RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-206ENST00000535668 LOC285556D6RIA3 1793 aa13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 CAP2P40123 477 aa13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 FLT3LGP49771 235 aa13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 ZNF280CQ8ND82 737 aa13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 SSH3Q8TE77 659 aa13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 U2AF1L4Q8WU68 220 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 HTATIP2Q9BUP3 242 aa13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 MORF4L1Q9UBU8 362 aa13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 CUL9Q8IWT3 2517 aa13.84□□□□□ -0.19
CLSTN3-206ENST00000535668 ADCY3O60266 1144 aa13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 PLCG2P16885 1265 aa13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 MCAMP43121 646 aa13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 PABPC4Q13310 644 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 ANKLE1Q8NAG6 615 aa13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 RNF208Q9H0X6 261 aa13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 GJD2Q9UKL4 321 aa13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 GABRQQ9UN88 632 aa13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 NOP58Q9Y2X3 529 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-206ENST00000535668 CERS3Q8IU89 383 aa13.82□□□□□ -0.2
CLSTN3-206ENST00000535668 FOXP4Q8IVH2 680 aaPredicted RBP13.82□□□□□ -0.2
CLSTN3-206ENST00000535668 ZSCAN29Q8IWY8 852 aaPredicted RBP13.82□□□□□ -0.2
CLSTN3-206ENST00000535668 PNMA6EA0A0J9YXQ4 647 aa13.81□□□□□ -0.2
CLSTN3-206ENST00000535668 USP17L5A8MUK1 530 aa13.81□□□□□ -0.2
CLSTN3-206ENST00000535668 XRCC5P13010 732 aaKnown RBP13.81□□□□□ -0.2
CLSTN3-206ENST00000535668 SMCR8Q8TEV9 937 aaPredicted RBP13.81□□□□□ -0.2
CLSTN3-206ENST00000535668 COA7Q96BR5 231 aa13.81□□□□□ -0.2
CLSTN3-206ENST00000535668 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.81□□□□□ -0.22e-6■■■□□ 18.4
CLSTN3-206ENST00000535668 NR2E3Q9Y5X4 410 aa13.81□□□□□ -0.2
CLSTN3-206ENST00000535668 TRIM75PA6NK02 468 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 C19orf81C9J6K1 198 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 TNPO2O14787 897 aaKnown RBP13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 ZBTB7BO15156 539 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 BAG3O95817 575 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 ASNSP08243 561 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 BACE1P56817 501 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 ATP8B2P98198 1209 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 SPP2Q13103 211 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 RRP1BQ14684 758 aaKnown RBP13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 UNC93B1Q9H1C4 597 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 AS3MTQ9HBK9 375 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
CLSTN3-206ENST00000535668 SIPA1L1O43166 1804 aa13.79□□□□□ -0.2
CLSTN3-206ENST00000535668 FARP2O94887 1054 aaPredicted RBP13.79□□□□□ -0.2
CLSTN3-206ENST00000535668 INHAP05111 366 aa13.79□□□□□ -0.2
CLSTN3-206ENST00000535668 PICALMQ13492 652 aa13.79□□□□□ -0.2
CLSTN3-206ENST00000535668 MAP3K21Q5TCX8 1036 aa13.79□□□□□ -0.2
CLSTN3-206ENST00000535668 PI16Q6UXB8 463 aa13.79□□□□□ -0.2
CLSTN3-206ENST00000535668 GADL1Q6ZQY3 521 aa13.79□□□□□ -0.2
CLSTN3-206ENST00000535668 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
CLSTN3-206ENST00000535668 NEUROD6Q96NK8 337 aa13.79□□□□□ -0.2
CLSTN3-206ENST00000535668 FOCADQ5VW36 1801 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 HMGCRP04035 888 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 CYP2E1P05181 493 aaPredicted RBP13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 BMP8BP34820 402 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 TNNI3KQ59H18 835 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 GPR153Q6NV75 609 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 TBC1D9Q6ZT07 1266 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 TEX11Q8IYF3 940 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 USP6NLQ92738 828 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 ASCC2Q9H1I8 757 aaPredicted RBP13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 DNAJC18Q9H819 358 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 FPGT-TNNI3KV9GXZ4 949 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 RPTORQ8N122 1335 aa13.78□□□□□ -0.2
CLSTN3-206ENST00000535668 CCDC158Q5M9N0 1113 aa13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 GORABQ5T7V8 394 aa13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 MAST2Q6P0Q8 1798 aa13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 C12orf42Q96LP6 360 aa13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 EHD4Q9H223 541 aa13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 RAI14Q9P0K7 980 aa13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 LRP2BPQ9P2M1 347 aa13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 RBM27Q9P2N5 1060 aaKnown RBP13.77□□□□□ -0.21
CLSTN3-206ENST00000535668 FLT1P17948 1338 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 BCAR3O75815 825 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 ELNP15502 786 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 HMGCS2P54868 508 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 ZKSCAN2Q63HK3 967 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 NAA16Q6N069 864 aaPredicted RBP13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 TATDN1Q6P1N9 297 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 LBX2Q6XYB7 198 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 SH3RF3Q8TEJ3 882 aaPredicted RBP13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 DPF3Q92784 378 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 BIN2Q9UBW5 565 aaPredicted RBP13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 OGDHLQ9ULD0 1010 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 A0A0C4DFX4 3053 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 ATAD5Q96QE3 1844 aa13.76□□□□□ -0.21
CLSTN3-206ENST00000535668 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
CLSTN3-206ENST00000535668 IGHA2P01877 340 aa13.75□□□□□ -0.21
CLSTN3-206ENST00000535668 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
CLSTN3-206ENST00000535668 ADGRA1Q86SQ6 560 aa13.75□□□□□ -0.21
CLSTN3-206ENST00000535668 SOCS4Q8WXH5 440 aa13.75□□□□□ -0.21
CLSTN3-206ENST00000535668 DEFB118Q96PH6 123 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms