RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 EHD4Q9H223 541 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 SERPINB13Q9UIV8 391 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 DDX60LQ5H9U9 1706 aaKnown RBP18.53■□□□□ 0.56
CNN1-202ENST00000535659 SMIM22K7EJ46 135 aa18.53■□□□□ 0.56
CNN1-202ENST00000535659 TRAF5O00463 557 aa18.53■□□□□ 0.56
CNN1-202ENST00000535659 TBC1D12O60347 775 aa18.53■□□□□ 0.56
CNN1-202ENST00000535659 EVX2Q03828 476 aa18.53■□□□□ 0.56
CNN1-202ENST00000535659 MIGA2Q7L4E1 593 aa18.53■□□□□ 0.56
CNN1-202ENST00000535659 SLC3A2P08195 630 aaKnown RBP18.52■□□□□ 0.56
CNN1-202ENST00000535659 NF2P35240 595 aa18.52■□□□□ 0.56
CNN1-202ENST00000535659 APLP1P51693 650 aa18.52■□□□□ 0.56
CNN1-202ENST00000535659 HAND2P61296 217 aa18.52■□□□□ 0.56
CNN1-202ENST00000535659 CTDSPL2Q05D32 466 aa18.52■□□□□ 0.56
CNN1-202ENST00000535659 CRACR2BQ8N4Y2 399 aaPredicted RBP18.52■□□□□ 0.56
CNN1-202ENST00000535659 DYNLL2Q96FJ2 89 aa18.52■□□□□ 0.56
CNN1-202ENST00000535659 HERC5Q9UII4 1024 aaKnown RBP18.52■□□□□ 0.56
CNN1-202ENST00000535659 TAOK2Q9UL54 1235 aa18.52■□□□□ 0.56
CNN1-202ENST00000535659 CYP21A2P08686 494 aa18.51■□□□□ 0.55
CNN1-202ENST00000535659 GABPAQ06546 454 aa18.51■□□□□ 0.55
CNN1-202ENST00000535659 FMR1Q06787 632 aaKnown RBP eCLIP18.51■□□□□ 0.55
CNN1-202ENST00000535659 TRIM34Q9BYJ4 488 aa18.51■□□□□ 0.55
CNN1-202ENST00000535659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.51■□□□□ 0.55
CNN1-202ENST00000535659 MYH1P12882 1939 aa18.51■□□□□ 0.55
CNN1-202ENST00000535659 BAZ2AQ9UIF9 1905 aaKnown RBP18.51■□□□□ 0.55
CNN1-202ENST00000535659 SLC27A2O14975 620 aa18.5■□□□□ 0.55
CNN1-202ENST00000535659 SLURP2P0DP57 97 aa18.5■□□□□ 0.55
CNN1-202ENST00000535659 HSPA4P34932 840 aa18.5■□□□□ 0.55
CNN1-202ENST00000535659 RNF20Q5VTR2 975 aa18.5■□□□□ 0.55
CNN1-202ENST00000535659 DCAF15Q66K64 600 aa18.5■□□□□ 0.55
CNN1-202ENST00000535659 CREB3L3Q68CJ9 461 aa18.5■□□□□ 0.55
CNN1-202ENST00000535659 C16orf86Q6ZW13 317 aa18.5■□□□□ 0.55
CNN1-202ENST00000535659 STK11IPQ8N1F8 1099 aa18.5■□□□□ 0.55
CNN1-202ENST00000535659 PPP1R12BO60237 982 aaPredicted RBP18.49■□□□□ 0.55
CNN1-202ENST00000535659 CDK8P49336 464 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 PDE4BQ07343 736 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 FSTL1Q12841 308 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 DNAJC5GQ8N7S2 189 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 ZNF287Q9HBT7 754 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 FAM196BA6NMK8 535 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 USP2O75604 605 aaPredicted RBP18.49■□□□□ 0.55
CNN1-202ENST00000535659 FGRP09769 529 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 MCCP23508 829 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 AKNAD1Q5T1N1 836 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 MFSD6Q6ZSS7 791 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 KCNB2Q92953 911 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 ZNF341Q9BYN7 854 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 NBPF3Q9H094 633 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 RNF41Q9H4P4 317 aaPredicted RBP18.49■□□□□ 0.55
CNN1-202ENST00000535659 DNAJC18Q9H819 358 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 INCENPQ9NQS7 918 aa18.49■□□□□ 0.55
CNN1-202ENST00000535659 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
CNN1-202ENST00000535659 PRKG1Q13976 671 aa18.48■□□□□ 0.55
CNN1-202ENST00000535659 TATDN1Q6P1N9 297 aa18.48■□□□□ 0.55
CNN1-202ENST00000535659 SLC44A5Q8NCS7 719 aa18.48■□□□□ 0.55
CNN1-202ENST00000535659 ZNF408Q9H9D4 720 aa18.48■□□□□ 0.55
CNN1-202ENST00000535659 MKNK2Q9HBH9 465 aa18.48■□□□□ 0.55
CNN1-202ENST00000535659 TACC3Q9Y6A5 838 aa18.48■□□□□ 0.55
CNN1-202ENST00000535659 ROBO3Q96MS0 1386 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 LAMB1P07942 1786 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 PASKQ96RG2 1323 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 SSC5DA1L4H1 1573 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
CNN1-202ENST00000535659 SHMT1P34896 483 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 TSGA10IPQ3SY00 556 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 TBC1D10CQ8IV04 446 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 RASEFQ8IZ41 740 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 STAG1Q8WVM7 1258 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 UPF2Q9HAU5 1272 aaKnown RBP18.47■□□□□ 0.55
CNN1-202ENST00000535659 ZNF112Q9UJU3 913 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 FZD1Q9UP38 647 aa18.47■□□□□ 0.55
CNN1-202ENST00000535659 SIPA1L1O43166 1804 aa18.46■□□□□ 0.55
CNN1-202ENST00000535659 PHF20L1A8MW92 1017 aa18.46■□□□□ 0.55
CNN1-202ENST00000535659 E7EWF7 191 aa18.46■□□□□ 0.55
CNN1-202ENST00000535659 CELF2O95319 508 aaKnown RBP18.46■□□□□ 0.55
CNN1-202ENST00000535659 CST9Q5W186 159 aa18.46■□□□□ 0.55
CNN1-202ENST00000535659 ZNF444Q8N0Y2 327 aaPredicted RBP18.46■□□□□ 0.55
CNN1-202ENST00000535659 KLRG1Q96E93 195 aa18.46■□□□□ 0.55
CNN1-202ENST00000535659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.46■□□□□ 0.55
CNN1-202ENST00000535659 TAF6LQ9Y6J9 622 aa18.46■□□□□ 0.55
CNN1-202ENST00000535659 ORC4O43929 436 aa18.45■□□□□ 0.54
CNN1-202ENST00000535659 PRDM1O75626 825 aa18.45■□□□□ 0.54
CNN1-202ENST00000535659 TTLL12Q14166 644 aaPredicted RBP18.45■□□□□ 0.54
CNN1-202ENST00000535659 CERKLQ49MI3 558 aaPredicted RBP18.45■□□□□ 0.54
CNN1-202ENST00000535659 ARMC9Q7Z3E5 817 aa18.45■□□□□ 0.54
CNN1-202ENST00000535659 C2orf69Q8N8R5 385 aa18.45■□□□□ 0.54
CNN1-202ENST00000535659 TOMM22Q9NS69 142 aa18.45■□□□□ 0.54
CNN1-202ENST00000535659 ANGEL1Q9UNK9 670 aaKnown RBP18.45■□□□□ 0.54
CNN1-202ENST00000535659 SNX14Q9Y5W7 946 aa18.45■□□□□ 0.54
CNN1-202ENST00000535659 LAMA4Q16363 1823 aa18.45■□□□□ 0.54
CNN1-202ENST00000535659 IREB2P48200 963 aaKnown RBP18.44■□□□□ 0.54
CNN1-202ENST00000535659 FKBP1BP68106 108 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 TRDNQ13061 729 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 RRP1BQ14684 758 aaKnown RBP18.44■□□□□ 0.54
CNN1-202ENST00000535659 MAP3K11Q16584 847 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 CCDC17Q96LX7 622 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 CNNM2Q9H8M5 875 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 GBA2Q9HCG7 927 aaPredicted RBP18.44■□□□□ 0.54
CNN1-202ENST00000535659 CTNND1O60716 968 aaKnown RBP18.44■□□□□ 0.54
CNN1-202ENST00000535659 RASA1P20936 1047 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms