RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PLIN2Q99541 437 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 ZNF213O14771 459 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 ZMYND10O75800 440 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 IFIT1P09914 478 aaKnown RBP6.29□□□□□ -1.4
CSMD1-215ENST00000537824 MYO1EQ12965 1108 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 NUDCD3Q8IVD9 361 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 SPDL1Q96EA4 605 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 GAS8O95995 478 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 CLCN6P51797 869 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 C16orf87Q6PH81 154 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 CROCCP2Q86T23 111 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 PPP1R13BQ96KQ4 1090 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 NOP53Q9NZM5 478 aaKnown RBP6.29□□□□□ -1.4
CSMD1-215ENST00000537824 FAM169AQ9Y6X4 670 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 IFNAR2P48551 515 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 NLRP6P59044 892 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 PLEKHM2Q8IWE5 1019 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 LEO1Q8WVC0 666 aaPredicted RBP6.29□□□□□ -1.4
CSMD1-215ENST00000537824 CCT6BQ92526 530 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 RILPQ96NA2 401 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 TRPA1O75762 1119 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 ESRRGP62508 458 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 NRBP1Q9UHY1 535 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 FAM135AQ9P2D6 1515 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 ADKP55263 362 aaKnown RBP6.29□□□□□ -1.4
CSMD1-215ENST00000537824 ITIH3Q06033 890 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 PTPRCP08575 1304 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 SH3BP5O60239 455 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 RRS1Q15050 365 aaKnown RBP6.28□□□□□ -1.4
CSMD1-215ENST00000537824 TRIM58Q8NG06 486 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 RPGRIP1Q96KN7 1286 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 HINFPQ9BQA5 517 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 SNRKQ9NRH2 765 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 TTC41PQ6P2S7 1318 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 CA8P35219 290 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 PEX26Q7Z412 305 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 LRRC27Q9C0I9 530 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 POLR2DO15514 142 aaKnown RBP6.28□□□□□ -1.4
CSMD1-215ENST00000537824 HNRNPCP07910 306 aaKnown RBP eCLIP6.28□□□□□ -1.4
CSMD1-215ENST00000537824 MX2P20592 715 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 FBXO41Q8TF61 875 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 SBNO1A3KN83 1393 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 GRAMD4Q6IC98 578 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 FBXO18Q8NFZ0 1043 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 FERMT1Q9BQL6 677 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 FAM167BQ9BTA0 163 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 PPP2R2CQ9Y2T4 447 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 FLOT1O75955 427 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 CCDC13Q8IYE1 715 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 SCINQ9Y6U3 715 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 BTBD11A6QL63 1104 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 SKOR1P84550 965 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 ASIC2Q16515 512 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 ANKRD20A3Q5VUR7 823 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 STXBP4Q6ZWJ1 553 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 KCNH3Q9ULD8 1083 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 WWC3Q9ULE0 1092 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 ZNF202O95125 648 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 EEF1DP29692 281 aaKnown RBP6.28□□□□□ -1.4
CSMD1-215ENST00000537824 CTNNA1P35221 906 aaKnown RBP6.28□□□□□ -1.4
CSMD1-215ENST00000537824 KRT9P35527 623 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 ACTR5Q9H9F9 607 aaPredicted RBP6.28□□□□□ -1.4
CSMD1-215ENST00000537824 HOMER3Q9NSC5 361 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 HDAC9Q9UKV0 1011 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 KRT15P19012 456 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 WTAPQ15007 396 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 RPS6KA1Q15418 735 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 AMOTQ4VCS5 1084 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 NCOA7Q8NI08 942 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 EVI5O60447 810 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 NMIQ13287 307 aaPredicted RBP6.28□□□□□ -1.4
CSMD1-215ENST00000537824 ANO1Q5XXA6 986 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 CREB3L3Q68CJ9 461 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 RNF41Q9H4P4 317 aaPredicted RBP6.28□□□□□ -1.4
CSMD1-215ENST00000537824 NFE2L3Q9Y4A8 694 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 SEPT2Q15019 361 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 CCDC14Q49A88 953 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 ATL3Q6DD88 541 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 MKNK2Q9HBH9 465 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 ANGPTL2Q9UKU9 493 aa6.28□□□□□ -1.4
CSMD1-215ENST00000537824 TROVE2P10155 538 aaKnown RBP eCLIP6.27□□□□□ -1.4
CSMD1-215ENST00000537824 MAGEA1P43355 309 aa6.27□□□□□ -1.4
CSMD1-215ENST00000537824 TAF7Q15545 349 aaPredicted RBP6.27□□□□□ -1.4
CSMD1-215ENST00000537824 DTNBP1Q96EV8 351 aa6.27□□□□□ -1.4
CSMD1-215ENST00000537824 TAB2Q9NYJ8 693 aa6.27□□□□□ -1.4
CSMD1-215ENST00000537824 PDCD2Q16342 344 aaPredicted RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 ATP2A3Q93084 1043 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 PTPDC1A2A3K4 754 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 TBC1D8O95759 1140 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 APOEP02649 317 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 MFSD6Q6ZSS7 791 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 TBC1D8BQ0IIM8 1120 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 LRRC8AQ8IWT6 810 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 CDK19Q9BWU1 502 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 GEMIN8Q9NWZ8 242 aaKnown RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 DCAF17Q5H9S7 520 aaPredicted RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 C16orf71Q8IYS4 520 aaPredicted RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 BCAP29Q9UHQ4 241 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms