RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 PTPN18Q99952 460 aa25.84■■□□□ 1.73
PKP3-211ENST00000534401 TSKSQ9UJT2 592 aa25.84■■□□□ 1.73
PKP3-211ENST00000534401 KCNH4Q9UQ05 1017 aa25.84■■□□□ 1.73
PKP3-211ENST00000534401 PHIPQ8WWQ0 1821 aa25.84■■□□□ 1.73
PKP3-211ENST00000534401 DOCK1Q14185 1865 aa25.83■■□□□ 1.73
PKP3-211ENST00000534401 IGF2BP3O00425 579 aaKnown RBP eCLIP25.83■■□□□ 1.73
PKP3-211ENST00000534401 ALDH1A1P00352 501 aa25.83■■□□□ 1.73
PKP3-211ENST00000534401 GTF2A2P52657 109 aa25.83■■□□□ 1.73
PKP3-211ENST00000534401 SCYL3Q8IZE3 742 aa25.83■■□□□ 1.73
PKP3-211ENST00000534401 OTUD5Q96G74 571 aa25.83■■□□□ 1.73
PKP3-211ENST00000534401 IRF6O14896 467 aa25.82■■□□□ 1.72
PKP3-211ENST00000534401 CHGBP05060 677 aa25.82■■□□□ 1.72
PKP3-211ENST00000534401 SLFNL1Q499Z3 407 aa25.82■■□□□ 1.72
PKP3-211ENST00000534401 ZSCAN25Q6NSZ9 544 aa25.82■■□□□ 1.72
PKP3-211ENST00000534401 BRI3BPQ8WY22 251 aa25.82■■□□□ 1.72
PKP3-211ENST00000534401 DNAJC18Q9H819 358 aa25.82■■□□□ 1.72
PKP3-211ENST00000534401 PALD1Q9ULE6 856 aa25.82■■□□□ 1.72
PKP3-211ENST00000534401 NUCB1Q02818 461 aa25.81■■□□□ 1.72
PKP3-211ENST00000534401 RRP1BQ14684 758 aaKnown RBP25.81■■□□□ 1.72
PKP3-211ENST00000534401 CRNKL1Q9BZJ0 848 aaKnown RBP25.81■■□□□ 1.72
PKP3-211ENST00000534401 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.81■■□□□ 1.72
PKP3-211ENST00000534401 PTPRAP18433 802 aa25.8■■□□□ 1.72
PKP3-211ENST00000534401 PDE1AP54750 535 aa25.8■■□□□ 1.72
PKP3-211ENST00000534401 LCORLQ8N3X6 602 aa25.8■■□□□ 1.72
PKP3-211ENST00000534401 EHD4Q9H223 541 aa25.8■■□□□ 1.72
PKP3-211ENST00000534401 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.8■■□□□ 1.72
PKP3-211ENST00000534401 FAM196BA6NMK8 535 aa25.79■■□□□ 1.72
PKP3-211ENST00000534401 USP5P45974 858 aa25.79■■□□□ 1.72
PKP3-211ENST00000534401 ZBTB47Q9UFB7 747 aaPredicted RBP25.79■■□□□ 1.72
PKP3-211ENST00000534401 PTPRFP10586 1907 aa25.78■■□□□ 1.72
PKP3-211ENST00000534401 CXCL11O14625 94 aa25.78■■□□□ 1.72
PKP3-211ENST00000534401 ZFYP08048 801 aaPredicted RBP25.78■■□□□ 1.72
PKP3-211ENST00000534401 CETPP11597 493 aa25.78■■□□□ 1.72
PKP3-211ENST00000534401 CAP2P40123 477 aa25.78■■□□□ 1.72
PKP3-211ENST00000534401 SNAPC2Q13487 334 aa25.78■■□□□ 1.72
PKP3-211ENST00000534401 MOGSQ13724 837 aa25.78■■□□□ 1.72
PKP3-211ENST00000534401 CHD1LQ86WJ1 897 aa25.78■■□□□ 1.72
PKP3-211ENST00000534401 PUS7LQ9H0K6 701 aaKnown RBP25.78■■□□□ 1.72
PKP3-211ENST00000534401 ZCCHC17Q9NP64 241 aaKnown RBP25.78■■□□□ 1.72
PKP3-211ENST00000534401 DCP1AQ9NPI6 582 aaPredicted RBP25.78■■□□□ 1.72
PKP3-211ENST00000534401 ATAD5Q96QE3 1844 aa25.78■■□□□ 1.72
PKP3-211ENST00000534401 NAV1Q8NEY1 1877 aa25.78■■□□□ 1.72
PKP3-211ENST00000534401 CCL15-CCL14A0A0B4J2E2 113 aa25.77■■□□□ 1.72
PKP3-211ENST00000534401 RNF113AO15541 343 aaKnown RBP25.77■■□□□ 1.72
PKP3-211ENST00000534401 MBD4O95243 580 aa25.77■■□□□ 1.72
PKP3-211ENST00000534401 IRX6P78412 446 aaPredicted RBP25.77■■□□□ 1.72
PKP3-211ENST00000534401 CCL15Q16663 113 aa25.77■■□□□ 1.72
PKP3-211ENST00000534401 LNPKQ9C0E8 428 aa25.77■■□□□ 1.72
PKP3-211ENST00000534401 R3HDMLQ9H3Y0 253 aa25.77■■□□□ 1.72
PKP3-211ENST00000534401 ARMT1Q9H993 441 aa25.77■■□□□ 1.72
PKP3-211ENST00000534401 SAP30BPQ9UHR5 308 aaKnown RBP25.77■■□□□ 1.72
PKP3-211ENST00000534401 AFG3L2Q9Y4W6 797 aa25.77■■□□□ 1.72
PKP3-211ENST00000534401 TBC1D8O95759 1140 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 HLA-DOAP06340 250 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 OTUD7BQ6GQQ9 843 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 TATDN1Q6P1N9 297 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 TTC6Q86TZ1 520 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 TICAM2Q86XR7 235 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 OSBPL3Q9H4L5 887 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 ATP8A2Q9NTI2 1148 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 GINM1Q9NU53 330 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 TAOK2Q9UL54 1235 aa25.76■■□□□ 1.71
PKP3-211ENST00000534401 GABPAQ06546 454 aa25.75■■□□□ 1.71
PKP3-211ENST00000534401 APPBP2Q92624 585 aa25.75■■□□□ 1.71
PKP3-211ENST00000534401 OSBP2Q969R2 916 aa25.75■■□□□ 1.71
PKP3-211ENST00000534401 PICK1Q9NRD5 415 aa25.75■■□□□ 1.71
PKP3-211ENST00000534401 ZHX2Q9Y6X8 837 aa25.75■■□□□ 1.71
PKP3-211ENST00000534401 PRKAB2O43741 272 aa25.74■■□□□ 1.71
PKP3-211ENST00000534401 PLCD1P51178 756 aa25.74■■□□□ 1.71
PKP3-211ENST00000534401 FAM43AQ8N2R8 423 aa25.74■■□□□ 1.71
PKP3-211ENST00000534401 SDR42E1Q8WUS8 393 aa25.74■■□□□ 1.71
PKP3-211ENST00000534401 STRBPQ96SI9 672 aaKnown RBP25.74■■□□□ 1.71
PKP3-211ENST00000534401 SERPINB13Q9UIV8 391 aa25.74■■□□□ 1.71
PKP3-211ENST00000534401 BAZ2AQ9UIF9 1905 aaKnown RBP25.74■■□□□ 1.71
PKP3-211ENST00000534401 BTBD19C9JJ37 291 aa25.73■■□□□ 1.71
PKP3-211ENST00000534401 GPR25O00155 361 aa25.73■■□□□ 1.71
PKP3-211ENST00000534401 JAG1P78504 1218 aa25.73■■□□□ 1.71
PKP3-211ENST00000534401 LRRFIP1Q32MZ4 808 aaKnown RBP25.73■■□□□ 1.71
PKP3-211ENST00000534401 PLEKHM2Q8IWE5 1019 aa25.73■■□□□ 1.71
PKP3-211ENST00000534401 TBC1D2Q9BYX2 928 aa25.73■■□□□ 1.71
PKP3-211ENST00000534401 A0A0G2JLL6 359 aaPredicted RBP25.72■■□□□ 1.71
PKP3-211ENST00000534401 B4GALNT3Q6L9W6 998 aa25.72■■□□□ 1.71
PKP3-211ENST00000534401 PRRT2Q7Z6L0 340 aaPredicted RBP25.72■■□□□ 1.71
PKP3-211ENST00000534401 ANKRD23Q86SG2 305 aa25.71■■□□□ 1.71
PKP3-211ENST00000534401 CRACR2BQ8N4Y2 399 aaPredicted RBP25.71■■□□□ 1.71
PKP3-211ENST00000534401 EVI5LQ96CN4 794 aa25.71■■□□□ 1.71
PKP3-211ENST00000534401 MCM9Q9NXL9 1143 aa25.71■■□□□ 1.71
PKP3-211ENST00000534401 ASNSP08243 561 aa25.7■■□□□ 1.7
PKP3-211ENST00000534401 CRHR2Q13324 411 aa25.7■■□□□ 1.7
PKP3-211ENST00000534401 ZMYM1Q5SVZ6 1142 aa25.7■■□□□ 1.7
PKP3-211ENST00000534401 GPAT2Q6NUI2 795 aa25.7■■□□□ 1.7
PKP3-211ENST00000534401 GIMAP6Q6P9H5 292 aa25.7■■□□□ 1.7
PKP3-211ENST00000534401 WDR18Q9BV38 432 aa25.7■■□□□ 1.7
PKP3-211ENST00000534401 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.7■■□□□ 1.7
PKP3-211ENST00000534401 USP17L5A8MUK1 530 aa25.69■■□□□ 1.7
PKP3-211ENST00000534401 SHMT1P34896 483 aa25.69■■□□□ 1.7
PKP3-211ENST00000534401 ZNF296Q8WUU4 475 aaPredicted RBP25.69■■□□□ 1.7
PKP3-211ENST00000534401 GSG1L2A8MUP6 293 aa25.68■■□□□ 1.7
PKP3-211ENST00000534401 POLR3DP05423 398 aaPredicted RBP25.68■■□□□ 1.7
PKP3-211ENST00000534401 EVX2Q03828 476 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms