RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 C2orf69Q8N8R5 385 aa15.76■□□□□ 0.11
CHFR-216ENST00000538235 NKX2-3Q8TAU0 364 aa15.76■□□□□ 0.11
CHFR-216ENST00000538235 ZKSCAN4Q969J2 545 aaPredicted RBP15.76■□□□□ 0.11
CHFR-216ENST00000538235 AIDAQ96BJ3 306 aa15.76■□□□□ 0.11
CHFR-216ENST00000538235 CRNKL1Q9BZJ0 848 aaKnown RBP15.76■□□□□ 0.11
CHFR-216ENST00000538235 SLC4A4Q9Y6R1 1079 aa15.76■□□□□ 0.11
CHFR-216ENST00000538235 SLC10A3P09131 477 aa15.75■□□□□ 0.11
CHFR-216ENST00000538235 FKBP1BP68106 108 aa15.75■□□□□ 0.11
CHFR-216ENST00000538235 GABPAQ06546 454 aa15.75■□□□□ 0.11
CHFR-216ENST00000538235 TTLL12Q14166 644 aaPredicted RBP15.75■□□□□ 0.11
CHFR-216ENST00000538235 SUPT20HL1Q3ZLR7 823 aa15.75■□□□□ 0.11
CHFR-216ENST00000538235 ZSCAN29Q8IWY8 852 aaPredicted RBP15.75■□□□□ 0.11
CHFR-216ENST00000538235 DYNLL2Q96FJ2 89 aa15.75■□□□□ 0.11
CHFR-216ENST00000538235 PARP14Q460N5 1801 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 CHMLP26374 656 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 DEFB115Q30KQ5 88 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 RGMBQ6NW40 437 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 CAPNS2Q96L46 248 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 WRNIP1Q96S55 665 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 MCM9Q9NXL9 1143 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.74■□□□□ 0.11
CHFR-216ENST00000538235 MYH4Q9Y623 1939 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 ROBO3Q96MS0 1386 aa15.74■□□□□ 0.11
CHFR-216ENST00000538235 CCDC171Q6TFL3 1326 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 SHMT1P34896 483 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 NF2P35240 595 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
CHFR-216ENST00000538235 GRM1Q13255 1194 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 CWC27Q6UX04 472 aaKnown RBP15.73■□□□□ 0.11
CHFR-216ENST00000538235 HHIPL1Q96JK4 782 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 ZNF341Q9BYN7 854 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 NBPF3Q9H094 633 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 ELP3Q9H9T3 547 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 HELLSQ9NRZ9 838 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 ZSWIM8A7E2V4 1837 aa15.73■□□□□ 0.11
CHFR-216ENST00000538235 WDR33Q9C0J8 1336 aaKnown RBP15.72■□□□□ 0.11
CHFR-216ENST00000538235 USP17L12C9JPN9 530 aa15.72■□□□□ 0.11
CHFR-216ENST00000538235 USP17L21D6R901 530 aa15.72■□□□□ 0.11
CHFR-216ENST00000538235 BMP2KLQ5H9B9 411 aa15.72■□□□□ 0.11
CHFR-216ENST00000538235 C12orf60Q5U649 245 aa15.72■□□□□ 0.11
CHFR-216ENST00000538235 ARMC9Q7Z3E5 817 aa15.72■□□□□ 0.11
CHFR-216ENST00000538235 CERS3Q8IU89 383 aa15.72■□□□□ 0.11
CHFR-216ENST00000538235 IFNL3Q8IZI9 196 aa15.72■□□□□ 0.11
CHFR-216ENST00000538235 PPP1R12BO60237 982 aaPredicted RBP15.71■□□□□ 0.11
CHFR-216ENST00000538235 TBC1D12O60347 775 aa15.71■□□□□ 0.11
CHFR-216ENST00000538235 GDF11O95390 407 aa15.71■□□□□ 0.11
CHFR-216ENST00000538235 MAP3K9P80192 1104 aa15.71■□□□□ 0.11
CHFR-216ENST00000538235 MCMDC2Q4G0Z9 681 aa15.71■□□□□ 0.11
CHFR-216ENST00000538235 NOL9Q5SY16 702 aaKnown RBP15.71■□□□□ 0.11
CHFR-216ENST00000538235 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
CHFR-216ENST00000538235 EHD4Q9H223 541 aa15.71■□□□□ 0.11
CHFR-216ENST00000538235 ATP8A2Q9NTI2 1148 aa15.71■□□□□ 0.11
CHFR-216ENST00000538235 HSPD1P10809 573 aaKnown RBP15.7■□□□□ 0.1
CHFR-216ENST00000538235 GUCY1A2P33402 732 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 IREB2P48200 963 aaKnown RBP15.7■□□□□ 0.1
CHFR-216ENST00000538235 ZNF157P51786 506 aaPredicted RBP15.7■□□□□ 0.1
CHFR-216ENST00000538235 DGKZQ13574 1117 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 SPRYD7Q5W111 196 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 DCAF15Q66K64 600 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 PAXIP1Q6ZW49 1069 aaPredicted RBP15.7■□□□□ 0.1
CHFR-216ENST00000538235 CLEC10AQ8IUN9 316 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 ANKRD13AQ8IZ07 590 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 DHX36Q9H2U1 1008 aaKnown RBP15.7■□□□□ 0.1
CHFR-216ENST00000538235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.7■□□□□ 0.14e-18■■■■■ 49.5
CHFR-216ENST00000538235 INCENPQ9NQS7 918 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 DIAPH3Q9NSV4 1193 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 PI4KBQ9UBF8 816 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 TAF6LQ9Y6J9 622 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 RLFQ13129 1914 aa15.7■□□□□ 0.1
CHFR-216ENST00000538235 SPDYE5A6NIY4 337 aa15.69■□□□□ 0.1
CHFR-216ENST00000538235 PATL2C9JE40 543 aaKnown RBP15.69■□□□□ 0.1
CHFR-216ENST00000538235 PTH1RQ03431 593 aa15.69■□□□□ 0.1
CHFR-216ENST00000538235 TATDN1Q6P1N9 297 aa15.69■□□□□ 0.1
CHFR-216ENST00000538235 STK11IPQ8N1F8 1099 aa15.69■□□□□ 0.1
CHFR-216ENST00000538235 OPTNQ96CV9 577 aa15.69■□□□□ 0.1
CHFR-216ENST00000538235 SERPINB13Q9UIV8 391 aa15.69■□□□□ 0.1
CHFR-216ENST00000538235 SGSM2O43147 1006 aa15.68■□□□□ 0.1
CHFR-216ENST00000538235 CAP2P40123 477 aa15.68■□□□□ 0.1
CHFR-216ENST00000538235 MOGSQ13724 837 aa15.68■□□□□ 0.1
CHFR-216ENST00000538235 SBK1Q52WX2 424 aa15.68■□□□□ 0.1
CHFR-216ENST00000538235 SCYL3Q8IZE3 742 aa15.68■□□□□ 0.1
CHFR-216ENST00000538235 JMYQ8N9B5 988 aa15.68■□□□□ 0.1
CHFR-216ENST00000538235 OTUD5Q96G74 571 aa15.68■□□□□ 0.1
CHFR-216ENST00000538235 HERC5Q9UII4 1024 aaKnown RBP15.68■□□□□ 0.1
CHFR-216ENST00000538235 POLR3DP05423 398 aaPredicted RBP15.67■□□□□ 0.1
CHFR-216ENST00000538235 HLA-DOAP06340 250 aa15.67■□□□□ 0.1
CHFR-216ENST00000538235 AKR1B1P15121 316 aa15.67■□□□□ 0.1
CHFR-216ENST00000538235 KIF23Q02241 960 aaPredicted RBP15.67■□□□□ 0.1
CHFR-216ENST00000538235 CTDSPL2Q05D32 466 aa15.67■□□□□ 0.1
CHFR-216ENST00000538235 COL9A3Q14050 684 aaPredicted RBP15.67■□□□□ 0.1
CHFR-216ENST00000538235 LRRFIP1Q32MZ4 808 aaKnown RBP15.67■□□□□ 0.1
CHFR-216ENST00000538235 GIMAP6Q6P9H5 292 aa15.67■□□□□ 0.1
CHFR-216ENST00000538235 C16orf86Q6ZW13 317 aa15.67■□□□□ 0.1
CHFR-216ENST00000538235 TICAM2Q86XR7 235 aa15.67■□□□□ 0.1
CHFR-216ENST00000538235 TBC1D10CQ8IV04 446 aa15.67■□□□□ 0.1
CHFR-216ENST00000538235 MS4A4AQ96JQ5 239 aa15.67■□□□□ 0.1
CHFR-216ENST00000538235 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHFR-216ENST00000538235 ARPP21Q9UBL0 812 aaPredicted RBP15.67■□□□□ 0.1
CHFR-216ENST00000538235 ZBTB21Q9ULJ3 1066 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms