RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 DACT3Q96B18 629 aaPredicted RBP3.1□□□□□ -1.91
NPIPB4-209ENST00000538859 KRTAP3-1Q9BYR8 98 aa3.1□□□□□ -1.91
NPIPB4-209ENST00000538859 TNFRSF21O75509 655 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 CTSBP07858 339 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 TACR2P21452 398 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 SRPK2P78362 688 aaKnown RBP3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 PCDH1Q08174 1060 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 CDK5R2Q13319 367 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 ZNF423Q2M1K9 1284 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 TMEM164Q5U3C3 297 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 ALKBH2Q6NS38 261 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 DDX54Q8TDD1 881 aaKnown RBP3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 HELQQ8TDG4 1101 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 PCED1AQ9H1Q7 454 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 DAGLAQ9Y4D2 1042 aa3.09□□□□□ -1.91
NPIPB4-209ENST00000538859 A0A096LPE4 126 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 A0A1W2PPZ6 126 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 METTL12A8MUP2 240 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 AOC2O75106 756 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 LEFTY1O75610 366 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 ATP2B4P23634 1241 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 EIF1AXP47813 144 aaKnown RBP3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 EHHADHQ08426 723 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 ZNF827Q17R98 1081 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 PEAR1Q5VY43 1037 aaPredicted RBP3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 SNX29Q8TEQ0 813 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 CORO1BQ9BR76 489 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 CLEC4MQ9H2X3 399 aaPredicted RBP3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 ZFYVE28Q9HCC9 887 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 LATS2Q9NRM7 1088 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 POLIQ9UNA4 740 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 AP4E1Q9UPM8 1137 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 AMOTL2Q9Y2J4 779 aa3.08□□□□□ -1.92
NPIPB4-209ENST00000538859 K7ESM1 405 aa3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 USP5P45974 858 aa3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 KRTAP10-6P60371 365 aaPredicted RBP3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 AAMPQ13685 434 aa3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 SPRED3Q2MJR0 410 aa3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 VMACQ2NL98 169 aa3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 PODXL2Q9NZ53 605 aa3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 SLAIN2Q9P270 581 aa3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 FOXD3Q9UJU5 478 aaPredicted RBP3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 SYNGAP1Q96PV0 1343 aa3.07□□□□□ -1.92
NPIPB4-209ENST00000538859 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 SEMA7AO75326 666 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 ITIH2P19823 946 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 MPSTP25325 297 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 GRIA4P48058 902 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 CCNJLQ8IV13 435 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 SPACA3Q8IXA5 215 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 ABHD4Q8TB40 342 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 SGPP1Q9BX95 441 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 LIN7BQ9HAP6 207 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 DLL4Q9NR61 685 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 PPP1R9AQ9ULJ8 1098 aa3.06□□□□□ -1.92
NPIPB4-209ENST00000538859 A0A1W2PP55 124 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 SUPT5HO00267 1087 aaKnown RBP3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 RFXAPO00287 272 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 ECEL1O95672 775 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 POLR3DP05423 398 aaPredicted RBP3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 SLFN14P0C7P3 912 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 PDE3AQ14432 1141 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 ARHGAP27Q6ZUM4 889 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 FAM214BQ7L5A3 538 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 GTF3C2Q8WUA4 911 aaPredicted RBP3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 HEXIM2Q96MH2 286 aaKnown RBP3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 TCF12Q99081 682 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 TRIM56Q9BRZ2 755 aaKnown RBP3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 WDR18Q9BV38 432 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 CARS2Q9HA77 564 aaKnown RBP3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 PIDD1Q9HB75 910 aa3.05□□□□□ -1.92
NPIPB4-209ENST00000538859 TMPRSS2O15393 492 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 PEX10O60683 326 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 FAM13AO94988 1023 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 B3GALT4O96024 378 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 NPR3P17342 541 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 LIG1P18858 919 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 PI3P19957 117 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 AFF3P51826 1226 aaKnown RBP3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 AP3B2Q13367 1082 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 ZFYVE27Q5T4F4 411 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 CRIP3Q6Q6R5 217 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 GALNT12Q8IXK2 581 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 SP8Q8IXZ3 490 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 SMYD4Q8IYR2 804 aaPredicted RBP3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 VWCEQ96DN2 955 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 ATXN3LQ9H3M9 355 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 EPB41L4AQ9HCS5 686 aaPredicted RBP3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 LUC7LQ9NQ29 371 aaKnown RBP3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 PCOLCE2Q9UKZ9 415 aa3.04□□□□□ -1.92
NPIPB4-209ENST00000538859 TEX51A0A1B0GUA7 166 aa3.03□□□□□ -1.92
NPIPB4-209ENST00000538859 RNGTTO60942 597 aaKnown RBP3.03□□□□□ -1.92
NPIPB4-209ENST00000538859 CILPO75339 1184 aa3.03□□□□□ -1.92
NPIPB4-209ENST00000538859 ERVFC1P60507 584 aa3.03□□□□□ -1.92
NPIPB4-209ENST00000538859 NKPD1Q17RQ9 610 aa3.03□□□□□ -1.92
NPIPB4-209ENST00000538859 KIAA0319Q5VV43 1072 aa3.03□□□□□ -1.92
NPIPB4-209ENST00000538859 FANCD2OSQ96PS1 177 aa3.03□□□□□ -1.92
NPIPB4-209ENST00000538859 DUSP23Q9BVJ7 150 aa3.03□□□□□ -1.92
NPIPB4-209ENST00000538859 DISC1Q9NRI5 854 aa3.03□□□□□ -1.92
NPIPB4-209ENST00000538859 C11orf21Q9P2W6 132 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms