1.3
TNFRSF1A-212ENST00000539372 SPP2Q13103 211 aa23.19■■□□□ 1.3
TNFRSF1A-212ENST00000539372 CRACR2BQ8N4Y2 399 aaPredicted RBP23.19■■□□□ 1.3
TNFRSF1A-212ENST00000539372 ARMC5Q96C12 935 aa23.19■■□□□ 1.3
TNFRSF1A-212ENST00000539372 TRIM34Q9BYJ4 488 aa23.19■■□□□ 1.3
TNFRSF1A-212ENST00000539372 FOCADQ5VW36 1801 aa23.18■■□□□ 1.3
TNFRSF1A-212ENST00000539372 GOLIM4O00461 696 aa23.18■■□□□ 1.3
TNFRSF1A-212ENST00000539372 PSMC4P43686 418 aa23.18■■□□□ 1.3
TNFRSF1A-212ENST00000539372 TTF1Q15361 905 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF1A-212ENST00000539372 SLC9C1Q4G0N8 1177 aa23.18■■□□□ 1.3
TNFRSF1A-212ENST00000539372 ZNF280CQ8ND82 737 aa23.18■■□□□ 1.3
TNFRSF1A-212ENST00000539372 POTEFA5A3E0 1075 aa23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 USP17L5A8MUK1 530 aa23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 SHROOM1Q2M3G4 852 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 TREML2Q5T2D2 321 aa23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 FOXP4Q8IVH2 680 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 EDC3Q96F86 508 aaKnown RBP23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 TRIM47Q96LD4 638 aa23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 AGTPBP1Q9UPW5 1226 aa23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 SLC45A1Q9Y2W3 748 aa23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 PTPRFP10586 1907 aa23.17■■□□□ 1.3
TNFRSF1A-212ENST00000539372 FMNL1O95466 1100 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 HLA-DOAP06340 250 aa23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 BCRP11274 1271 aa23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 PDE6AP16499 860 aa23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 HMGCS2P54868 508 aa23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 JAG1P78504 1218 aa23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 SLC9C2Q5TAH2 1124 aa23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 METTL16Q86W50 562 aaKnown RBP23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 CERS3Q8IU89 383 aa23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 ATAD5Q96QE3 1844 aa23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 CENPFP49454 3210 aa23.16■■□□□ 1.3
TNFRSF1A-212ENST00000539372 SMARCA5O60264 1052 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1A-212ENST00000539372 GDF11O95390 407 aa23.15■■□□□ 1.3
TNFRSF1A-212ENST00000539372 MYCP01106 439 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1A-212ENST00000539372 GNRH1P01148 92 aa23.15■■□□□ 1.3
TNFRSF1A-212ENST00000539372 SMCR8Q8TEV9 937 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1A-212ENST00000539372 ZNF333Q96JL9 665 aa23.15■■□□□ 1.3
TNFRSF1A-212ENST00000539372 RIOK1Q9BRS2 568 aaKnown RBP23.15■■□□□ 1.3
TNFRSF1A-212ENST00000539372 TBC1D2Q9BYX2 928 aa23.15■■□□□ 1.3
TNFRSF1A-212ENST00000539372 BOLA2Q9H3K6 86 aa23.15■■□□□ 1.3
TNFRSF1A-212ENST00000539372 MAGEB6P1A0A0J9YX57 407 aa23.14■■□□□ 1.29
TNFRSF1A-212ENST00000539372 OSBPP22059 807 aa23.14■■□□□ 1.29
TNFRSF1A-212ENST00000539372 TMED8Q6PL24 325 aaPredicted RBP23.14■■□□□ 1.29
TNFRSF1A-212ENST00000539372 NBPF11Q86T75 865 aa23.14■■□□□ 1.29
TNFRSF1A-212ENST00000539372 SH3TC2Q8TF17 1288 aa23.14■■□□□ 1.29
TNFRSF1A-212ENST00000539372 AS3MTQ9HBK9 375 aa23.14■■□□□ 1.29
TNFRSF1A-212ENST00000539372 TNRC18O15417 2968 aaPredicted RBP23.14■■□□□ 1.29
TNFRSF1A-212ENST00000539372 ZNF532Q9HCE3 1301 aa23.13■■□□□ 1.29
TNFRSF1A-212ENST00000539372 ASNSP08243 561 aa23.13■■□□□ 1.29
TNFRSF1A-212ENST00000539372 PROCA1Q8NCQ7 364 aaPredicted RBP23.13■■□□□ 1.29
TNFRSF1A-212ENST00000539372 LRRCC1Q9C099 1032 aa23.13■■□□□ 1.29
TNFRSF1A-212ENST00000539372 SRRDQ9UH36 339 aa23.13■■□□□ 1.29
TNFRSF1A-212ENST00000539372 HOXD10P28358 340 aa23.12■■□□□ 1.29
TNFRSF1A-212ENST00000539372 PRMT2P55345 433 aa23.12■■□□□ 1.29
TNFRSF1A-212ENST00000539372 FCGRTP55899 365 aa23.12■■□□□ 1.29
TNFRSF1A-212ENST00000539372 MTMR2Q13614 643 aa23.12■■□□□ 1.29
TNFRSF1A-212ENST00000539372 PAG1Q9NWQ8 432 aa23.12■■□□□ 1.29
TNFRSF1A-212ENST00000539372 MYPNQ86TC9 1320 aa23.11■■□□□ 1.29
TNFRSF1A-212ENST00000539372 ATP5JP18859 108 aa23.11■■□□□ 1.29
TNFRSF1A-212ENST00000539372 SLFNL1Q499Z3 407 aa23.11■■□□□ 1.29
TNFRSF1A-212ENST00000539372 ANKRD13CQ8N6S4 541 aa23.11■■□□□ 1.29
TNFRSF1A-212ENST00000539372 WDR18Q9BV38 432 aa23.11■■□□□ 1.29
TNFRSF1A-212ENST00000539372 TMEM106CQ9BVX2 250 aa23.11■■□□□ 1.29
TNFRSF1A-212ENST00000539372 PNMA3Q9UL41 463 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms