RNA–Protein interactions for RNA: ENST00000538263.5

CYB561A3-211, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4

Gene CYB561A3, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-211ENST00000538263 HMGCS2P54868 508 aa13.85□□□□□ -0.19
CYB561A3-211ENST00000538263 RRP1BQ14684 758 aaKnown RBP13.85□□□□□ -0.19
CYB561A3-211ENST00000538263 TJAP1Q5JTD0 557 aa13.85□□□□□ -0.19
CYB561A3-211ENST00000538263 LBHD1Q9BQE6 289 aaPredicted RBP13.85□□□□□ -0.19
CYB561A3-211ENST00000538263 CTNND1O60716 968 aaKnown RBP13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 NBPF7P0C2Y1 421 aaPredicted RBP13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 GCLCP48506 637 aaPredicted RBP13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 SPP2Q13103 211 aa13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 CCDC27Q2M243 656 aa13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 POTEEQ6S8J3 1075 aa13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 PROCA1Q8NCQ7 364 aaPredicted RBP13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 USP6NLQ92738 828 aa13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 BICC1Q9H694 974 aaKnown RBP13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 MORF4L1Q9UBU8 362 aa13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 PNMA3Q9UL41 463 aa13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 LRRFIP2Q9Y608 721 aaKnown RBP13.84□□□□□ -0.19
CYB561A3-211ENST00000538263 RTP1P59025 263 aa13.83□□□□□ -0.2
CYB561A3-211ENST00000538263 FAM122AQ96E09 287 aa13.83□□□□□ -0.2
CYB561A3-211ENST00000538263 IDI2Q9BXS1 227 aa13.83□□□□□ -0.2
CYB561A3-211ENST00000538263 MYO9BQ13459 2157 aa13.83□□□□□ -0.2
CYB561A3-211ENST00000538263 ENTPD3O75355 529 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 VAMP4O75379 141 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 ZKSCAN1P17029 563 aaPredicted RBP13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 SMAD3P84022 425 aaKnown RBP13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 Q3C1V9 767 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 ZSCAN29Q8IWY8 852 aaPredicted RBP13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 WDR66Q8TBY9 1149 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 NUDT12Q9BQG2 462 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 PORCNQ9H237 461 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 FLRT1Q9NZU1 646 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 IL16Q14005 1332 aa13.82□□□□□ -0.2
CYB561A3-211ENST00000538263 NCOR1O75376 2440 aa13.81□□□□□ -0.2
CYB561A3-211ENST00000538263 CDK5RAP2Q96SN8 1893 aa13.81□□□□□ -0.2
CYB561A3-211ENST00000538263 PLXNA1Q9UIW2 1896 aa13.81□□□□□ -0.2
CYB561A3-211ENST00000538263 XRCC5P13010 732 aaKnown RBP13.81□□□□□ -0.2
CYB561A3-211ENST00000538263 PICALMQ13492 652 aa13.81□□□□□ -0.2
CYB561A3-211ENST00000538263 RABL6Q3YEC7 729 aaPredicted RBP13.81□□□□□ -0.2
CYB561A3-211ENST00000538263 SH3RF1Q7Z6J0 888 aa13.81□□□□□ -0.2
CYB561A3-211ENST00000538263 BADQ92934 168 aa13.81□□□□□ -0.2
CYB561A3-211ENST00000538263 KIF16BQ96L93 1317 aa13.81□□□□□ -0.2
CYB561A3-211ENST00000538263 REV3LO60673 3130 aa13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 ALDH1L1O75891 902 aa13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 EPHB4P54760 987 aa13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 MAP3K12Q12852 859 aa13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 SHROOM1Q2M3G4 852 aaPredicted RBP13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 MORN1Q5T089 497 aa13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 ZNF280CQ8ND82 737 aa13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 P2RX7Q99572 595 aaKnown RBP13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 ATP11BQ9Y2G3 1177 aa13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 GAKO14976 1311 aa13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 FANCIQ9NVI1 1328 aa13.8□□□□□ -0.2
CYB561A3-211ENST00000538263 GBF1Q92538 1859 aa13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 LDHBP07195 334 aaKnown RBP13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 IFIT1P09914 478 aaKnown RBP13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 ITGB8P26012 769 aa13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 JAG1P78504 1218 aa13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 SH3D19Q5HYK7 790 aa13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 GPR142Q7Z601 462 aa13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 SOCS4Q8WXH5 440 aa13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 PRDM5Q9NQX1 630 aaPredicted RBP13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 RBPJLQ9UBG7 517 aa13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 NDUFB9Q9Y6M9 179 aa13.79□□□□□ -0.2
CYB561A3-211ENST00000538263 TRIM43BA6NCK2 446 aa13.78□□□□□ -0.2
CYB561A3-211ENST00000538263 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-211ENST00000538263 SLC4A10Q6U841 1118 aa13.78□□□□□ -0.2
CYB561A3-211ENST00000538263 TRPV1Q8NER1 839 aa13.78□□□□□ -0.2
CYB561A3-211ENST00000538263 TRIM43Q96BQ3 446 aaPredicted RBP13.78□□□□□ -0.2
CYB561A3-211ENST00000538263 APBA2Q99767 749 aa13.78□□□□□ -0.2
CYB561A3-211ENST00000538263 SRCIN1Q9C0H9 1055 aa13.78□□□□□ -0.2
CYB561A3-211ENST00000538263 PDLIM7Q9NR12 457 aa13.78□□□□□ -0.2
CYB561A3-211ENST00000538263 UTYO14607 1347 aa13.78□□□□□ -0.2
CYB561A3-211ENST00000538263 HERVK_113P62684 666 aa13.77□□□□□ -0.21
CYB561A3-211ENST00000538263 EXOSC9Q06265 439 aaKnown RBP13.77□□□□□ -0.21
CYB561A3-211ENST00000538263 TRIM60Q495X7 471 aa13.77□□□□□ -0.21
CYB561A3-211ENST00000538263 GJC2Q5T442 439 aaPredicted RBP13.77□□□□□ -0.21
CYB561A3-211ENST00000538263 ADAMTS19Q8TE59 1207 aa13.77□□□□□ -0.21
CYB561A3-211ENST00000538263 ZNF384Q8TF68 577 aa13.77□□□□□ -0.21
CYB561A3-211ENST00000538263 PPM1EQ8WY54 764 aa13.77□□□□□ -0.21
CYB561A3-211ENST00000538263 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.77□□□□□ -0.21
CYB561A3-211ENST00000538263 PRKAG2Q9UGJ0 569 aa13.77□□□□□ -0.21
CYB561A3-211ENST00000538263 SMCHD1A6NHR9 2005 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 SALL1Q9NSC2 1324 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 BDP1A6H8Y1 2624 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 SLC5A1P13866 664 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 RGS2P41220 211 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 BTDP43251 543 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 PHKA1P46020 1223 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 RFX5P48382 616 aaPredicted RBP13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 RHBDL3P58872 404 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 ERVK-9P63128 1117 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 ERVK-24P63145 666 aa13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 IRX3P78415 501 aaPredicted RBP13.76□□□□□ -0.21
CYB561A3-211ENST00000538263 MTMR2Q13614 643 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms