RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 TBC1D12O60347 775 aa16.31■□□□□ 0.2
RPAIN-205ENST00000536255 ALDH1A1P00352 501 aa16.31■□□□□ 0.2
RPAIN-205ENST00000536255 TICAM2Q86XR7 235 aa16.31■□□□□ 0.2
RPAIN-205ENST00000536255 IFNL1Q8IU54 200 aa16.31■□□□□ 0.2
RPAIN-205ENST00000536255 TNS4Q8IZW8 715 aa16.31■□□□□ 0.2
RPAIN-205ENST00000536255 MS4A4AQ96JQ5 239 aa16.31■□□□□ 0.2
RPAIN-205ENST00000536255 DHX36Q9H2U1 1008 aaKnown RBP16.31■□□□□ 0.2
RPAIN-205ENST00000536255 TRIM6-TRIM34B2RNG4 842 aa16.3■□□□□ 0.2
RPAIN-205ENST00000536255 IGF2BP3O00425 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
RPAIN-205ENST00000536255 RNF113AO15541 343 aaKnown RBP16.3■□□□□ 0.2
RPAIN-205ENST00000536255 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
RPAIN-205ENST00000536255 GTF2A2P52657 109 aa16.3■□□□□ 0.2
RPAIN-205ENST00000536255 PPATQ06203 517 aa16.3■□□□□ 0.2
RPAIN-205ENST00000536255 PPIL2Q13356 520 aa16.3■□□□□ 0.2
RPAIN-205ENST00000536255 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
RPAIN-205ENST00000536255 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■■□□□ 11.6
RPAIN-205ENST00000536255 FOCADQ5VW36 1801 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 IRF6O14896 467 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 PDE4AP27815 886 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 SCYL3Q8IZE3 742 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 CFHR5Q9BXR6 569 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 PI4KBQ9UBF8 816 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 HERC5Q9UII4 1024 aaKnown RBP16.29■□□□□ 0.2
RPAIN-205ENST00000536255 CDK5RAP2Q96SN8 1893 aa16.29■□□□□ 0.2
RPAIN-205ENST00000536255 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
RPAIN-205ENST00000536255 USP5P45974 858 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 CCL15Q16663 113 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 OTUD7BQ6GQQ9 843 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 APPBP2Q92624 585 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 RILPL2Q969X0 211 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 PTPN18Q99952 460 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 CRNKL1Q9BZJ0 848 aaKnown RBP16.28■□□□□ 0.2
RPAIN-205ENST00000536255 PICK1Q9NRD5 415 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 SAP30BPQ9UHR5 308 aaKnown RBP16.28■□□□□ 0.2
RPAIN-205ENST00000536255 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
RPAIN-205ENST00000536255 CETPP11597 493 aa16.27■□□□□ 0.2
RPAIN-205ENST00000536255 MBD4O95243 580 aa16.26■□□□□ 0.19
RPAIN-205ENST00000536255 HLA-DOAP06340 250 aa16.26■□□□□ 0.19
RPAIN-205ENST00000536255 PTPRAP18433 802 aa16.26■□□□□ 0.19
RPAIN-205ENST00000536255 SLFNL1Q499Z3 407 aa16.26■□□□□ 0.19
RPAIN-205ENST00000536255 NOM1Q5C9Z4 860 aaKnown RBP16.26■□□□□ 0.19
RPAIN-205ENST00000536255 TTC22Q5TAA0 569 aa16.26■□□□□ 0.19
RPAIN-205ENST00000536255 METTL16Q86W50 562 aaKnown RBP16.26■□□□□ 0.19
RPAIN-205ENST00000536255 FOXP4Q8IVH2 680 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-205ENST00000536255 LCORLQ8N3X6 602 aa16.26■□□□□ 0.19
RPAIN-205ENST00000536255 KCNH4Q9UQ05 1017 aa16.26■□□□□ 0.19
RPAIN-205ENST00000536255 SIPA1L1O43166 1804 aa16.26■□□□□ 0.19
RPAIN-205ENST00000536255 MYH7P12883 1935 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 DOCK1Q14185 1865 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 HIP1O00291 1037 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 SLC4A8Q2Y0W8 1093 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 CRACR2BQ8N4Y2 399 aaPredicted RBP16.25■□□□□ 0.19
RPAIN-205ENST00000536255 DDRGK1Q96HY6 314 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 PUS7LQ9H0K6 701 aaKnown RBP16.25■□□□□ 0.19
RPAIN-205ENST00000536255 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 DNAJC18Q9H819 358 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 ARMT1Q9H993 441 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 ZHX2Q9Y6X8 837 aa16.25■□□□□ 0.19
RPAIN-205ENST00000536255 GPR25O00155 361 aa16.24■□□□□ 0.19
RPAIN-205ENST00000536255 CHGBP05060 677 aa16.24■□□□□ 0.19
RPAIN-205ENST00000536255 CAP2P40123 477 aa16.24■□□□□ 0.19
RPAIN-205ENST00000536255 CRHR2Q13324 411 aa16.24■□□□□ 0.19
RPAIN-205ENST00000536255 ZMYM1Q5SVZ6 1142 aa16.24■□□□□ 0.19
RPAIN-205ENST00000536255 FAM43AQ8N2R8 423 aa16.24■□□□□ 0.19
RPAIN-205ENST00000536255 ZNF296Q8WUU4 475 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-205ENST00000536255 OSBP2Q969R2 916 aa16.24■□□□□ 0.19
RPAIN-205ENST00000536255 DDX60LQ5H9U9 1706 aaKnown RBP16.24■□□□□ 0.19
RPAIN-205ENST00000536255 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
RPAIN-205ENST00000536255 CXCL11O14625 94 aa16.23■□□□□ 0.19
RPAIN-205ENST00000536255 GNAT2P19087 354 aa16.23■□□□□ 0.19
RPAIN-205ENST00000536255 RRP1BQ14684 758 aaKnown RBP16.23■□□□□ 0.19
RPAIN-205ENST00000536255 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
RPAIN-205ENST00000536255 EHD4Q9H223 541 aa16.23■□□□□ 0.19
RPAIN-205ENST00000536255 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
RPAIN-205ENST00000536255 HELLSQ9NRZ9 838 aa16.23■□□□□ 0.19
RPAIN-205ENST00000536255 ATP8A2Q9NTI2 1148 aa16.23■□□□□ 0.19
RPAIN-205ENST00000536255 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.23■□□□□ 0.19
RPAIN-205ENST00000536255 AFG3L2Q9Y4W6 797 aa16.23■□□□□ 0.19
RPAIN-205ENST00000536255 CASP8AP2Q9UKL3 1982 aa16.23■□□□□ 0.19
RPAIN-205ENST00000536255 GPAA1O43292 621 aa16.22■□□□□ 0.19
RPAIN-205ENST00000536255 MOGSQ13724 837 aa16.22■□□□□ 0.19
RPAIN-205ENST00000536255 TAF1CQ15572 869 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-205ENST00000536255 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
RPAIN-205ENST00000536255 CCDC84Q86UT8 332 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-205ENST00000536255 AMOTL1Q8IY63 956 aa16.22■□□□□ 0.19
RPAIN-205ENST00000536255 SDR42E1Q8WUS8 393 aa16.22■□□□□ 0.19
RPAIN-205ENST00000536255 DCP1AQ9NPI6 582 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-205ENST00000536255 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
RPAIN-205ENST00000536255 SERPINB13Q9UIV8 391 aa16.22■□□□□ 0.19
RPAIN-205ENST00000536255 SLC4A4Q9Y6R1 1079 aa16.22■□□□□ 0.19
RPAIN-205ENST00000536255 NAV1Q8NEY1 1877 aa16.21■□□□□ 0.19
RPAIN-205ENST00000536255 A0A0G2JLL6 359 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-205ENST00000536255 PRKAB2O43741 272 aa16.21■□□□□ 0.19
RPAIN-205ENST00000536255 FKTNO75072 461 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms