RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 MAP1SQ66K74 1059 aaPredicted RBP5.35□□□□□ -1.55
SKA3-207ENST00000536239 SULF2Q8IWU5 870 aa5.35□□□□□ -1.55
SKA3-207ENST00000536239 GPBAR1Q8TDU6 330 aa5.35□□□□□ -1.55
SKA3-207ENST00000536239 DIRC2Q96SL1 478 aa5.35□□□□□ -1.55
SKA3-207ENST00000536239 NSUN3Q9H649 340 aaKnown RBP5.35□□□□□ -1.55
SKA3-207ENST00000536239 INHBBP09529 407 aa5.34□□□□□ -1.55
SKA3-207ENST00000536239 NTF4P34130 210 aa5.34□□□□□ -1.55
SKA3-207ENST00000536239 FCGRTP55899 365 aa5.34□□□□□ -1.55
SKA3-207ENST00000536239 KCNA10Q16322 511 aa5.34□□□□□ -1.55
SKA3-207ENST00000536239 NPAS4Q8IUM7 802 aa5.34□□□□□ -1.55
SKA3-207ENST00000536239 EPS8L3Q8TE67 593 aaKnown RBP5.34□□□□□ -1.55
SKA3-207ENST00000536239 FOXQ1Q9C009 403 aa5.34□□□□□ -1.55
SKA3-207ENST00000536239 CD320Q9NPF0 282 aa5.34□□□□□ -1.55
SKA3-207ENST00000536239 SEMA3GQ9NS98 782 aa5.34□□□□□ -1.55
SKA3-207ENST00000536239 CACNA2D2Q9NY47 1150 aa5.34□□□□□ -1.55
SKA3-207ENST00000536239 NME2P22392 152 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 ZNF252P-AS1Q0IIN9 211 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 ATG14Q6ZNE5 492 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 UBE3DQ7Z6J8 389 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 HSPA12BQ96MM6 686 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 CITED4Q96RK1 184 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 EMILIN2Q9BXX0 1053 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 NIF3L1Q9GZT8 377 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 KCNK12Q9HB15 430 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 ATP13A1Q9HD20 1204 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 PRDM5Q9NQX1 630 aaPredicted RBP5.33□□□□□ -1.56
SKA3-207ENST00000536239 PPP4R2Q9NY27 417 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 MAPK8IP1Q9UQF2 711 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 CSADQ9Y600 493 aa5.33□□□□□ -1.56
SKA3-207ENST00000536239 CARNS1A5YM72 827 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 H3BRB1 525 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 IGHA2P01877 340 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 MED14OSP0DP75 135 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 XRCC5P13010 732 aaKnown RBP5.32□□□□□ -1.56
SKA3-207ENST00000536239 CTSWP56202 376 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 ARHGAP4P98171 946 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 RING1Q06587 406 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 CIAPIN1Q6FI81 312 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 GLYCTKQ8IVS8 523 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 ACSBG1Q96GR2 724 aa5.32□□□□□ -1.56
SKA3-207ENST00000536239 TUT1Q9H6E5 874 aaKnown RBP5.32□□□□□ -1.56
SKA3-207ENST00000536239 DCP1AQ9NPI6 582 aaPredicted RBP5.32□□□□□ -1.56
SKA3-207ENST00000536239 GPR182O15218 404 aa5.31□□□□□ -1.56
SKA3-207ENST00000536239 FANCGO15287 622 aa5.31□□□□□ -1.56
SKA3-207ENST00000536239 PPP1R15AO75807 674 aaPredicted RBP5.31□□□□□ -1.56
SKA3-207ENST00000536239 MPRIPQ6WCQ1 1025 aa5.31□□□□□ -1.56
SKA3-207ENST00000536239 CDC37L1Q7L3B6 337 aa5.31□□□□□ -1.56
SKA3-207ENST00000536239 C12orf40Q86WS4 652 aa5.31□□□□□ -1.56
SKA3-207ENST00000536239 CCDC120Q96HB5 630 aa5.31□□□□□ -1.56
SKA3-207ENST00000536239 CSRNP1Q96S65 589 aa5.31□□□□□ -1.56
SKA3-207ENST00000536239 EPB41L4BQ9H329 900 aa5.31□□□□□ -1.56
SKA3-207ENST00000536239 PICK1Q9NRD5 415 aa5.31□□□□□ -1.56
SKA3-207ENST00000536239 TCAF2A6NFQ2 919 aa5.3□□□□□ -1.56
SKA3-207ENST00000536239 DCDC2CA8MYV0 355 aa5.3□□□□□ -1.56
SKA3-207ENST00000536239 PRR33A8MZF0 331 aa5.3□□□□□ -1.56
SKA3-207ENST00000536239 FAM155AB1AL88 458 aaPredicted RBP5.3□□□□□ -1.56
SKA3-207ENST00000536239 ETV2O00321 342 aaPredicted RBP5.3□□□□□ -1.56
SKA3-207ENST00000536239 GLDCP23378 1020 aa5.3□□□□□ -1.56
SKA3-207ENST00000536239 ZBTB37Q5TC79 503 aa5.3□□□□□ -1.56
SKA3-207ENST00000536239 CDKAL1Q5VV42 579 aa5.3□□□□□ -1.56
SKA3-207ENST00000536239 C22orf34Q6ZV56 151 aa5.3□□□□□ -1.56
SKA3-207ENST00000536239 KCT2Q8NC54 265 aa5.3□□□□□ -1.56
SKA3-207ENST00000536239 CBX8Q9HC52 389 aa5.3□□□□□ -1.56
SKA3-207ENST00000536239 SMG5Q9UPR3 1016 aaKnown RBP5.3□□□□□ -1.56
SKA3-207ENST00000536239 CNTNAP4Q9C0A0 1308 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 H3BS24 57 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 HOXA5P20719 270 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 ARMCX6Q7L4S7 300 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 MFSD4AQ8N468 514 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 ABHD4Q8TB40 342 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 TMC1Q8TDI8 760 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 C20orf173Q96LM9 149 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 ALPK1Q96QP1 1244 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 BCO2Q9BYV7 579 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 NLRP2Q9NX02 1062 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 AKAP2Q9Y2D5 859 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 ST14Q9Y5Y6 855 aa5.29□□□□□ -1.56
SKA3-207ENST00000536239 LRIG2O94898 1065 aa5.28□□□□□ -1.56
SKA3-207ENST00000536239 SLITRK5O94991 958 aa5.28□□□□□ -1.56
SKA3-207ENST00000536239 BMP6P22004 513 aa5.28□□□□□ -1.56
SKA3-207ENST00000536239 SERPINB4P48594 390 aa5.28□□□□□ -1.56
SKA3-207ENST00000536239 SFRP5Q5T4F7 317 aa5.28□□□□□ -1.56
SKA3-207ENST00000536239 PI16Q6UXB8 463 aa5.28□□□□□ -1.56
SKA3-207ENST00000536239 GRIN3AQ8TCU5 1115 aa5.28□□□□□ -1.56
SKA3-207ENST00000536239 KCNN1Q92952 543 aa5.28□□□□□ -1.56
SKA3-207ENST00000536239 ALKBH8Q96BT7 664 aaKnown RBP5.28□□□□□ -1.56
SKA3-207ENST00000536239 ARID3CA6NKF2 412 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 NUAK1O60285 661 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 TRIM37O94972 964 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 RAC2P15153 192 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 LINC00310P59036 64 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 THAP5Q7Z6K1 395 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 TTC6Q86TZ1 520 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 ZNF507Q8TCN5 953 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 NECAB3Q96P71 396 aaPredicted RBP5.27□□□□□ -1.57
SKA3-207ENST00000536239 SLC26A8Q96RN1 970 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 TPX2Q9ULW0 747 aaKnown RBP5.27□□□□□ -1.57
SKA3-207ENST00000536239 JAG2Q9Y219 1238 aa5.27□□□□□ -1.57
SKA3-207ENST00000536239 CAPN6Q9Y6Q1 641 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms