RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 BAZ2AQ9UIF9 1905 aaKnown RBP28.75■■■□□ 2.19
RAB40C-204ENST00000538492 NLRP12P59046 1061 aa28.75■■■□□ 2.19
RAB40C-204ENST00000538492 FANCBQ8NB91 859 aa28.75■■■□□ 2.19
RAB40C-204ENST00000538492 NID2Q14112 1375 aa28.75■■■□□ 2.19
RAB40C-204ENST00000538492 KLRK1P26718 216 aa28.74■■■□□ 2.19
RAB40C-204ENST00000538492 CCDC24Q8N4L8 307 aa28.74■■■□□ 2.19
RAB40C-204ENST00000538492 CRACR2BQ8N4Y2 399 aaPredicted RBP28.74■■■□□ 2.19
RAB40C-204ENST00000538492 TNKSO95271 1327 aa28.74■■■□□ 2.19
RAB40C-204ENST00000538492 SAFBQ15424 915 aaKnown RBP eCLIP28.74■■■□□ 2.19
RAB40C-204ENST00000538492 TMTC2Q8N394 836 aa28.74■■■□□ 2.19
RAB40C-204ENST00000538492 BCL2L12Q9HB09 334 aa28.74■■■□□ 2.19
RAB40C-204ENST00000538492 CACNA1SQ13698 1873 aa28.74■■■□□ 2.19
RAB40C-204ENST00000538492 RBM6P78332 1123 aaKnown RBP28.73■■■□□ 2.19
RAB40C-204ENST00000538492 ZNF384Q8TF68 577 aa28.73■■■□□ 2.19
RAB40C-204ENST00000538492 ESR2Q92731 530 aa28.73■■■□□ 2.19
RAB40C-204ENST00000538492 C16orf45Q96MC5 204 aaPredicted RBP28.73■■■□□ 2.19
RAB40C-204ENST00000538492 MYH2Q9UKX2 1941 aa28.73■■■□□ 2.19
RAB40C-204ENST00000538492 SPECC1Q5M775 1068 aa28.73■■■□□ 2.19
RAB40C-204ENST00000538492 RESP18Q5W5W9 173 aa28.73■■■□□ 2.19
RAB40C-204ENST00000538492 SRP68Q9UHB9 627 aaKnown RBP28.73■■■□□ 2.19
RAB40C-204ENST00000538492 TIGD1Q96MW7 591 aa28.72■■■□□ 2.19
RAB40C-204ENST00000538492 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.72■■■□□ 2.19
RAB40C-204ENST00000538492 PRDM1O75626 825 aa28.72■■■□□ 2.19
RAB40C-204ENST00000538492 TOB1P50616 345 aaPredicted RBP28.72■■■□□ 2.19
RAB40C-204ENST00000538492 CHAF1AQ13111 956 aaPredicted RBP28.72■■■□□ 2.19
RAB40C-204ENST00000538492 PNOCQ13519 176 aa28.72■■■□□ 2.19
RAB40C-204ENST00000538492 BPIFA3Q9BQP9 254 aa28.72■■■□□ 2.19
RAB40C-204ENST00000538492 CCDC196A0A1B0GTZ2 297 aa28.71■■■□□ 2.19
RAB40C-204ENST00000538492 DEXIO95424 95 aa28.71■■■□□ 2.19
RAB40C-204ENST00000538492 NR5A1Q13285 461 aa28.71■■■□□ 2.19
RAB40C-204ENST00000538492 ANAPC4Q9UJX5 808 aa28.71■■■□□ 2.19
RAB40C-204ENST00000538492 LTBP4Q8N2S1 1624 aa28.71■■■□□ 2.19
RAB40C-204ENST00000538492 CUTAO60888 179 aa28.7■■■□□ 2.19
RAB40C-204ENST00000538492 SEC23AQ15436 765 aa28.7■■■□□ 2.19
RAB40C-204ENST00000538492 PDCL3Q9H2J4 239 aa28.7■■■□□ 2.19
RAB40C-204ENST00000538492 MTA3Q9BTC8 594 aa28.7■■■□□ 2.18
RAB40C-204ENST00000538492 LONRF3Q496Y0 759 aa28.69■■■□□ 2.18
RAB40C-204ENST00000538492 SMC2O95347 1197 aa28.69■■■□□ 2.18
RAB40C-204ENST00000538492 ENAHQ8N8S7 591 aaPredicted RBP28.69■■■□□ 2.18
RAB40C-204ENST00000538492 KRI1Q8N9T8 703 aaKnown RBP28.69■■■□□ 2.18
RAB40C-204ENST00000538492 OXER1Q8TDS5 423 aa28.69■■■□□ 2.18
RAB40C-204ENST00000538492 C8orf37Q96NL8 207 aa28.69■■■□□ 2.18
RAB40C-204ENST00000538492 TFCP2L1Q9NZI6 479 aa28.69■■■□□ 2.18
RAB40C-204ENST00000538492 KCNH3Q9ULD8 1083 aa28.69■■■□□ 2.18
RAB40C-204ENST00000538492 ATP2B1P20020 1258 aa28.68■■■□□ 2.18
RAB40C-204ENST00000538492 RPS8P62241 208 aaKnown RBP28.68■■■□□ 2.18
RAB40C-204ENST00000538492 GRIN1Q05586 938 aa28.68■■■□□ 2.18
RAB40C-204ENST00000538492 NBPF5PQ86XG9 351 aaPredicted RBP28.68■■■□□ 2.18
RAB40C-204ENST00000538492 SETDB2Q96T68 719 aa28.68■■■□□ 2.18
RAB40C-204ENST00000538492 XPO4Q9C0E2 1151 aaKnown RBP28.68■■■□□ 2.18
RAB40C-204ENST00000538492 IFNKQ9P0W0 207 aa28.68■■■□□ 2.18
RAB40C-204ENST00000538492 TUBE1Q9UJT0 475 aa28.68■■■□□ 2.18
RAB40C-204ENST00000538492 CNTNAP4Q9C0A0 1308 aa28.68■■■□□ 2.18
RAB40C-204ENST00000538492 SCN7AQ01118 1682 aa28.67■■■□□ 2.18
RAB40C-204ENST00000538492 FAM237AA0A1B0GTK4 181 aa28.67■■■□□ 2.18
RAB40C-204ENST00000538492 RIOK3O14730 519 aaKnown RBP28.67■■■□□ 2.18
RAB40C-204ENST00000538492 GTF2F1P35269 517 aaKnown RBP eCLIP28.67■■■□□ 2.184e-9■■■■■ 33
RAB40C-204ENST00000538492 NCAPHQ15003 741 aa28.67■■■□□ 2.18
RAB40C-204ENST00000538492 SLC10A5Q5PT55 438 aa28.67■■■□□ 2.18
RAB40C-204ENST00000538492 ZSCAN10Q96SZ4 725 aaPredicted RBP28.67■■■□□ 2.18
RAB40C-204ENST00000538492 FOXP1Q9H334 677 aaPredicted RBP28.67■■■□□ 2.18
RAB40C-204ENST00000538492 MYH6P13533 1939 aa28.67■■■□□ 2.18
RAB40C-204ENST00000538492 hCG_1642624A0A1W2PR95 340 aa28.67■■■□□ 2.18
RAB40C-204ENST00000538492 SKILP12757 684 aa28.67■■■□□ 2.18
RAB40C-204ENST00000538492 EVX2Q03828 476 aa28.67■■■□□ 2.18
RAB40C-204ENST00000538492 METTL16Q86W50 562 aaKnown RBP28.67■■■□□ 2.18
RAB40C-204ENST00000538492 NLRP3Q96P20 1036 aa28.67■■■□□ 2.18
RAB40C-204ENST00000538492 TPD52L1Q16890 204 aaPredicted RBP28.66■■■□□ 2.18
RAB40C-204ENST00000538492 CNNM3Q8NE01 707 aa28.66■■■□□ 2.18
RAB40C-204ENST00000538492 PCDHB6Q9Y5E3 794 aa28.66■■■□□ 2.18
RAB40C-204ENST00000538492 LMOD1P29536 600 aaPredicted RBP28.66■■■□□ 2.18
RAB40C-204ENST00000538492 FBXO33Q7Z6M2 555 aa28.66■■■□□ 2.18
RAB40C-204ENST00000538492 BRIP1Q9BX63 1249 aa28.66■■■□□ 2.18
RAB40C-204ENST00000538492 RCAN1P53805 252 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 MECOMQ03112 1051 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 KRBA2Q6ZNG9 492 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 NGLY1Q96IV0 654 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 NARFQ9UHQ1 456 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 JAG2Q9Y219 1238 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 USP17L12C9JPN9 530 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 USP17L21D6R901 530 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 GNPATO15228 680 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 RILPL1Q5EBL4 403 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 IFIT1BQ5T764 474 aaKnown RBP28.65■■■□□ 2.18
RAB40C-204ENST00000538492 CTR9Q6PD62 1173 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 NSUN4Q96CB9 384 aaKnown RBP28.65■■■□□ 2.18
RAB40C-204ENST00000538492 AATFQ9NY61 560 aaKnown RBP eCLIP28.65■■■□□ 2.18
RAB40C-204ENST00000538492 DUOX1Q9NRD9 1551 aa28.65■■■□□ 2.18
RAB40C-204ENST00000538492 SMTNL1A8MU46 457 aa28.64■■■□□ 2.18
RAB40C-204ENST00000538492 FOXN1O15353 648 aa28.64■■■□□ 2.18
RAB40C-204ENST00000538492 NEMFO60524 1076 aa28.64■■■□□ 2.18
RAB40C-204ENST00000538492 TPM4P67936 248 aa28.64■■■□□ 2.18
RAB40C-204ENST00000538492 FAM182BQ5T319 152 aa28.64■■■□□ 2.18
RAB40C-204ENST00000538492 SHISA4Q96DD7 197 aa28.64■■■□□ 2.18
RAB40C-204ENST00000538492 NYXQ9GZU5 481 aa28.64■■■□□ 2.18
RAB40C-204ENST00000538492 CABP5Q9NP86 173 aa28.64■■■□□ 2.18
RAB40C-204ENST00000538492 VPS54Q9P1Q0 977 aa28.64■■■□□ 2.18
RAB40C-204ENST00000538492 USP27XA6NNY8 438 aa28.63■■■□□ 2.17
RAB40C-204ENST00000538492 ZPR1O75312 459 aa28.63■■■□□ 2.17
RAB40C-204ENST00000538492 TNNT1P13805 278 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms