RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 RASGRF1Q13972 1273 aa17.53■□□□□ 0.4
PBX3-212ENST00000538998 Q7L0L9 218 aa17.53■□□□□ 0.4
PBX3-212ENST00000538998 ZNF280CQ8ND82 737 aa17.53■□□□□ 0.4
PBX3-212ENST00000538998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.53■□□□□ 0.4
PBX3-212ENST00000538998 GJD2Q9UKL4 321 aa17.53■□□□□ 0.4
PBX3-212ENST00000538998 OGDHLQ9ULD0 1010 aa17.53■□□□□ 0.4
PBX3-212ENST00000538998 A0A0C4DFX4 3053 aa17.52■□□□□ 0.4
PBX3-212ENST00000538998 HMGCS2P54868 508 aa17.52■□□□□ 0.4
PBX3-212ENST00000538998 MTMR10Q9NXD2 777 aa17.52■□□□□ 0.4
PBX3-212ENST00000538998 LOC285556D6RIA3 1793 aa17.52■□□□□ 0.4
PBX3-212ENST00000538998 MYH2Q9UKX2 1941 aa17.52■□□□□ 0.4
PBX3-212ENST00000538998 COL2A1P02458 1487 aaPredicted RBP17.51■□□□□ 0.39
PBX3-212ENST00000538998 GPR75-ASB3A0A0A6YYF3 556 aa17.51■□□□□ 0.39
PBX3-212ENST00000538998 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
PBX3-212ENST00000538998 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
PBX3-212ENST00000538998 TRIM32Q13049 653 aa17.51■□□□□ 0.39
PBX3-212ENST00000538998 SSH1Q8WYL5 1049 aa17.51■□□□□ 0.39
PBX3-212ENST00000538998 UBE2OQ9C0C9 1292 aaKnown RBP17.51■□□□□ 0.39
PBX3-212ENST00000538998 ASCC2Q9H1I8 757 aaPredicted RBP17.51■□□□□ 0.39
PBX3-212ENST00000538998 MORF4L1Q9UBU8 362 aa17.51■□□□□ 0.39
PBX3-212ENST00000538998 DDX60LQ5H9U9 1706 aaKnown RBP17.5■□□□□ 0.39
PBX3-212ENST00000538998 CUL9Q8IWT3 2517 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 FAM196BA6NMK8 535 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 USP17L5A8MUK1 530 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 ADORA1P30542 326 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 RHBDL3P58872 404 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 MECOMQ03112 1051 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 SH3D19Q5HYK7 790 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 MAP3K21Q5TCX8 1036 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 TRIB2Q92519 343 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 AS3MTQ9HBK9 375 aa17.5■□□□□ 0.39
PBX3-212ENST00000538998 ZNF521Q96K83 1311 aa17.49■□□□□ 0.39
PBX3-212ENST00000538998 ANP32CO43423 234 aa17.49■□□□□ 0.39
PBX3-212ENST00000538998 CAP2P40123 477 aa17.49■□□□□ 0.39
PBX3-212ENST00000538998 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
PBX3-212ENST00000538998 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
PBX3-212ENST00000538998 SOCS4Q8WXH5 440 aa17.49■□□□□ 0.39
PBX3-212ENST00000538998 HDAC5Q9UQL6 1122 aa17.49■□□□□ 0.39
PBX3-212ENST00000538998 PFASO15067 1338 aa17.48■□□□□ 0.39
PBX3-212ENST00000538998 XRCC5P13010 732 aaKnown RBP17.48■□□□□ 0.39
PBX3-212ENST00000538998 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
PBX3-212ENST00000538998 IRX3P78415 501 aaPredicted RBP17.48■□□□□ 0.39
PBX3-212ENST00000538998 GSTO1P78417 241 aa17.48■□□□□ 0.39
PBX3-212ENST00000538998 NUDT12Q9BQG2 462 aa17.48■□□□□ 0.39
PBX3-212ENST00000538998 COPRSQ9NQ92 184 aa17.48■□□□□ 0.39
PBX3-212ENST00000538998 LDHCP07864 332 aa17.47■□□□□ 0.39
PBX3-212ENST00000538998 CYP2B6P20813 491 aa17.47■□□□□ 0.39
PBX3-212ENST00000538998 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
PBX3-212ENST00000538998 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
PBX3-212ENST00000538998 HERC5Q9UII4 1024 aaKnown RBP17.47■□□□□ 0.39
PBX3-212ENST00000538998 PA2G4Q9UQ80 394 aaKnown RBP17.47■□□□□ 0.39
PBX3-212ENST00000538998 DOCK3Q8IZD9 2030 aa17.47■□□□□ 0.39
PBX3-212ENST00000538998 COL6A1P12109 1028 aa17.46■□□□□ 0.39
PBX3-212ENST00000538998 TIMM10P62072 90 aa17.46■□□□□ 0.39
PBX3-212ENST00000538998 PDE3AQ14432 1141 aa17.46■□□□□ 0.39
PBX3-212ENST00000538998 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
PBX3-212ENST00000538998 GPRC5AQ8NFJ5 357 aa17.46■□□□□ 0.39
PBX3-212ENST00000538998 ZNF384Q8TF68 577 aa17.46■□□□□ 0.39
PBX3-212ENST00000538998 AKAP2Q9Y2D5 859 aa17.46■□□□□ 0.39
PBX3-212ENST00000538998 E9PSI1 815 aa17.45■□□□□ 0.38
PBX3-212ENST00000538998 ZKSCAN1P17029 563 aaPredicted RBP17.45■□□□□ 0.38
PBX3-212ENST00000538998 MAPK4P31152 587 aa17.45■□□□□ 0.38
PBX3-212ENST00000538998 HOXA7P31268 230 aaPredicted RBP17.45■□□□□ 0.38
PBX3-212ENST00000538998 MTMR2Q13614 643 aa17.45■□□□□ 0.38
PBX3-212ENST00000538998 XAGE2Q96GT9 111 aa17.45■□□□□ 0.38
PBX3-212ENST00000538998 WDR18Q9BV38 432 aa17.45■□□□□ 0.38
PBX3-212ENST00000538998 TMOD4Q9NZQ9 345 aa17.45■□□□□ 0.38
PBX3-212ENST00000538998 A0A1B0GUL7 405 aa17.44■□□□□ 0.38
PBX3-212ENST00000538998 BACE1P56817 501 aa17.44■□□□□ 0.38
PBX3-212ENST00000538998 HERVK_113P62684 666 aa17.44■□□□□ 0.38
PBX3-212ENST00000538998 CACNB2Q08289 660 aaPredicted RBP17.44■□□□□ 0.38
PBX3-212ENST00000538998 RRP1BQ14684 758 aaKnown RBP17.44■□□□□ 0.38
PBX3-212ENST00000538998 NSUN4Q96CB9 384 aaKnown RBP17.44■□□□□ 0.38
PBX3-212ENST00000538998 PLXNB2O15031 1838 aa17.44■□□□□ 0.38
PBX3-212ENST00000538998 ASNSP08243 561 aa17.43■□□□□ 0.38
PBX3-212ENST00000538998 RGS2P41220 211 aa17.43■□□□□ 0.38
PBX3-212ENST00000538998 LRRC26Q2I0M4 334 aa17.43■□□□□ 0.38
PBX3-212ENST00000538998 FAM109BQ6ICB4 259 aaPredicted RBP17.43■□□□□ 0.38
PBX3-212ENST00000538998 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.43■□□□□ 0.38
PBX3-212ENST00000538998 CCAR1Q8IX12 1150 aaKnown RBP17.43■□□□□ 0.38
PBX3-212ENST00000538998 TEX11Q8IYF3 940 aa17.43■□□□□ 0.38
PBX3-212ENST00000538998 GTF3C2Q8WUA4 911 aaPredicted RBP17.43■□□□□ 0.38
PBX3-212ENST00000538998 P2RX7Q99572 595 aaKnown RBP17.43■□□□□ 0.38
PBX3-212ENST00000538998 COL25A1Q9BXS0 654 aaPredicted RBP17.43■□□□□ 0.38
PBX3-212ENST00000538998 DHX36Q9H2U1 1008 aaKnown RBP17.43■□□□□ 0.38
PBX3-212ENST00000538998 TXNRD2Q9NNW7 524 aa17.43■□□□□ 0.38
PBX3-212ENST00000538998 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
PBX3-212ENST00000538998 PI4KBQ9UBF8 816 aa17.43■□□□□ 0.38
PBX3-212ENST00000538998 ATAD5Q96QE3 1844 aa17.42■□□□□ 0.38
PBX3-212ENST00000538998 C19orf81C9J6K1 198 aa17.42■□□□□ 0.38
PBX3-212ENST00000538998 MDM2Q00987 491 aaPredicted RBP17.42■□□□□ 0.38
PBX3-212ENST00000538998 TFCP2Q12800 502 aa17.42■□□□□ 0.38
PBX3-212ENST00000538998 LHX8Q68G74 356 aa17.42■□□□□ 0.38
PBX3-212ENST00000538998 SPATA5Q8NB90 893 aa17.42■□□□□ 0.38
PBX3-212ENST00000538998 USP6NLQ92738 828 aa17.42■□□□□ 0.38
PBX3-212ENST00000538998 APBA2Q99767 749 aa17.42■□□□□ 0.38
PBX3-212ENST00000538998 RAI14Q9P0K7 980 aa17.42■□□□□ 0.38
PBX3-212ENST00000538998 HMG20BQ9P0W2 317 aa17.42■□□□□ 0.38
PBX3-212ENST00000538998 POTEB2H3BUK9 544 aa17.41■□□□□ 0.38
PBX3-212ENST00000538998 ERVK-9P63128 1117 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms