RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 MYH2Q9UKX2 1941 aa13.6□□□□□ -0.23
VAMP1-204ENST00000535180 BMP1P13497 986 aa13.59□□□□□ -0.23
VAMP1-204ENST00000535180 CCL14Q16627 93 aa13.59□□□□□ -0.23
VAMP1-204ENST00000535180 SLC39A5Q6ZMH5 540 aa13.59□□□□□ -0.23
VAMP1-204ENST00000535180 ZFPM1Q8IX07 1006 aa13.59□□□□□ -0.23
VAMP1-204ENST00000535180 LPAR1Q92633 364 aa13.59□□□□□ -0.23
VAMP1-204ENST00000535180 PCGF6Q9BYE7 350 aa13.59□□□□□ -0.23
VAMP1-204ENST00000535180 ASCC2Q9H1I8 757 aaPredicted RBP13.59□□□□□ -0.23
VAMP1-204ENST00000535180 TRIM43BA6NCK2 446 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 MSCO60682 206 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 RGS2P41220 211 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 GNAI1P63096 354 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-204ENST00000535180 CAVIN4Q5BKX8 364 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 LMBR1LQ6UX01 489 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 TRIM43Q96BQ3 446 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-204ENST00000535180 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 TIFAQ96CG3 184 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 PDLIM7Q9NR12 457 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 IFT57Q9NWB7 429 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-204ENST00000535180 DAGLAQ9Y4D2 1042 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.24
VAMP1-204ENST00000535180 CACNA1AO00555 2505 aa13.57□□□□□ -0.24
VAMP1-204ENST00000535180 GBF1Q92538 1859 aa13.57□□□□□ -0.24
VAMP1-204ENST00000535180 SNX17Q15036 470 aa13.57□□□□□ -0.24
VAMP1-204ENST00000535180 CCDC85BQ15834 202 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-204ENST00000535180 G2E3Q7L622 706 aa13.57□□□□□ -0.24
VAMP1-204ENST00000535180 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
VAMP1-204ENST00000535180 CCDC84Q86UT8 332 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-204ENST00000535180 P2RX7Q99572 595 aaKnown RBP13.57□□□□□ -0.24
VAMP1-204ENST00000535180 CXXC1Q9P0U4 656 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-204ENST00000535180 DDX20Q9UHI6 824 aaKnown RBP13.57□□□□□ -0.24
VAMP1-204ENST00000535180 XIRP2A4UGR9 3374 aa13.57□□□□□ -0.24
VAMP1-204ENST00000535180 GPR37L1O60883 481 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 MAPK4P31152 587 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 EPHB4P54760 987 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 SPP2Q13103 211 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 MORN1Q5T089 497 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 GPRC5AQ8NFJ5 357 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 APBA2Q99767 749 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 STK31Q9BXU1 1019 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 PRDM12Q9H4Q4 367 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 USP40Q9NVE5 1235 aa13.56□□□□□ -0.24
VAMP1-204ENST00000535180 ENTPD3O75355 529 aa13.55□□□□□ -0.24
VAMP1-204ENST00000535180 MRE11P49959 708 aa13.55□□□□□ -0.24
VAMP1-204ENST00000535180 HMGCS2P54868 508 aa13.55□□□□□ -0.24
VAMP1-204ENST00000535180 TRIM60Q495X7 471 aa13.55□□□□□ -0.24
VAMP1-204ENST00000535180 EPHA10Q5JZY3 1008 aa13.55□□□□□ -0.24
VAMP1-204ENST00000535180 C1orf53Q5VUE5 145 aa13.55□□□□□ -0.24
VAMP1-204ENST00000535180 ZNF280CQ8ND82 737 aa13.55□□□□□ -0.24
VAMP1-204ENST00000535180 PUS3Q9BZE2 481 aaKnown RBP13.55□□□□□ -0.24
VAMP1-204ENST00000535180 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-204ENST00000535180 PEX10O60683 326 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 ITGB8P26012 769 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 RGS3P49796 1198 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 ADGRE1Q14246 886 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 GJC2Q5T442 439 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-204ENST00000535180 SH3BP5LQ7L8J4 393 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 GPR142Q7Z601 462 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 TSPYL6Q8N831 410 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 ARRDC4Q8NCT1 418 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 DNAAF4Q8WXU2 420 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 IDI2Q9BXS1 227 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 TBC1D2Q9BYX2 928 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 TXNRD2Q9NNW7 524 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 C11orf16Q9NQ32 467 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 UTYO14607 1347 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 MROH5Q6ZUA9 1318 aa13.54□□□□□ -0.24
VAMP1-204ENST00000535180 SMCHD1A6NHR9 2005 aa13.53□□□□□ -0.24
VAMP1-204ENST00000535180 SLURP2P0DP57 97 aa13.53□□□□□ -0.24
VAMP1-204ENST00000535180 CNGA1P29973 690 aa13.53□□□□□ -0.24
VAMP1-204ENST00000535180 AAK1Q2M2I8 961 aa13.53□□□□□ -0.24
VAMP1-204ENST00000535180 SH3D19Q5HYK7 790 aa13.53□□□□□ -0.24
VAMP1-204ENST00000535180 MFSD14CQ5VZR4 134 aa13.53□□□□□ -0.24
VAMP1-204ENST00000535180 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
VAMP1-204ENST00000535180 WDR66Q8TBY9 1149 aa13.53□□□□□ -0.24
VAMP1-204ENST00000535180 TACC3Q9Y6A5 838 aa13.53□□□□□ -0.24
VAMP1-204ENST00000535180 DDTLA6NHG4 134 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-204ENST00000535180 KBTBD13C9JR72 458 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 IGFBP4P22692 258 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 IRX3P78415 501 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-204ENST00000535180 FPGSQ05932 587 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 Q3C1V9 767 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 PLEKHH3Q7Z736 793 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 CCAR1Q8IX12 1150 aaKnown RBP13.52□□□□□ -0.25
VAMP1-204ENST00000535180 EDC3Q96F86 508 aaKnown RBP13.52□□□□□ -0.25
VAMP1-204ENST00000535180 PORCNQ9H237 461 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 FLRT1Q9NZU1 646 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 RBPJLQ9UBG7 517 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 CHD7Q9P2D1 2997 aa13.52□□□□□ -0.25
VAMP1-204ENST00000535180 LRRC37A2A6NM11 1700 aa13.51□□□□□ -0.25
VAMP1-204ENST00000535180 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
VAMP1-204ENST00000535180 HOXA7P31268 230 aaPredicted RBP13.51□□□□□ -0.25
VAMP1-204ENST00000535180 KCNQ1P51787 676 aa13.51□□□□□ -0.25
VAMP1-204ENST00000535180 HERVK_113P62684 666 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms