RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 MKNK2Q9HBH9 465 aa18.17■□□□□ 0.5
VAMP1-207ENST00000539047 SH2B1Q9NRF2 756 aaPredicted RBP18.17■□□□□ 0.5
VAMP1-207ENST00000539047 CNOT7Q9UIV1 285 aaKnown RBP18.17■□□□□ 0.5
VAMP1-207ENST00000539047 LIMCH1Q9UPQ0 1083 aa18.17■□□□□ 0.5
VAMP1-207ENST00000539047 CYP2D7A0A087X1C5 515 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 ORC4O43929 436 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 KDM4AO75164 1064 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 CYP2D6P10635 497 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 KIF4BQ2VIQ3 1234 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 FKBP1CQ5VVH2 108 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 Q6ZUG5 572 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 IQCA1Q86XH1 822 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 STK11IPQ8N1F8 1099 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 PRMT6Q96LA8 375 aaPredicted RBP18.16■□□□□ 0.5
VAMP1-207ENST00000539047 MTA3Q9BTC8 594 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 VEZTQ9HBM0 779 aa18.16■□□□□ 0.5
VAMP1-207ENST00000539047 ZNF70Q9UC06 446 aaPredicted RBP18.16■□□□□ 0.5
VAMP1-207ENST00000539047 CLRN2A0PK11 232 aa18.15■□□□□ 0.5
VAMP1-207ENST00000539047 RANBP6O60518 1105 aaKnown RBP18.15■□□□□ 0.5
VAMP1-207ENST00000539047 CRACR2BQ8N4Y2 399 aaPredicted RBP18.15■□□□□ 0.5
VAMP1-207ENST00000539047 DDX4Q9NQI0 724 aaKnown RBP18.15■□□□□ 0.5
VAMP1-207ENST00000539047 GPRC5DQ9NZD1 345 aa18.15■□□□□ 0.5
VAMP1-207ENST00000539047 SWAP70Q9UH65 585 aa18.15■□□□□ 0.5
VAMP1-207ENST00000539047 TSPY2A6NKD2 308 aa18.14■□□□□ 0.49
VAMP1-207ENST00000539047 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.49
VAMP1-207ENST00000539047 CACNB3P54284 484 aa18.14■□□□□ 0.49
VAMP1-207ENST00000539047 EXOSC10Q01780 885 aaKnown RBP18.14■□□□□ 0.49
VAMP1-207ENST00000539047 TCP10Q12799 353 aa18.14■□□□□ 0.49
VAMP1-207ENST00000539047 CCDC178Q5BJE1 867 aa18.14■□□□□ 0.49
VAMP1-207ENST00000539047 RBM26Q5T8P6 1007 aaKnown RBP18.14■□□□□ 0.49
VAMP1-207ENST00000539047 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.49
VAMP1-207ENST00000539047 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.49
VAMP1-207ENST00000539047 SERPINB13Q9UIV8 391 aa18.14■□□□□ 0.49
VAMP1-207ENST00000539047 PCDHAC2Q9Y5I4 1007 aa18.14■□□□□ 0.49
VAMP1-207ENST00000539047 CEP350Q5VT06 3117 aa18.14■□□□□ 0.49
VAMP1-207ENST00000539047 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 WNT10BO00744 389 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 NFIAQ12857 509 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 TMEM67Q5HYA8 995 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 C16orf86Q6ZW13 317 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 BRF1Q92994 677 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 EHD4Q9H223 541 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 GPBP1L1Q9HC44 474 aaPredicted RBP18.13■□□□□ 0.49
VAMP1-207ENST00000539047 PI4KBQ9UBF8 816 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 NAP1L2Q9ULW6 460 aaPredicted RBP18.13■□□□□ 0.49
VAMP1-207ENST00000539047 ANGEL1Q9UNK9 670 aaKnown RBP18.13■□□□□ 0.49
VAMP1-207ENST00000539047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.13■□□□□ 0.49
VAMP1-207ENST00000539047 SCN4AP35499 1836 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 ATRNL1Q5VV63 1379 aa18.13■□□□□ 0.49
VAMP1-207ENST00000539047 SIPA1L1O43166 1804 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
VAMP1-207ENST00000539047 FGRP09769 529 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 TBC1D10BQ4KMP7 808 aaPredicted RBP18.12■□□□□ 0.49
VAMP1-207ENST00000539047 SYNE3Q6ZMZ3 975 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 NFXL1Q6ZNB6 911 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 FAM83AQ86UY5 434 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 TMTC2Q8N394 836 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 FBXL16Q8N461 479 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 ZBED3Q96IU2 234 aaPredicted RBP18.12■□□□□ 0.49
VAMP1-207ENST00000539047 TMX3Q96JJ7 454 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 FAM198AQ9UFP1 575 aa18.12■□□□□ 0.49
VAMP1-207ENST00000539047 CCDC69A6NI79 296 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 PRDM1O75626 825 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 TSPY3P0CV98 308 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 TSPY8P0CW00 308 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 PLCD1P51178 756 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 TOB2Q14106 344 aaPredicted RBP18.11■□□□□ 0.49
VAMP1-207ENST00000539047 WTAPQ15007 396 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 APOBEC3FQ8IUX4 373 aaKnown RBP18.11■□□□□ 0.49
VAMP1-207ENST00000539047 DYNLL2Q96FJ2 89 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 LRRC2Q9BYS8 371 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 ZSWIM5Q9P217 1185 aa18.11■□□□□ 0.49
VAMP1-207ENST00000539047 SH2B2O14492 632 aaPredicted RBP18.1■□□□□ 0.49
VAMP1-207ENST00000539047 DDNO94850 711 aaPredicted RBP18.1■□□□□ 0.49
VAMP1-207ENST00000539047 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
VAMP1-207ENST00000539047 CDK8P49336 464 aa18.1■□□□□ 0.49
VAMP1-207ENST00000539047 ANTXR2P58335 489 aa18.1■□□□□ 0.49
VAMP1-207ENST00000539047 NBPF9Q3BBW0 867 aa18.1■□□□□ 0.49
VAMP1-207ENST00000539047 PPP4R3BQ5MIZ7 849 aa18.1■□□□□ 0.49
VAMP1-207ENST00000539047 SAMD7Q7Z3H4 446 aa18.1■□□□□ 0.49
VAMP1-207ENST00000539047 CSRNP1Q96S65 589 aa18.1■□□□□ 0.49
VAMP1-207ENST00000539047 AGXT2Q9BYV1 514 aa18.1■□□□□ 0.49
VAMP1-207ENST00000539047 ADARB2Q9NS39 739 aaKnown RBP18.1■□□□□ 0.49
VAMP1-207ENST00000539047 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
VAMP1-207ENST00000539047 TNKSO95271 1327 aa18.09■□□□□ 0.49
VAMP1-207ENST00000539047 SHTN1A0MZ66 631 aa18.09■□□□□ 0.49
VAMP1-207ENST00000539047 FOXP4Q8IVH2 680 aaPredicted RBP18.09■□□□□ 0.49
VAMP1-207ENST00000539047 HOOK2Q96ED9 719 aa18.09■□□□□ 0.49
VAMP1-207ENST00000539047 ZSCAN10Q96SZ4 725 aaPredicted RBP18.09■□□□□ 0.49
VAMP1-207ENST00000539047 SLKQ9H2G2 1235 aaPredicted RBP18.09■□□□□ 0.49
VAMP1-207ENST00000539047 INCENPQ9NQS7 918 aa18.09■□□□□ 0.49
VAMP1-207ENST00000539047 HERC5Q9UII4 1024 aaKnown RBP18.09■□□□□ 0.49
VAMP1-207ENST00000539047 KLF18A0A0U1RQI7 1052 aa18.08■□□□□ 0.48
VAMP1-207ENST00000539047 IQCA1LA6NCM1 817 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms