RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TRMT44Q8IYL2 757 aaKnown RBP4.22□□□□□ -1.73
PTPN22-211ENST00000538253 MAGEB6Q8N7X4 407 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 RILPL2Q969X0 211 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 NSUN4Q96CB9 384 aaKnown RBP4.22□□□□□ -1.73
PTPN22-211ENST00000538253 SGSM3Q96HU1 749 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 PDCL3Q9H2J4 239 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 MKNK2Q9HBH9 465 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 MTMR7Q9Y216 660 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 SLC45A1Q9Y2W3 748 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 DAGLAQ9Y4D2 1042 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CHD4Q14839 1912 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 IRF6O14896 467 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 ZAP70P43403 619 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 C1QTNF8P60827 252 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 MECOMQ03112 1051 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 SNAPC2Q13487 334 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 DEFB115Q30KQ5 88 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 TTC22Q5TAA0 569 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 ANGEL2Q5VTE6 544 aaKnown RBP4.22□□□□□ -1.73
PTPN22-211ENST00000538253 EGFL6Q8IUX8 553 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CCAR1Q8IX12 1150 aaKnown RBP4.22□□□□□ -1.73
PTPN22-211ENST00000538253 ESR2Q92731 530 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 LNPKQ9C0E8 428 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 SAGE1Q9NXZ1 904 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 FER1L6Q2WGJ9 1857 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 RAD21O60216 631 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CELF2O95319 508 aaKnown RBP4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CALM1P0DP23 149 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CALM2P0DP24 149 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CALM3P0DP25 149 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 SCNN1DP51172 638 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 PPATQ06203 517 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 ANKRD1Q15327 319 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 ZMYM1Q5SVZ6 1142 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 RGMBQ6NW40 437 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 TMEM179Q6ZVK1 233 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CDCA5Q96FF9 252 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 ZBED3Q96IU2 234 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-211ENST00000538253 LZTS2Q9BRK4 669 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 GLT8D2Q9H1C3 349 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 DEFB129Q9H1M3 183 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.22□□□□□ -1.73
PTPN22-211ENST00000538253 GOPCQ9HD26 462 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 PCDHB15Q9Y5E8 787 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 SLC4A4Q9Y6R1 1079 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CCDC171Q6TFL3 1326 aa4.21□□□□□ -1.73
PTPN22-211ENST00000538253 SLX4Q8IY92 1834 aa4.21□□□□□ -1.73
PTPN22-211ENST00000538253 ATRNL1Q5VV63 1379 aa4.21□□□□□ -1.73
PTPN22-211ENST00000538253 COL11A2P13942 1736 aaPredicted RBP4.21□□□□□ -1.74
PTPN22-211ENST00000538253 CCDC196A0A1B0GTZ2 297 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 YDJCA8MPS7 323 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 F8W031 263 aaPredicted RBP4.21□□□□□ -1.74
PTPN22-211ENST00000538253 WNT10BO00744 389 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 MCAMP43121 646 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 GCLCP48506 637 aaPredicted RBP4.21□□□□□ -1.74
PTPN22-211ENST00000538253 SEMA3FQ13275 785 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 PPIL2Q13356 520 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 RASA3Q14644 834 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 NOM1Q5C9Z4 860 aaKnown RBP4.21□□□□□ -1.74
PTPN22-211ENST00000538253 ANKRD23Q86SG2 305 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 SAMD3Q8N6K7 520 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 MB21D1Q8N884 522 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 KLHDC4Q8TBB5 520 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 LPAR1Q92633 364 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 KANSL2Q9H9L4 492 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 SERPINB13Q9UIV8 391 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 MYPNQ86TC9 1320 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L5A8MUK1 530 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 ZNF213O14771 459 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 DHX16O60231 1041 aaKnown RBP4.21□□□□□ -1.74
PTPN22-211ENST00000538253 ADORA1P30542 326 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 EPS15P42566 896 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 HUNKP57058 714 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L2Q6R6M4 530 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 TTC14Q96N46 770 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 CSRNP1Q96S65 589 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 PARK7Q99497 189 aaKnown RBP4.21□□□□□ -1.74
PTPN22-211ENST00000538253 FEZ1Q99689 392 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 TLL2Q9Y6L7 1015 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 ZNF532Q9HCE3 1301 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 IRS2Q9Y4H2 1338 aa4.21□□□□□ -1.74
PTPN22-211ENST00000538253 HOXC6P09630 235 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 KIF5BP33176 963 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 FOXD4L6Q3SYB3 417 aaPredicted RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 B4GALNT3Q6L9W6 998 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 FOXD4L3Q6VB84 417 aaPredicted RBP4.2□□□□□ -1.74
PTPN22-211ENST00000538253 FAM160B2Q86V87 743 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 SCYL3Q8IZE3 742 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 CHURC1Q8WUH1 139 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 EHMT1Q9H9B1 1298 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 ZFYVE28Q9HCC9 887 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 MCM9Q9NXL9 1143 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 KIAA1551Q9HCM1 1747 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 RASSF10A6NK89 507 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 HAX1O00165 279 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 KIF3CO14782 793 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 MBD4O95243 580 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 MCM2P49736 904 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 RCAN1P53805 252 aa4.2□□□□□ -1.74
PTPN22-211ENST00000538253 PKN2Q16513 984 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms