RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 MYO3BQ8WXR4 1341 aa23.92■■□□□ 1.42
TNFRSF1A-205ENST00000534885 LTBP3Q9NS15 1303 aa23.92■■□□□ 1.42
TNFRSF1A-205ENST00000534885 IFIT3O14879 490 aaKnown RBP23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 SLC3A2P08195 630 aaKnown RBP23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 PRELPP51888 382 aa23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 CXCL9Q07325 125 aa23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 TMEM67Q5HYA8 995 aa23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 AMOTL1Q8IY63 956 aa23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 JDP2Q8WYK2 163 aa23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 GMLQ99445 158 aa23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 LY9Q9HBG7 655 aa23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 RANBP6O60518 1105 aaKnown RBP23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 CCT2P78371 535 aaKnown RBP23.91■■□□□ 1.42
TNFRSF1A-205ENST00000534885 ORC4O43929 436 aa23.9■■□□□ 1.42
TNFRSF1A-205ENST00000534885 GJB2P29033 226 aa23.9■■□□□ 1.42
TNFRSF1A-205ENST00000534885 NCOA5Q9HCD5 579 aaKnown RBP23.9■■□□□ 1.42
TNFRSF1A-205ENST00000534885 PDE4BQ07343 736 aa23.9■■□□□ 1.42
TNFRSF1A-205ENST00000534885 RAB11FIP4Q86YS3 637 aa23.9■■□□□ 1.42
TNFRSF1A-205ENST00000534885 GOLGA8BA8MQT2 603 aa23.89■■□□□ 1.41
TNFRSF1A-205ENST00000534885 NUCB2P80303 420 aa23.89■■□□□ 1.41
TNFRSF1A-205ENST00000534885 NFIAQ12857 509 aa23.89■■□□□ 1.41
TNFRSF1A-205ENST00000534885 CFAP100Q494V2 611 aa23.89■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SLC44A5Q8NCS7 719 aa23.89■■□□□ 1.41
TNFRSF1A-205ENST00000534885 HPS5Q9UPZ3 1129 aa23.89■■□□□ 1.41
TNFRSF1A-205ENST00000534885 CACNB3P54284 484 aa23.88■■□□□ 1.41
TNFRSF1A-205ENST00000534885 ZDHHC9Q9Y397 364 aa23.88■■□□□ 1.41
TNFRSF1A-205ENST00000534885 LIFRP42702 1097 aa23.88■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SART3Q15020 963 aaKnown RBP23.88■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SGMS1Q86VZ5 419 aa23.88■■□□□ 1.41
TNFRSF1A-205ENST00000534885 TNPO1Q92973 898 aaKnown RBP23.88■■□□□ 1.41
TNFRSF1A-205ENST00000534885 UBAC1Q9BSL1 405 aa23.88■■□□□ 1.41
TNFRSF1A-205ENST00000534885 JAK2O60674 1132 aa23.87■■□□□ 1.41
TNFRSF1A-205ENST00000534885 FAM47AQ5JRC9 791 aa23.87■■□□□ 1.41
TNFRSF1A-205ENST00000534885 APOA5Q6Q788 366 aa23.87■■□□□ 1.41
TNFRSF1A-205ENST00000534885 NFKBIBQ15653 356 aa23.87■■□□□ 1.41
TNFRSF1A-205ENST00000534885 CIAPIN1Q6FI81 312 aa23.87■■□□□ 1.41
TNFRSF1A-205ENST00000534885 NFXL1Q6ZNB6 911 aa23.87■■□□□ 1.41
TNFRSF1A-205ENST00000534885 PRMT6Q96LA8 375 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF1A-205ENST00000534885 MTA3Q9BTC8 594 aa23.87■■□□□ 1.41
TNFRSF1A-205ENST00000534885 TNKSO95271 1327 aa23.86■■□□□ 1.41
TNFRSF1A-205ENST00000534885 ERICH2A1L162 156 aa23.86■■□□□ 1.41
TNFRSF1A-205ENST00000534885 CTDNEP1O95476 244 aa23.86■■□□□ 1.41
TNFRSF1A-205ENST00000534885 WTAPQ15007 396 aa23.86■■□□□ 1.41
TNFRSF1A-205ENST00000534885 OSBPL5Q9H0X9 879 aaPredicted RBP23.86■■□□□ 1.41
TNFRSF1A-205ENST00000534885 RXRAP19793 462 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SEC23AQ15436 765 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 AGBL3Q8NEM8 1001 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 ZSCAN10Q96SZ4 725 aaPredicted RBP23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SYT17Q9BSW7 474 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 TDRD3Q9H7E2 651 aaKnown RBP23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 NBR1Q14596 966 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 C16orf86Q6ZW13 317 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 IQCA1Q86XH1 822 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 OGFOD1Q8N543 542 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 ENAHQ8N8S7 591 aaPredicted RBP23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 MYL10Q9BUA6 226 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 MKNK2Q9HBH9 465 aa23.85■■□□□ 1.41
TNFRSF1A-205ENST00000534885 TSPY2A6NKD2 308 aa23.84■■□□□ 1.41
TNFRSF1A-205ENST00000534885 NMT2O60551 498 aa23.84■■□□□ 1.41
TNFRSF1A-205ENST00000534885 FOXD4L5Q5VV16 416 aaPredicted RBP23.84■■□□□ 1.41
TNFRSF1A-205ENST00000534885 MICU3Q86XE3 530 aa23.84■■□□□ 1.41
TNFRSF1A-205ENST00000534885 ZFPM1Q8IX07 1006 aa23.84■■□□□ 1.41
TNFRSF1A-205ENST00000534885 NSUN7Q8NE18 718 aaKnown RBP23.84■■□□□ 1.41
TNFRSF1A-205ENST00000534885 FOXD4L4Q8WXT5 416 aaPredicted RBP23.84■■□□□ 1.41
TNFRSF1A-205ENST00000534885 CCDC69A6NI79 296 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SYT1P21579 422 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 IDI2Q9BXS1 227 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 FAM198AQ9UFP1 575 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 HDAC9Q9UKV0 1011 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SPDYE2BA6NHP3 402 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 PPFIA3O75145 1194 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 BRD1O95696 1058 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SPDYE6P0CI01 402 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 CDK8P49336 464 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 TCP10Q12799 353 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SMARCC2Q8TAQ2 1214 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 LLPHQ9BRT6 129 aaKnown RBP23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 SLC12A7Q9Y666 1083 aa23.83■■□□□ 1.41
TNFRSF1A-205ENST00000534885 RASA1P20936 1047 aa23.82■■□□□ 1.4
TNFRSF1A-205ENST00000534885 TFAP4Q01664 338 aa23.82■■□□□ 1.4
TNFRSF1A-205ENST00000534885 TTC6Q86TZ1 520 aa23.82■■□□□ 1.4
TNFRSF1A-205ENST00000534885 DDX11Q96FC9 970 aa23.82■■□□□ 1.4
TNFRSF1A-205ENST00000534885 PTPDC1A2A3K4 754 aa23.82■■□□□ 1.4
TNFRSF1A-205ENST00000534885 ZBTB43O43298 467 aa23.82■■□□□ 1.4
TNFRSF1A-205ENST00000534885 METAP2P50579 478 aaKnown RBP eCLIP23.82■■□□□ 1.4
TNFRSF1A-205ENST00000534885 ARHGAP27Q6ZUM4 889 aa23.82■■□□□ 1.4
TNFRSF1A-205ENST00000534885 CCDC144CPQ8IYA2 1237 aa23.82■■□□□ 1.4
TNFRSF1A-205ENST00000534885 TNIP1Q15025 636 aa23.81■■□□□ 1.4
TNFRSF1A-205ENST00000534885 DLGAP5Q15398 846 aa23.81■■□□□ 1.4
TNFRSF1A-205ENST00000534885 TMTC2Q8N394 836 aa23.81■■□□□ 1.4
TNFRSF1A-205ENST00000534885 SHTN1A0MZ66 631 aa23.8■■□□□ 1.4
TNFRSF1A-205ENST00000534885 FZD9O00144 591 aa23.8■■□□□ 1.4
TNFRSF1A-205ENST00000534885 STX6O43752 255 aa23.8■■□□□ 1.4
TNFRSF1A-205ENST00000534885 GABPAQ06546 454 aa23.8■■□□□ 1.4
TNFRSF1A-205ENST00000534885 CDC27P30260 824 aa23.8■■□□□ 1.4
TNFRSF1A-205ENST00000534885 IFIT1BQ5T764 474 aaKnown RBP23.8■■□□□ 1.4
TNFRSF1A-205ENST00000534885 ZNF444Q8N0Y2 327 aaPredicted RBP23.8■■□□□ 1.4
TNFRSF1A-205ENST00000534885 ZNF287Q9HBT7 754 aa23.8■■□□□ 1.4
TNFRSF1A-205ENST00000534885 MYH8P13535 1937 aa23.8■■□□□ 1.4
TNFRSF1A-205ENST00000534885 SIPA1L1O43166 1804 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms