RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 MEI1Q5TIA1 1274 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 KIAA0319Q5VV43 1072 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 COL23A1Q86Y22 540 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 TRIM22Q8IYM9 498 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 CCDC155Q8N6L0 562 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 OR13H1Q8NG92 308 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 CAPNS2Q96L46 248 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 GPR101Q96P66 508 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 SUV39H2Q9H5I1 410 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 KANSL3Q9P2N6 904 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 SALL4Q9UJQ4 1053 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 AKAP12Q02952 1782 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 USP31Q70CQ4 1352 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 CENPFP49454 3210 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 A0A1W2PP55 124 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 GADD45BO75293 160 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 USP17L7P0C7H9 530 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 PEAR1Q5VY43 1037 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 GLIS3Q8NEA6 775 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 TGIF2Q9GZN2 237 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 FAM8A1Q9UBU6 413 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 ABT1Q9ULW3 272 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 KNDC1Q76NI1 1749 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 CRYBG1Q9Y4K1 1723 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 NRXN1Q9ULB1 1477 aa6.78□□□□□ -1.32
ECHDC1-223ENST00000534442 NHSQ6T4R5 1651 aa6.77□□□□□ -1.32
ECHDC1-223ENST00000534442 H7C1W4 665 aa6.77□□□□□ -1.33
ECHDC1-223ENST00000534442 RARAP10276 462 aa6.77□□□□□ -1.33
ECHDC1-223ENST00000534442 NFKB1P19838 968 aa6.77□□□□□ -1.33
ECHDC1-223ENST00000534442 PTPN12Q05209 780 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-223ENST00000534442 ZNF837Q96EG3 531 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-223ENST00000534442 ABHD17AQ96GS6 310 aa6.77□□□□□ -1.33
ECHDC1-223ENST00000534442 SRCIN1Q9C0H9 1055 aa6.77□□□□□ -1.33
ECHDC1-223ENST00000534442 MARK1Q9P0L2 795 aa6.77□□□□□ -1.33
ECHDC1-223ENST00000534442 N4BP2Q86UW6 1770 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-223ENST00000534442 TRPM1Q7Z4N2 1603 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 KIAA1551Q9HCM1 1747 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 AOC2O75106 756 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 MAP3K6O95382 1288 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 CD33P20138 364 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 SPEM2Q0P670 501 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 LAPTM4AQ15012 233 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 TAF1CQ15572 869 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 CYP4F22Q6NT55 531 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 ALYREFQ86V81 257 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 SREK1Q8WXA9 508 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 TRIM47Q96LD4 638 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 TINF2Q9BSI4 451 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 ACBD3Q9H3P7 528 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 TLR7Q9NYK1 1049 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 STXBP5LQ9Y2K9 1186 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 KANK1Q14678 1352 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 EYSQ5T1H1 3165 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 USP6P35125 1406 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 NAIPQ13075 1403 aa6.76□□□□□ -1.33
ECHDC1-223ENST00000534442 CHD8Q9HCK8 2581 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 QRICH2Q9H0J4 1663 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 KIF4AO95239 1232 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 TSPY4P0CV99 314 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 TSPY10P0CW01 314 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 HOXD8P13378 290 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 EDN3P14138 238 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 ACPPP15309 386 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 ITGA6P23229 1130 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 ECE1P42892 770 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 RACK1P63244 317 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 ZNF394Q53GI3 561 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 RAB44Q7Z6P3 723 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 C3orf58Q8NDZ4 430 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 GTPBP3Q969Y2 492 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 DRC1Q96MC2 740 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 CNTNAP3BQ96NU0 1288 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 P2RX7Q99572 595 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 CNTNAP3Q9BZ76 1288 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 SENP2Q9HC62 589 aa6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 SRA1Q9HD15 236 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-223ENST00000534442 BTAF1O14981 1849 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 A0A0G2JLW4 131 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 PHF20L1A8MW92 1017 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 SNRPBP14678 240 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 SOX18P35713 384 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 ST13P50502 369 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 KIFC2Q96AC6 838 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 ACSBG1Q96GR2 724 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 GMCL1Q96IK5 515 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 PNMA5Q96PV4 448 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 TCF12Q99081 682 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 EHD4Q9H223 541 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 CCSER2Q9H7U1 834 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 GMPR2Q9P2T1 348 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 ATXN7L1Q9ULK2 861 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 PCDHGB7Q9Y5F8 929 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 SBF1O95248 1867 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 PRUNE2Q8WUY3 3088 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 COL18A1P39060 1754 aa6.74□□□□□ -1.33
ECHDC1-223ENST00000534442 ALS2Q96Q42 1657 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms