RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 COL2A1P02458 1487 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 FAM196BA6NMK8 535 aa15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 GCLCP48506 637 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 G3BP1Q13283 466 aaKnown RBP eCLIP15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 TREML2Q5T2D2 321 aa15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 TEX11Q8IYF3 940 aa15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 ZNF280CQ8ND82 737 aa15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 HMG20BQ9P0W2 317 aa15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 LRP2BPQ9P2M1 347 aa15.97■□□□□ 0.15
TNFRSF1A-207ENST00000535958 ATAD5Q96QE3 1844 aa15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 GNAI2P04899 355 aa15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 SLURP2P0DP57 97 aa15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 RHBDL3P58872 404 aa15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 SPP2Q13103 211 aa15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 UBE2Q1Q7Z7E8 422 aa15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 ARHGAP45Q92619 1136 aa15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 NSUN4Q96CB9 384 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 HERC5Q9UII4 1024 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-207ENST00000535958 LOC285556D6RIA3 1793 aa15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 USP17L5A8MUK1 530 aa15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 BAG3O95817 575 aa15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 UQCRFS1P1P0C7P4 283 aa15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 HMGCS2P54868 508 aa15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 IRX3P78415 501 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 OS9Q13438 667 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 MTX1Q13505 466 aa15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 TRMT2AQ8IZ69 625 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-207ENST00000535958 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 HMGCRP04035 888 aa15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 PLCG2P16885 1265 aa15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 ARID4AP29374 1257 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 CAP2P40123 477 aa15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 TTC39AQ5SRH9 613 aa15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 PI16Q6UXB8 463 aa15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 TBC1D9Q6ZT07 1266 aa15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 NECAB2Q7Z6G3 386 aa15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 CRACR2BQ8N4Y2 399 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 FRAT1Q92837 279 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 DHX36Q9H2U1 1008 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 TMOD4Q9NZQ9 345 aa15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 MAST2Q6P0Q8 1798 aa15.94■□□□□ 0.14
TNFRSF1A-207ENST00000535958 CCDC158Q5M9N0 1113 aa15.93■□□□□ 0.14
TNFRSF1A-207ENST00000535958 NAA16Q6N069 864 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF1A-207ENST00000535958 CCAR1Q8IX12 1150 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-207ENST00000535958 ASCC2Q9H1I8 757 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF1A-207ENST00000535958 PAK6Q9NQU5 681 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF1A-207ENST00000535958 PI4KBQ9UBF8 816 aa15.93■□□□□ 0.14
TNFRSF1A-207ENST00000535958 A0A1W2PPC1 479 aa15.92■□□□□ 0.14
TNFRSF1A-207ENST00000535958 ASNSP08243 561 aa15.92■□□□□ 0.14
TNFRSF1A-207ENST00000535958 MCAMP43121 646 aa15.92■□□□□ 0.14
TNFRSF1A-207ENST00000535958 ANKLE1Q8NAG6 615 aa15.92■□□□□ 0.14
TNFRSF1A-207ENST00000535958 SH3RF3Q8TEJ3 882 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-207ENST00000535958 PAWRQ96IZ0 340 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-207ENST00000535958 CWC22Q9HCG8 908 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-207ENST00000535958 HMX1Q9NP08 348 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-207ENST00000535958 AATFQ9NY61 560 aaKnown RBP eCLIP15.92■□□□□ 0.14
TNFRSF1A-207ENST00000535958 HLA-DOAP06340 250 aa15.91■□□□□ 0.14
TNFRSF1A-207ENST00000535958 MTMR2Q13614 643 aa15.91■□□□□ 0.14
TNFRSF1A-207ENST00000535958 PDE3AQ14432 1141 aa15.91■□□□□ 0.14
TNFRSF1A-207ENST00000535958 ZNF384Q8TF68 577 aa15.91■□□□□ 0.14
TNFRSF1A-207ENST00000535958 TRIM27P14373 513 aa15.9■□□□□ 0.14
TNFRSF1A-207ENST00000535958 SH3D19Q5HYK7 790 aa15.9■□□□□ 0.14
TNFRSF1A-207ENST00000535958 ATF7IPQ6VMQ6 1270 aa15.9■□□□□ 0.14
TNFRSF1A-207ENST00000535958 MAPKAPK5Q8IW41 473 aa15.9■□□□□ 0.14
TNFRSF1A-207ENST00000535958 CRISPLD2Q9H0B8 497 aa15.9■□□□□ 0.14
TNFRSF1A-207ENST00000535958 RPTORQ8N122 1335 aa15.9■□□□□ 0.14
TNFRSF1A-207ENST00000535958 BACE1P56817 501 aa15.89■□□□□ 0.13
TNFRSF1A-207ENST00000535958 C7orf61Q8IZ16 206 aa15.89■□□□□ 0.13
TNFRSF1A-207ENST00000535958 TGFBRAP1Q8WUH2 860 aa15.89■□□□□ 0.13
TNFRSF1A-207ENST00000535958 SOCS4Q8WXH5 440 aa15.89■□□□□ 0.13
TNFRSF1A-207ENST00000535958 CLUAP1Q96AJ1 413 aa15.89■□□□□ 0.13
TNFRSF1A-207ENST00000535958 NBPF3Q9H094 633 aa15.89■□□□□ 0.13
TNFRSF1A-207ENST00000535958 SNRKQ9NRH2 765 aa15.89■□□□□ 0.13
TNFRSF1A-207ENST00000535958 FLT1P17948 1338 aa15.89■□□□□ 0.13
TNFRSF1A-207ENST00000535958 PNMA6EA0A0J9YXQ4 647 aa15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 C19orf81C9J6K1 198 aa15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 CYP2B6P20813 491 aa15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 GTF3C2Q8WUA4 911 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 NUDT12Q9BQG2 462 aa15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 WDR18Q9BV38 432 aa15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 GINM1Q9NU53 330 aa15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 MORF4L1Q9UBU8 362 aa15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 DOCK3Q8IZD9 2030 aa15.88■□□□□ 0.13
TNFRSF1A-207ENST00000535958 USP17L10C9JJH3 530 aa15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 GDF11O95390 407 aa15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 ZKSCAN1P17029 563 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 HERVK_113P62684 666 aa15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 TNNI3KQ59H18 835 aa15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 FOXP4Q8IVH2 680 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 TRMT44Q8IYL2 757 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 GPRC5AQ8NFJ5 357 aa15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 DIS3LQ8TF46 1054 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 PRO3102Q9H379 93 aa15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 C11orf49Q9H6J7 331 aa15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 GPR108Q9NPR9 543 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms