RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 MYH8P13535 1937 aa13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 TBC1D12O60347 775 aa13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 MKRN3Q13064 507 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 NOGQ13253 232 aa13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 RRP1BQ14684 758 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 SPRYD7Q5W111 196 aa13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 METTL16Q86W50 562 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 RILPL2Q969X0 211 aa13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 SLC10A4Q96EP9 437 aa13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 WNK4Q96J92 1243 aa13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 DHX36Q9H2U1 1008 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 PI4KBQ9UBF8 816 aa13.63□□□□□ -0.23
TNFRSF1A-208ENST00000536194 SMIM22K7EJ46 135 aa13.62□□□□□ -0.23
TNFRSF1A-208ENST00000536194 GPAA1O43292 621 aa13.62□□□□□ -0.23
TNFRSF1A-208ENST00000536194 MAP2K2P36507 400 aa13.62□□□□□ -0.23
TNFRSF1A-208ENST00000536194 PLCD1P51178 756 aa13.62□□□□□ -0.23
TNFRSF1A-208ENST00000536194 FAM227BQ96M60 508 aa13.62□□□□□ -0.23
TNFRSF1A-208ENST00000536194 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-208ENST00000536194 SLC4A4Q9Y6R1 1079 aa13.62□□□□□ -0.23
TNFRSF1A-208ENST00000536194 A0A0D9SFI3 127 aa13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 GSG1L2A8MUP6 293 aa13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 FOXP2O15409 715 aa13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CYP2D6P10635 497 aa13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 KIF23Q02241 960 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 LRRFIP1Q32MZ4 808 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 NOL9Q5SY16 702 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CCDC129Q6ZRS4 1044 aa13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 OPTNQ96CV9 577 aa13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.61□□□□□ -0.232e-7■■■□□ 17.4
TNFRSF1A-208ENST00000536194 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 ATP8A2Q9NTI2 1148 aa13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CSADQ9Y600 493 aa13.61□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CYP2D7A0A087X1C5 515 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 SPDYE5A6NIY4 337 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 HLA-DOAP06340 250 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 SDSP20132 328 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 JAG1P78504 1218 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 GABPAQ06546 454 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 NMIQ13287 307 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 ERICH6BQ5W0A0 696 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 WBP1LQ9NX94 342 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 MCM9Q9NXL9 1143 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 PCNTO95613 3336 aa13.6□□□□□ -0.23
TNFRSF1A-208ENST00000536194 USP17L12C9JPN9 530 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 USP17L21D6R901 530 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CTNND1O60716 968 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 HSPA1AP0DMV8 641 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 HSPA1BP0DMV9 641 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 ZBTB48P10074 688 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CTR9Q6PD62 1173 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 ZNF589Q86UQ0 364 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CCDC84Q86UT8 332 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 ERO1BQ86YB8 467 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 SCYL3Q8IZE3 742 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 MS4A4AQ96JQ5 239 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 EHD4Q9H223 541 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 PPP4R2Q9NY27 417 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 SERPINB13Q9UIV8 391 aa13.59□□□□□ -0.23
TNFRSF1A-208ENST00000536194 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 PTPRAP18433 802 aa13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 SHMT1P34896 483 aa13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 CAP2P40123 477 aa13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 C12orf60Q5U649 245 aa13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 TTC6Q86TZ1 520 aa13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 SLC44A5Q8NCS7 719 aa13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 DYNLL2Q96FJ2 89 aa13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 IL25Q9H293 177 aa13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 HELLSQ9NRZ9 838 aa13.58□□□□□ -0.24
TNFRSF1A-208ENST00000536194 IRF6O14896 467 aa13.57□□□□□ -0.24
TNFRSF1A-208ENST00000536194 GNAT2P19087 354 aa13.57□□□□□ -0.24
TNFRSF1A-208ENST00000536194 MAP2K1Q02750 393 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-208ENST00000536194 PPIL2Q13356 520 aa13.57□□□□□ -0.24
TNFRSF1A-208ENST00000536194 MCMDC2Q4G0Z9 681 aa13.57□□□□□ -0.24
TNFRSF1A-208ENST00000536194 VPS53Q5VIR6 699 aa13.57□□□□□ -0.24
TNFRSF1A-208ENST00000536194 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
TNFRSF1A-208ENST00000536194 GREB1LQ9C091 1923 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 LOC285556D6RIA3 1793 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 PATL2C9JE40 543 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 FOXN1O15353 648 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 GDF11O95390 407 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 TM4SF4P48230 202 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 PPATQ06203 517 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 SBK1Q52WX2 424 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 GIMAP6Q6P9H5 292 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 IFNL3Q8IZI9 196 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 PTPN18Q99952 460 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 TRIM34Q9BYJ4 488 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 ROBO3Q96MS0 1386 aa13.56□□□□□ -0.24
TNFRSF1A-208ENST00000536194 LAMA4Q16363 1823 aa13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 TESPA1A2RU30 521 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 MANSC4A6NHS7 340 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-208ENST00000536194 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms