RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 TFAP4Q01664 338 aa19.42■□□□□ 0.7
PHRF1-206ENST00000534320 UBXN1Q04323 297 aa19.42■□□□□ 0.7
PHRF1-206ENST00000534320 TGFBRAP1Q8WUH2 860 aa19.42■□□□□ 0.7
PHRF1-206ENST00000534320 KIDINS220Q9ULH0 1771 aa19.42■□□□□ 0.7
PHRF1-206ENST00000534320 ANTXR1Q9H6X2 564 aa19.42■□□□□ 0.7
PHRF1-206ENST00000534320 PIGBQ92521 554 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 ZNF335Q9H4Z2 1342 aaPredicted RBP19.41■□□□□ 0.7
PHRF1-206ENST00000534320 DESP17661 470 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 TBC1D22AQ8WUA7 517 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 JDP2Q8WYK2 163 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 MMRN2Q9H8L6 949 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 CUL4AQ13619 759 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 FAM47AQ5JRC9 791 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 NAP1L4Q99733 375 aaKnown RBP19.41■□□□□ 0.7
PHRF1-206ENST00000534320 TMCO5BA8MYB1 307 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 NLRP10Q86W26 655 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 SDR42E1Q8WUS8 393 aa19.41■□□□□ 0.7
PHRF1-206ENST00000534320 PDIA3P30101 505 aaKnown RBP19.4■□□□□ 0.7
PHRF1-206ENST00000534320 ADD1P35611 737 aaKnown RBP19.4■□□□□ 0.7
PHRF1-206ENST00000534320 hCG_1642624A0A1W2PR95 340 aa19.4■□□□□ 0.7
PHRF1-206ENST00000534320 USPL1Q5W0Q7 1092 aa19.4■□□□□ 0.7
PHRF1-206ENST00000534320 ZMYM6O95789 1325 aa19.4■□□□□ 0.7
PHRF1-206ENST00000534320 GPT2Q8TD30 523 aa19.4■□□□□ 0.7
PHRF1-206ENST00000534320 USP28Q96RU2 1077 aa19.4■□□□□ 0.7
PHRF1-206ENST00000534320 ADALQ6DHV7 355 aa19.4■□□□□ 0.7
PHRF1-206ENST00000534320 CHAMP1Q96JM3 812 aa19.4■□□□□ 0.7
PHRF1-206ENST00000534320 VPS54Q9P1Q0 977 aa19.4■□□□□ 0.7
PHRF1-206ENST00000534320 ZNF75DP51815 510 aa19.39■□□□□ 0.7
PHRF1-206ENST00000534320 NLRP12P59046 1061 aa19.39■□□□□ 0.7
PHRF1-206ENST00000534320 SCRN1Q12765 414 aa19.39■□□□□ 0.7
PHRF1-206ENST00000534320 SV2BQ7L1I2 683 aa19.39■□□□□ 0.7
PHRF1-206ENST00000534320 WWC3Q9ULE0 1092 aa19.39■□□□□ 0.7
PHRF1-206ENST00000534320 IGKV5-2P06315 115 aa19.39■□□□□ 0.69
PHRF1-206ENST00000534320 NAA15Q9BXJ9 866 aaKnown RBP19.39■□□□□ 0.69
PHRF1-206ENST00000534320 H7C1W4 665 aa19.39■□□□□ 0.69
PHRF1-206ENST00000534320 MTX1Q13505 466 aa19.39■□□□□ 0.69
PHRF1-206ENST00000534320 UBE4AQ14139 1066 aa19.39■□□□□ 0.69
PHRF1-206ENST00000534320 ZSCAN10Q96SZ4 725 aaPredicted RBP19.39■□□□□ 0.69
PHRF1-206ENST00000534320 LZTS2Q9BRK4 669 aa19.39■□□□□ 0.69
PHRF1-206ENST00000534320 CHMP4BP1P59074 171 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 RBM26Q5T8P6 1007 aaKnown RBP19.38■□□□□ 0.69
PHRF1-206ENST00000534320 SPECC1LQ69YQ0 1117 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 MLKLQ8NB16 471 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 KIAA1210Q9ULL0 1709 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 MED23Q9ULK4 1368 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 CCNT1O60563 726 aaKnown RBP19.38■□□□□ 0.69
PHRF1-206ENST00000534320 ERVV-1B6SEH8 477 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 M0R2C6 588 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 CCDC172P0C7W6 258 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 CTNND2Q9UQB3 1225 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 FANCBQ8NB91 859 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 FERMT2Q96AC1 680 aa19.38■□□□□ 0.69
PHRF1-206ENST00000534320 POLR1AO95602 1720 aaPredicted RBP19.37■□□□□ 0.69
PHRF1-206ENST00000534320 CCDC174Q6PII3 467 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 CEP63Q96MT8 703 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 PIK3C2BO00750 1634 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 SLU7O95391 586 aaKnown RBP19.37■□□□□ 0.69
PHRF1-206ENST00000534320 KRT83P78385 493 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 FANCCQ00597 558 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 TNKSO95271 1327 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 MFSD14BQ5SR56 506 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 KRT25Q7Z3Z0 450 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 MYO3AQ8NEV4 1616 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 H0YIN7 160 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 NONOQ15233 471 aaKnown RBP eCLIP19.37■□□□□ 0.693e-7■■■■□ 23.9
PHRF1-206ENST00000534320 CNGA4Q8IV77 575 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 BICD1Q96G01 975 aa19.37■□□□□ 0.69
PHRF1-206ENST00000534320 NR1I2O75469 434 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 KRT13P13646 458 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 IFFO1Q0D2I5 559 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 IFI16Q16666 785 aaKnown RBP19.36■□□□□ 0.69
PHRF1-206ENST00000534320 SRRTQ9BXP5 876 aaKnown RBP19.36■□□□□ 0.69
PHRF1-206ENST00000534320 SEC31BQ9NQW1 1179 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 LUC7L2Q9Y383 392 aaKnown RBP19.36■□□□□ 0.69
PHRF1-206ENST00000534320 ARID4AP29374 1257 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-206ENST00000534320 NOSTRINQ8IVI9 506 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 CMTR1Q8N1G2 835 aaKnown RBP19.36■□□□□ 0.69
PHRF1-206ENST00000534320 GCOM1H8Y6P7 765 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-206ENST00000534320 FAM13AO94988 1023 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 MYZAPP0CAP1 466 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 PPP1R2P41236 205 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 POSTNQ15063 836 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 EPHA10Q5JZY3 1008 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 CCDC42Q96M95 316 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 RRAGDQ9NQL2 400 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-206ENST00000534320 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 TBC1D5Q92609 795 aa19.36■□□□□ 0.69
PHRF1-206ENST00000534320 BAG1Q99933 345 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-206ENST00000534320 CCDC94Q9BW85 323 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-206ENST00000534320 CTAGE15A4D2H0 777 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 CTAGE8P0CG41 777 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 POLD1P28340 1107 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 CCT6AP40227 531 aaKnown RBP19.35■□□□□ 0.69
PHRF1-206ENST00000534320 CKAP4Q07065 602 aaKnown RBP19.35■□□□□ 0.69
PHRF1-206ENST00000534320 CTAGE6Q86UF2 777 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 CTAGE4Q8IX94 777 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 SH2D4AQ9H788 454 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 NRXN1Q9ULB1 1477 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 AKR1B15C9JRZ8 316 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms