RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 DCP1AQ9NPI6 582 aaPredicted RBP7.7□□□□□ -1.18
CDCA3-205ENST00000535871 TRPC6Q9Y210 931 aa7.7□□□□□ -1.18
CDCA3-205ENST00000535871 DAGLAQ9Y4D2 1042 aa7.7□□□□□ -1.18
CDCA3-205ENST00000535871 CYP46A1Q9Y6A2 500 aa7.7□□□□□ -1.18
CDCA3-205ENST00000535871 SLC4A4Q9Y6R1 1079 aa7.7□□□□□ -1.18
CDCA3-205ENST00000535871 FOCADQ5VW36 1801 aa7.7□□□□□ -1.18
CDCA3-205ENST00000535871 SBF1O95248 1867 aa7.7□□□□□ -1.18
CDCA3-205ENST00000535871 PSMD14O00487 310 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 ENTPD3O75355 529 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 APPP05067 770 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 BTDP43251 543 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 TDO2P48775 406 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 HIC1Q14526 733 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 AKNAD1Q5T1N1 836 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 BLOC1S2Q6QNY1 142 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 CCDC129Q6ZRS4 1044 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
CDCA3-205ENST00000535871 TTC6Q86TZ1 520 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 SLC51AQ86UW1 340 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 FAM83AQ86UY5 434 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 METTL16Q86W50 562 aaKnown RBP7.69□□□□□ -1.18
CDCA3-205ENST00000535871 TMTC2Q8N394 836 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 CCDC82Q8N4S0 544 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 RGS22Q8NE09 1264 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 NCOA7Q8NI08 942 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 MS4A3Q96HJ5 214 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 INTS4Q96HW7 963 aaKnown RBP7.69□□□□□ -1.18
CDCA3-205ENST00000535871 ZBED3Q96IU2 234 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-205ENST00000535871 TMEM87BQ96K49 555 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 ZSCAN31Q96LW9 406 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-205ENST00000535871 TTC14Q96N46 770 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 ARMT1Q9H993 441 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 EPB41L4AQ9HCS5 686 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-205ENST00000535871 SH2B1Q9NRF2 756 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-205ENST00000535871 AATFQ9NY61 560 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDCA3-205ENST00000535871 ATRNL1Q5VV63 1379 aa7.69□□□□□ -1.18
CDCA3-205ENST00000535871 GOLGB1Q14789 3259 aaKnown RBP7.69□□□□□ -1.18
CDCA3-205ENST00000535871 COL4A5P29400 1685 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 A6NJR5 290 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 MYO1BO43795 1136 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 WDHD1O75717 1129 aaPredicted RBP7.68□□□□□ -1.18
CDCA3-205ENST00000535871 RPS6KB1P23443 525 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 MCM5P33992 734 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 LIFRP42702 1097 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 NEK4P51957 841 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 EXOSC10Q01780 885 aaKnown RBP7.68□□□□□ -1.18
CDCA3-205ENST00000535871 PDE4BQ07343 736 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 TNFAIP1Q13829 316 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 SART3Q15020 963 aaKnown RBP7.68□□□□□ -1.18
CDCA3-205ENST00000535871 PPP2R5BQ15173 497 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 DIXDC1Q155Q3 683 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 C12orf60Q5U649 245 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 MFSD6Q6ZSS7 791 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 RALYLQ86SE5 291 aaKnown RBP7.68□□□□□ -1.18
CDCA3-205ENST00000535871 HSCBQ8IWL3 235 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 PLPP6Q8IY26 295 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 TEX11Q8IYF3 940 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 MIGA1Q8NAN2 632 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 L3MBTL3Q96JM7 780 aaPredicted RBP7.68□□□□□ -1.18
CDCA3-205ENST00000535871 TMOD2Q9NZR1 351 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 SWAP70Q9UH65 585 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 PALD1Q9ULE6 856 aa7.68□□□□□ -1.18
CDCA3-205ENST00000535871 DDX60LQ5H9U9 1706 aaKnown RBP7.68□□□□□ -1.18
CDCA3-205ENST00000535871 USP17L12C9JPN9 530 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 USP17L21D6R901 530 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 E7EWF7 191 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 K7ELQ4 463 aaPredicted RBP7.67□□□□□ -1.18
CDCA3-205ENST00000535871 TRAK2O60296 914 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 CHGBP05060 677 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 CASTP20810 708 aaKnown RBP7.67□□□□□ -1.18
CDCA3-205ENST00000535871 USP5P45974 858 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 PPARAQ07869 468 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 DLGAP5Q15398 846 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 GRIK5Q16478 980 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 CDC42EP5Q6NZY7 148 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 CTR9Q6PD62 1173 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 ARHGAP27Q6ZUM4 889 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 KIAA0825Q8IV33 1275 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 FOXP4Q8IVH2 680 aaPredicted RBP7.67□□□□□ -1.18
CDCA3-205ENST00000535871 MICALL2Q8IY33 904 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 ESR2Q92731 530 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 HOOK2Q96ED9 719 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 ZNF274Q96GC6 653 aaPredicted RBP7.67□□□□□ -1.18
CDCA3-205ENST00000535871 CCDC17Q96LX7 622 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 JAKMIP1Q96N16 626 aaKnown RBP7.67□□□□□ -1.18
CDCA3-205ENST00000535871 CWC22Q9HCG8 908 aaKnown RBP7.67□□□□□ -1.18
CDCA3-205ENST00000535871 GINM1Q9NU53 330 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 TCP11L1Q9NUJ3 509 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 SYNPO2Q9UMS6 1093 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 LIMCH1Q9UPQ0 1083 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDCA3-205ENST00000535871 FLT1P17948 1338 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 PITPNM2Q9BZ72 1349 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 PLIN4Q96Q06 1357 aa7.67□□□□□ -1.18
CDCA3-205ENST00000535871 LAMB1P07942 1786 aa7.66□□□□□ -1.18
CDCA3-205ENST00000535871 ECM29Q5VYK3 1845 aa7.66□□□□□ -1.18
CDCA3-205ENST00000535871 H7C1D1 291 aa7.66□□□□□ -1.18
CDCA3-205ENST00000535871 TBC1D12O60347 775 aa7.66□□□□□ -1.18
CDCA3-205ENST00000535871 RAD17O75943 681 aa7.66□□□□□ -1.18
CDCA3-205ENST00000535871 HLA-DOAP06340 250 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms